From owner-freebsd-python@freebsd.org  Sun Feb  5 08:04:05 2017
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From: portscout@FreeBSD.org
To: python@freebsd.org
Subject: FreeBSD ports you maintain which are out of date
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Dear port maintainer,

The portscout new distfile checker has detected that one or more of your
ports appears to be out of date. Please take the opportunity to check
each of the ports listed below, and if possible and appropriate,
submit/commit an update. If any ports have already been updated, you can
safely ignore the entry.

You will not be e-mailed again for any of the port/version combinations
below.

Full details can be found at the following URL:
http://portscout.freebsd.org/python@freebsd.org.html


Port                                            | Current version | New version
------------------------------------------------+-----------------+------------
databases/py-dbutils                            | 1.1             | 1.1.1
------------------------------------------------+-----------------+------------


If any of the above results are invalid, please check the following page
for details on how to improve portscout's detection and selection of
distfiles on a per-port basis:

http://portscout.freebsd.org/info/portscout-portconfig.txt

Thanks.

From owner-freebsd-python@freebsd.org  Sun Feb  5 09:04:52 2017
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Subject: [Bug 216585] [PATCH] www/py-pelican: Concurrent install is
 ineffective without PKGNAMEPREFIX
Date: Sun, 05 Feb 2017 09:04:52 +0000
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216585
Bug 216585 depends on bug 215201, which changed state.

Bug 215201 Summary: [PATCH] www/py-pelican: build fails on RUN_DEPENDS non-=
default python
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D215201

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|New                         |Closed
         Resolution|---                         |FIXED

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From owner-freebsd-python@freebsd.org  Sun Feb  5 14:38:36 2017
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Subject: Re: www/py-pelican maintainer timeout on 215201
To: demon@FreeBSD.org
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 <0cc01133-4839-a3b7-926e-db858b4229eb@saltant.com>
Cc: FreeBSD Python List <freebsd-python@FreeBSD.org>, jlaffaye@FreeBSD.org
From: "John W. O'Brien" <john@saltant.com>
Organization: Saltant Solutions
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From: "John W. O'Brien" <john@saltant.com>
To: demon@FreeBSD.org
Cc: FreeBSD Python List <freebsd-python@FreeBSD.org>, jlaffaye@FreeBSD.org
Message-ID: <0913b215-f75d-b750-cc2d-b53fb2889263@saltant.com>
Subject: Re: www/py-pelican maintainer timeout on 215201
References: <2ad55501-6287-245e-b4c0-1a04f5d9358f@saltant.com>
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On 2/4/17 15:56, John W. O'Brien wrote:
> On 1/7/17 19:11, John W. O'Brien wrote:
>> Are there any friendly neighborhood Python-oriented committers who wou=
ld
>> be willing to pick up ports/215201, open and awaiting maintainer
>> feedback since 2016-12-10 (4 weeks)?
>>
>>     [PATCH] www/py-pelican: build fails on RUN_DEPENDS non-default pyt=
hon
>>     https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D215201
>=20
> Ping?
>=20
> 8 weeks.
>=20

Thank you, demon!

> Author: demon
> Date: Sun Feb  5 09:03:41 UTC 2017
> New revision: 433387
> URL: https://svnweb.freebsd.org/changeset/ports/433387



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From owner-freebsd-python@freebsd.org  Sun Feb  5 16:13:38 2017
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Subject: [Bug 216579] [patch] devel/py-boto: Enable concurrent installs
Date: Sun, 05 Feb 2017 16:13:38 +0000
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216579

--- Comment #5 from commit-hook@freebsd.org ---
A commit references this bug:

Author: rm
Date: Sun Feb  5 16:13:31 UTC 2017
New revision: 433425
URL: https://svnweb.freebsd.org/changeset/ports/433425

Log:
  devel/py-boto: enable concurrent install

  Enable concurrent feature to let boto be installed simultaneously both
  with python2 and python3.

  PR:           216579
  Submitted by: John W. O'Brien <john@saltant.com>

Changes:
  head/devel/py-boto/Makefile

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Subject: [Bug 216579] [patch] devel/py-boto: Enable concurrent installs
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216579

Ruslan Makhmatkhanov <rm@FreeBSD.org> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
         Resolution|---                         |FIXED
             Status|Open                        |Closed

--- Comment #6 from Ruslan Makhmatkhanov <rm@FreeBSD.org> ---
Committed, thank you!

