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From: Mel Flynn <mel.flynn+fbsd.questions@mailing.thruhere.net>
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Date: Tue, 8 Sep 2009 22:38:22 +0200
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Cc: jaymax <jaymax36@gmail.com>
Subject: Re: Inconsistency in root partition size
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On Tuesday 08 September 2009 04:14:55 jaymax wrote:

> > restore -tf /disk03/dump/root2.dump > rootrestore-0.lst
>
> To my surprise rootrestore-0.lst contains a whole listings of ./usr/ files
> ex.
>
> >       2926      ./usr/include/bsnmp/snmpmod.h
> >       2927      ./usr/include/bsnmp/snmp_atm.h
>
> Now /usr is on a separate and distinct partition
>
> > /dev/ad0s1f  36205990  25765232  7544280    77%    /usr
>
> Hope someone can make some sense of this.

This is exactly what I figured. Some files are hiding behind a mount point. 
The got there most likely, cause you did make installworld without /usr 
mounted, which would happen if you have the FreeBSD source tree on a different 
location, reboot into single user mode, only mount the source tree and do 
installworld.

To repair, reboot into single user. Run the following commands:
fsck -y /
mount -u -o rw /
rm -rf /usr/*
exit

This should delete the offending files.
-- 
Mel