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Subject: [Bug 216583] [PATCH] devel/py-jmespath: Enable concurrent installs
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216583

Ruslan Makhmatkhanov <rm@FreeBSD.org> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
           Assignee|freebsd-ports-bugs@FreeBSD. |rm@FreeBSD.org
                   |org                         |
                 CC|                            |rm@FreeBSD.org

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From owner-freebsd-python@freebsd.org  Sun Feb  5 21:00:16 2017
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To view an individual PR, use:
  https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=(Bug Id).

The following is a listing of current problems submitted by FreeBSD users,
which need special attention. These represent problem reports covering
all versions including experimental development code and obsolete releases.

Status      |    Bug Id | Description
------------+-----------+---------------------------------------------------
Open        |    205308 | devel/py-pip and devel/py-virtualenv don't aggree 
Open        |    211641 | graphics/py-mayavi mayavi2 runtime error          
Open        |    212072 | lang/python27: Fails to create package (missing p 
Open        |    204982 | [NEW PORT] mail/py-alot: Terminal MUA using notmu 

4 problems total for which you should take action.

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Subject: [Bug 216758] www/py-djblets : depends on expired www/py-django16 and
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Rene Ladan <rene@FreeBSD.org> changed:

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Rene Ladan <rene@FreeBSD.org> changed:

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           Assignee|freebsd-ports-bugs@FreeBSD. |freebsd-python@FreeBSD.org
                   |org                         |

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On Fri, Jan 27, 2017 at 11:28 AM, John Klos <john@ziaspace.com> wrote:
> Hi,
>
> I find it a little odd that a clean install of FreeBSD 11.0 on amd64
> followed by:
>
> portsnap fetch ; portsnap extract
> echo "DISABLE_LICENSES=yes" > /etc/make.conf
> echo "BATCH=yes" >> /etc/make.conf
> cd /usr/ports/emulators/virtualbox-ose
> make install clean
>
> fails. What's the recommended (and non-embarrassing) way to set up a clean
> FreeBSD installation with VirtualBox?
>
> Here's the error:
>
> ...
> /bin/ln -sf python-2.7.pc
> /usr/ports/lang/python3/work/stage/usr/local/libdata/pkgconfig/python2.pc
> ====> Compressing man pages (compress-man)
> ===>  Installing for python3-2_3
> ===>  Checking if python3 already installed
> ===>   Registering installation for python3-2_3 as automatic
> Installing python3-2_3...
> pkg-static: python3-2_3 conflicts with python2-2_3 (installs files into the
> same place).  Problematic file: /usr/local/bin/2to3-2
> *** Error code 70
>
> Stop.
> make[6]: stopped in /usr/ports/lang/python3
> *** Error code 1
>
> Stop.
> ...
>

(Add freebsd-python@, move freebsd-virtualization@ to BCC)

This is not emulators/virtualbox-ose's fault.  It's because it needs
python2 to build, but it conflictes with python3 which is installed on
your system.

We might need to check why both python2 and python3 install
/usr/local/bin/2to3-2, this should be suffixed.

FWIW, if there you have no special requirements, I would suggest you
to install pre-built packages with pkg(1).

Best,
Li-Wen

-- 
Li-Wen Hsu <lwhsu@FreeBSD.org>
https://lwhsu.org

From owner-freebsd-python@freebsd.org  Thu Feb  9 15:12:33 2017
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Subject: [Bug 216941] devel/py-logilab-common & devel/py-pytest install to
 the same files
Date: Thu, 09 Feb 2017 15:12:32 +0000
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216941

            Bug ID: 216941
           Summary: devel/py-logilab-common & devel/py-pytest install to
                    the same files
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs@FreeBSD.org
          Reporter: dvl@FreeBSD.org
                CC: python@FreeBSD.org
                CC: python@FreeBSD.org

These two ports conflict. They install the same file.  I suggest they both =
be
renamed.  I will post this ticket, then work on patches for review/approval=
.=20
If anyone else wishes to proceed on this issue before I do that, please
proceed.

Here are command run after a poudriere testport on a recent ports tree:

testport of devel/py-pytest

# pkg info -l py27-pytest-3.0.6 | grep /usr/local/bin/pytest
        /usr/local/bin/pytest
        /usr/local/bin/pytest-2.7
# cat /usr/local/bin/pytest
#!/usr/local/bin/python2.7
# EASY-INSTALL-ENTRY-SCRIPT: 'pytest=3D=3D3.0.6','console_scripts','pytest'
__requires__ =3D 'pytest=3D=3D3.0.6'
import re
import sys
from pkg_resources import load_entry_point

if __name__ =3D=3D '__main__':
    sys.argv[0] =3D re.sub(r'(-script\.pyw?|\.exe)?$', '', sys.argv[0])
    sys.exit(
        load_entry_point('pytest=3D=3D3.0.6', 'console_scripts', 'pytest')()
    )



testport of devel/py-logilab-common

# pkg info -l py27-logilab-common-1.2.2 | grep /usr/local/bin/pytest
        /usr/local/bin/pytest
        /usr/local/bin/pytest-2.7

# cat /usr/local/bin/pytest
#!/usr/local/bin/python2.7

import warnings
warnings.simplefilter('default', DeprecationWarning)

from logilab.common.pytest import run
run()

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216941

--- Comment #1 from Dan Langille <dvl@FreeBSD.org> ---
Issue raised with upstreadm pytest project:
https://github.com/pytest-dev/pytest/issues/2243

They pointed out, this has already been raised.=20
https://github.com/pytest-dev/pytest/issues/1833

No change will occur upstream.

Sounds like we must resolve it ourselves.

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 the same files
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216941

--- Comment #2 from Dan Langille <dvl@FreeBSD.org> ---
Solution is to upgrade devel/py-logilab-common to v 1.3.0 because that vers=
ion
no longer ships that script.

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216941

Dan Langille <dvl@FreeBSD.org> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|New                         |In Progress

--- Comment #3 from Dan Langille <dvl@FreeBSD.org> ---
Code review created: https://reviews.freebsd.org/D9516

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From: DTD <doug@safeport.com>
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Subject: Re: MySQLdb question
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On Thu, 26 Jan 2017, Karl Young wrote:

> DTD(doug@safeport.com)@2017.01.26 13:23:56 -0500:
>> I am using py27-MySQLdb-1.2.5 (the default) for FreeBSD 10.3
>>
>>   cmd="update ipv4 set s8='%s',s16='%s',s24='%s' where ip='%s'" % (s8,s16,s24,row[0])
>>   c.execute(cmd)
>
> When you say that it isn't working, I assume you mean it's not updating
> any rows?  To see if that's the case, you can assign the return from
> execute and print the result, and print it out.
>
> numrows = c.execute(cmd)
> print numrows
>
> Or use the rowcount attr of the cursor
>
> print c.rowcount
>
> If it's showing 0 rows, try running select where
>
> select * where ip='1.186.248.251
>
> Is it possible you're connecting to a different host/db than you're
> using for your manual SQL?

Karl, the issue is InnoDB and perhaps MySQL changes in 5.6.34. Using the cli 
autocommit is on by default and using python it is not. A commit must be done 
after a series of updates. db.close apparently does not do a commit. This 
behavior is somewhat masked in other program as a select seems to cause the 
commit to be done. I don't know if db.close should do a commit or not.

Thanks again for the response.

Doug

_____
Douglas Denault
http://www.safeport.com
doug@safeport.com
Voice: 301-217-9220
   Fax: 301-217-9277

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Date: Thu, 9 Feb 2017 09:30:04 -0800
From: Karl Young <karly@kipshouse.org>
To: DTD <doug@safeport.com>
Cc: python@FreeBSD.org
Subject: Re: MySQLdb question
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DTD(doug@safeport.com)@2017.02.09 11:11:44 -0500:
> On Thu, 26 Jan 2017, Karl Young wrote:
> 
> >DTD(doug@safeport.com)@2017.01.26 13:23:56 -0500:
> >>I am using py27-MySQLdb-1.2.5 (the default) for FreeBSD 10.3
> >>
> >>  cmd="update ipv4 set s8='%s',s16='%s',s24='%s' where ip='%s'" % (s8,s16,s24,row[0])
> >>  c.execute(cmd)
> >
> >When you say that it isn't working, I assume you mean it's not updating
> >any rows?  To see if that's the case, you can assign the return from
> >execute and print the result, and print it out.
> >
> >numrows = c.execute(cmd)
> >print numrows
> >
> >Or use the rowcount attr of the cursor
> >
> >print c.rowcount
> >
> >If it's showing 0 rows, try running select where
> >
> >select * where ip='1.186.248.251
> >
> >Is it possible you're connecting to a different host/db than you're
> >using for your manual SQL?
> 
> Karl, the issue is InnoDB and perhaps MySQL changes in 5.6.34. Using
> the cli autocommit is on by default and using python it is not. A
> commit must be done after a series of updates. db.close apparently
> does not do a commit. This behavior is somewhat masked in other
> program as a select seems to cause the commit to be done. I don't
> know if db.close should do a commit or not.
> 
> Thanks again for the response.
> 
> Doug

Glad you found the cause, and thanks for posting it.  I could see that
biting me some time.

Look like that's expected behavior, according to this thread:.

http://stackoverflow.com/questions/384228/database-does-not-update-automatically-with-mysql-and-python

So your choice would be to enable autocommit or always commit before close.

Regards

-karl



> 
> _____
> Douglas Denault
> http://www.safeport.com
> doug@safeport.com
> Voice: 301-217-9220
>   Fax: 301-217-9277
> _______________________________________________
> freebsd-python@freebsd.org mailing list
> https://lists.freebsd.org/mailman/listinfo/freebsd-python
> To unsubscribe, send any mail to "freebsd-python-unsubscribe@freebsd.org"

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From: bugzilla-noreply@freebsd.org
To: python@FreeBSD.org
Subject: [Bug 216953] devel/py-setuptools: egg_info fails under python 3.4.6
 on nonexistent MANIFEST graft
Date: Fri, 10 Feb 2017 01:03:47 +0000
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216953

            Bug ID: 216953
           Summary: devel/py-setuptools: egg_info fails under python 3.4.6
                    on nonexistent MANIFEST graft
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: python@FreeBSD.org
          Reporter: john@saltant.com
          Assignee: python@FreeBSD.org
             Flags: maintainer-feedback?(python@FreeBSD.org)

Created attachment 179814
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D179814&action=
=3Dedit
Terminal capture showing passing and failing examples

When the MANIFEST.in file contains a graft statement that refers to a direc=
tory
that does not exist, the egg_info command will fail when run under python
3.4.6.

Expected behavior:

    setuptools warns on the nonexistent directory

Observed behavior:

    setuptools exits with an error on the nonexistent directory due to an
unhandled `FileNotFoundError` exception

How to reproduce:

    export DISTUTILS_DEBUG=3Dyes
    echo "graft nope" > MANIFEST.in
    python3.4 \
        -c "from setuptools import setup; setup(name=3D'x', version=3D'0.1.=
0')" \
        sdist

See the attached sample output comparing output between `distutils.core.set=
up`
and `setuptools.setup` across all versions of python currently supported on
FreeBSD. Only the combination of `setuptools` with python 3.4.6 exhibit this
problem.

N.B. I believe the underlying problem is where `setuptools.commands.egg_inf=
o`
uses `distutils.filelist.findall`. I chose to demonstrate the problem with =
the
sdist command because that is the only `distutils` command that uses
`distutils.filelist.findall`.

See some background on this bug on the freebsd-python list [0].

[0] https://lists.freebsd.org/pipermail/freebsd-python/2017-January/011524.=
html

--=20
You are receiving this mail because:
You are the assignee for the bug.=

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From: bugzilla-noreply@freebsd.org
To: python@FreeBSD.org
Subject: maintainer-feedback requested: [Bug 216953] devel/py-setuptools:
 egg_info fails under python 3.4.6 on nonexistent MANIFEST graft
Date: Fri, 10 Feb 2017 01:03:47 +0000
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John W. O'Brien <john@saltant.com> has reassigned Bugzilla Automation
<bugzilla@FreeBSD.org>'s request for maintainer-feedback to FreeBSD Python
<python@FreeBSD.org>:
Bug 216953: devel/py-setuptools: egg_info fails under python 3.4.6 on
nonexistent MANIFEST graft
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216953



--- Description ---
Created attachment 179814
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D179814&action=
=3Dedit
Terminal capture showing passing and failing examples

When the MANIFEST.in file contains a graft statement that refers to a direc=
tory
that does not exist, the egg_info command will fail when run under python
3.4.6.

Expected behavior:

    setuptools warns on the nonexistent directory

Observed behavior:

    setuptools exits with an error on the nonexistent directory due to an
unhandled `FileNotFoundError` exception

How to reproduce:

    export DISTUTILS_DEBUG=3Dyes
    echo "graft nope" > MANIFEST.in
    python3.4 \
	-c "from setuptools import setup; setup(name=3D'x', version=3D'0.1.0')" \
	sdist

See the attached sample output comparing output between `distutils.core.set=
up`
and `setuptools.setup` across all versions of python currently supported on
FreeBSD. Only the combination of `setuptools` with python 3.4.6 exhibit this
problem.

N.B. I believe the underlying problem is where `setuptools.commands.egg_inf=
o`
uses `distutils.filelist.findall`. I chose to demonstrate the problem with =
the
sdist command because that is the only `distutils` command that uses
`distutils.filelist.findall`.

See some background on this bug on the freebsd-python list [0].

[0] https://lists.freebsd.org/pipermail/freebsd-python/2017-January/011524.=
html

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Subject: Re: Need help finding root cause of staging errors related to MANIFEST
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Doubly linked breadcrumbs:

devel/py-setuptools: egg_info fails under python 3.4.6 on nonexistent
MANIFEST graft
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216953


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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216941

Dan Langille <dvl@FreeBSD.org> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|In Progress                 |Closed
         Resolution|---                         |FIXED

--- Comment #4 from Dan Langille <dvl@FreeBSD.org> ---
Committed revision:
https://svnweb.freebsd.org/ports?view=3Drevision&revision=3D433793

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On Thu, Feb 9, 2017 at 12:13 PM, Li-Wen Hsu <lwhsu@freebsd.org> wrote:

> On Fri, Jan 27, 2017 at 11:28 AM, John Klos <john@ziaspace.com> wrote:
> > Hi,
> >
> > I find it a little odd that a clean install of FreeBSD 11.0 on amd64
> > followed by:
> >
> > portsnap fetch ; portsnap extract
> > echo "DISABLE_LICENSES=3Dyes" > /etc/make.conf
> > echo "BATCH=3Dyes" >> /etc/make.conf
> > cd /usr/ports/emulators/virtualbox-ose
> > make install clean
> >
> > fails. What's the recommended (and non-embarrassing) way to set up a
> clean
> > FreeBSD installation with VirtualBox?
> >
> > Here's the error:
> >
> > ...
> > /bin/ln -sf python-2.7.pc
> > /usr/ports/lang/python3/work/stage/usr/local/libdata/
> pkgconfig/python2.pc
> > =3D=3D=3D=3D> Compressing man pages (compress-man)
> > =3D=3D=3D>  Installing for python3-2_3
> > =3D=3D=3D>  Checking if python3 already installed
> > =3D=3D=3D>   Registering installation for python3-2_3 as automatic
> > Installing python3-2_3...
> > pkg-static: python3-2_3 conflicts with python2-2_3 (installs files into
> the
> > same place).  Problematic file: /usr/local/bin/2to3-2
> > *** Error code 70
> >
> > Stop.
> > make[6]: stopped in /usr/ports/lang/python3
> > *** Error code 1
> >
> > Stop.
> > ...
> >
>
> (Add freebsd-python@, move freebsd-virtualization@ to BCC)
>
> This is not emulators/virtualbox-ose's fault.  It's because it needs
> python2 to build, but it conflictes with python3 which is installed on
> your system.
>
> We might need to check why both python2 and python3 install
> /usr/local/bin/2to3-2, this should be suffixed.
>

=E2=80=8BI just checked, python2 and python3 =E2=80=8Binstall /usr/local/bi=
n/2to3-2 and
/usr/local/bin/2to3-3 by default.

Do you make any special configurations locally?

Best,
Li-Wen

--=20
Li-Wen Hsu <lwhsu@FreeBSD.org>
https://lwhsu.org