From owner-freebsd-python@freebsd.org Sun Jun 18 08:56:55 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id E8E5DD8C558 for ; Sun, 18 Jun 2017 08:56:55 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id D425F64B91 for ; Sun, 18 Jun 2017 08:56:55 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id D38BBD8C556; Sun, 18 Jun 2017 08:56:55 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id D33DDD8C555 for ; Sun, 18 Jun 2017 08:56:55 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org (portscout.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:6]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id C53B564B90 for ; Sun, 18 Jun 2017 08:56:55 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org ([127.0.1.123]) by portscout.ysv.freebsd.org (8.15.2/8.15.2) with ESMTP id v5I8utg2077215 for ; Sun, 18 Jun 2017 08:56:55 GMT (envelope-from portscout@FreeBSD.org) Received: (from portscout@localhost) by portscout.ysv.freebsd.org (8.15.2/8.15.2/Submit) id v5I8uts1077214; Sun, 18 Jun 2017 08:56:55 GMT (envelope-from portscout@FreeBSD.org) Message-Id: <201706180856.v5I8uts1077214@portscout.ysv.freebsd.org> X-Authentication-Warning: portscout.ysv.freebsd.org: portscout set sender to portscout@FreeBSD.org using -f Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain MIME-Version: 1.0 Date: Sun, 18 Jun 2017 08:56:55 +0000 From: portscout@FreeBSD.org To: python@freebsd.org Subject: FreeBSD ports you maintain which are out of date X-Mailer: portscout/0.8.1 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 18 Jun 2017 08:56:56 -0000 Dear port maintainer, The portscout new distfile checker has detected that one or more of your ports appears to be out of date. Please take the opportunity to check each of the ports listed below, and if possible and appropriate, submit/commit an update. If any ports have already been updated, you can safely ignore the entry. You will not be e-mailed again for any of the port/version combinations below. Full details can be found at the following URL: http://portscout.freebsd.org/python@freebsd.org.html Port | Current version | New version ------------------------------------------------+-----------------+------------ devel/nuitka | 0.5.26 | 0.5.26.1 ------------------------------------------------+-----------------+------------ If any of the above results are invalid, please check the following page for details on how to improve portscout's detection and selection of distfiles on a per-port basis: http://portscout.freebsd.org/info/portscout-portconfig.txt Thanks. From owner-freebsd-python@freebsd.org Sun Jun 18 18:29:12 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 25E4FD8B606 for ; Sun, 18 Jun 2017 18:29:12 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 0F51A77CDA for ; Sun, 18 Jun 2017 18:29:12 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: by mailman.ysv.freebsd.org (Postfix) id 0B7E6D8B604; Sun, 18 Jun 2017 18:29:12 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 074F7D8B603; Sun, 18 Jun 2017 18:29:12 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (troutmask.apl.washington.edu [128.95.76.21]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "troutmask", Issuer "troutmask" (not verified)) by mx1.freebsd.org (Postfix) with ESMTPS id E111477CD8; Sun, 18 Jun 2017 18:29:11 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (localhost [127.0.0.1]) by troutmask.apl.washington.edu (8.15.2/8.15.2) with ESMTPS id v5IIT56x067885 (version=TLSv1.2 cipher=DHE-RSA-AES256-GCM-SHA384 bits=256 verify=NO); Sun, 18 Jun 2017 11:29:05 -0700 (PDT) (envelope-from sgk@troutmask.apl.washington.edu) Received: (from sgk@localhost) by troutmask.apl.washington.edu (8.15.2/8.15.2/Submit) id v5IIT5t2067884; Sun, 18 Jun 2017 11:29:05 -0700 (PDT) (envelope-from sgk) Date: Sun, 18 Jun 2017 11:29:05 -0700 From: Steve Kargl To: freebsd-ports@freebsd.org, python@FreeBSD.org Subject: [PATCH] lang/python27 -- Fix namespace collision Message-ID: <20170618182905.GA67867@troutmask.apl.washington.edu> Reply-To: sgk@troutmask.apl.washington.edu MIME-Version: 1.0 User-Agent: Mutt/1.7.2 (2016-11-26) Content-Type: text/plain; charset=us-ascii Content-Disposition: inline X-Content-Filtered-By: Mailman/MimeDel 2.1.23 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 18 Jun 2017 18:29:12 -0000 Both IEEE-754 2008 and ISO/IEC TS 18661-4 define the half-cycle trignometric functions cospi, sinpi, and tanpi. When libm (aka math.h) grows support for sinpi(x), lang/python27 has a namespace collision. The attached patch fixes the problem. -- Steve 20170425 https://www.youtube.com/watch?v=VWUpyCsUKR4 20161221 https://www.youtube.com/watch?v=IbCHE-hONow From owner-freebsd-python@freebsd.org Sun Jun 18 18:31:13 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 25016D8B6CB for ; Sun, 18 Jun 2017 18:31:13 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 0EE0177E1B for ; Sun, 18 Jun 2017 18:31:13 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: by mailman.ysv.freebsd.org (Postfix) id 0E461D8B6CA; Sun, 18 Jun 2017 18:31:13 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 0DBDED8B6C9; Sun, 18 Jun 2017 18:31:13 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (troutmask.apl.washington.edu [128.95.76.21]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "troutmask", Issuer "troutmask" (not verified)) by mx1.freebsd.org (Postfix) with ESMTPS id E61CA77E19; Sun, 18 Jun 2017 18:31:12 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (localhost [127.0.0.1]) by troutmask.apl.washington.edu (8.15.2/8.15.2) with ESMTPS id v5IIVClO067928 (version=TLSv1.2 cipher=DHE-RSA-AES256-GCM-SHA384 bits=256 verify=NO); Sun, 18 Jun 2017 11:31:12 -0700 (PDT) (envelope-from sgk@troutmask.apl.washington.edu) Received: (from sgk@localhost) by troutmask.apl.washington.edu (8.15.2/8.15.2/Submit) id v5IIVCMn067927; Sun, 18 Jun 2017 11:31:12 -0700 (PDT) (envelope-from sgk) Date: Sun, 18 Jun 2017 11:31:12 -0700 From: Steve Kargl To: freebsd-ports@freebsd.org, python@FreeBSD.org Subject: Re: [PATCH] lang/python27 -- Fix namespace collision Message-ID: <20170618183112.GA67920@troutmask.apl.washington.edu> Reply-To: sgk@troutmask.apl.washington.edu References: <20170618182905.GA67867@troutmask.apl.washington.edu> MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline In-Reply-To: <20170618182905.GA67867@troutmask.apl.washington.edu> User-Agent: Mutt/1.7.2 (2016-11-26) X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 18 Jun 2017 18:31:13 -0000 On Sun, Jun 18, 2017 at 11:29:05AM -0700, Steve Kargl wrote: > Both IEEE-754 2008 and ISO/IEC TS 18661-4 define the half-cycle > trignometric functions cospi, sinpi, and tanpi. When libm (aka > math.h) grows support for sinpi(x), lang/python27 has a namespace > collision. The attached patch fixes the problem. > Well, that's inconvenient. Seems attachments are stripped. --- Modules/mathmodule.c.orig 2017-06-18 11:09:05.938222000 -0700 +++ Modules/mathmodule.c 2017-06-18 11:09:56.248307000 -0700 @@ -71,7 +71,7 @@ static const double sqrtpi = 1.772453850905516027298167483341145182798; static double -sinpi(double x) +my_sinpi(double x) { double y, r; int n; @@ -270,7 +270,7 @@ integer. */ if (absx > 200.0) { if (x < 0.0) { - return 0.0/sinpi(x); + return 0.0/my_sinpi(x); } else { errno = ERANGE; @@ -294,7 +294,7 @@ } z = z * lanczos_g / y; if (x < 0.0) { - r = -pi / sinpi(absx) / absx * exp(y) / lanczos_sum(absx); + r = -pi / my_sinpi(absx) / absx * exp(y) / lanczos_sum(absx); r -= z * r; if (absx < 140.0) { r /= pow(y, absx - 0.5); @@ -366,7 +366,7 @@ (x-0.5)*(log(x+lanczos_g-0.5)-1); } else { - r = log(pi) - log(fabs(sinpi(absx))) - log(absx) - + r = log(pi) - log(fabs(my_sinpi(absx))) - log(absx) - (log(lanczos_sum(absx)) - lanczos_g + (absx-0.5)*(log(absx+lanczos_g-0.5)-1)); } -- Steve 20170425 https://www.youtube.com/watch?v=VWUpyCsUKR4 20161221 https://www.youtube.com/watch?v=IbCHE-hONow From owner-freebsd-python@freebsd.org Sun Jun 18 21:00:36 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id D4BB2D8E053 for ; Sun, 18 Jun 2017 21:00:36 +0000 (UTC) (envelope-from bugzilla-noreply@FreeBSD.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id C27CC7C002 for ; Sun, 18 Jun 2017 21:00:36 +0000 (UTC) (envelope-from bugzilla-noreply@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id C1E8ED8E052; Sun, 18 Jun 2017 21:00:36 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id C19DDD8E051 for ; Sun, 18 Jun 2017 21:00:36 +0000 (UTC) (envelope-from bugzilla-noreply@FreeBSD.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id B7D777C001 for ; Sun, 18 Jun 2017 21:00:36 +0000 (UTC) (envelope-from bugzilla-noreply@FreeBSD.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5IL01HK025316 for ; Sun, 18 Jun 2017 21:00:36 GMT (envelope-from bugzilla-noreply@FreeBSD.org) Message-Id: <201706182100.v5IL01HK025316@kenobi.freebsd.org> From: bugzilla-noreply@FreeBSD.org To: python@FreeBSD.org Subject: Problem reports for python@FreeBSD.org that need special attention Date: Sun, 18 Jun 2017 21:00:36 +0000 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 18 Jun 2017 21:00:36 -0000 To view an individual PR, use: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=(Bug Id). The following is a listing of current problems submitted by FreeBSD users, which need special attention. These represent problem reports covering all versions including experimental development code and obsolete releases. Status | Bug Id | Description ------------+-----------+--------------------------------------------------- Open | 205308 | devel/py-pip and devel/py-virtualenv don't aggree Open | 211641 | graphics/py-mayavi mayavi2 runtime error Open | 219794 | devel/py-backports.functools_lru_cache: devel/py- Open | 219797 | databases/py-MySQLdb: Fails to build with MariaDB Open | 204982 | [NEW PORT] mail/py-alot: Terminal MUA using notmu Open | 219301 | devel/py-twisted152: Delete old port 6 problems total for which you should take action. From owner-freebsd-python@freebsd.org Mon Jun 19 08:46:50 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 52E5AD98844 for ; Mon, 19 Jun 2017 08:46:50 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 3DFA06A17D for ; Mon, 19 Jun 2017 08:46:50 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id 3D497D98843; Mon, 19 Jun 2017 08:46:50 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 3CF18D98842 for ; Mon, 19 Jun 2017 08:46:50 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org (portscout.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:6]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 2EC586A17C for ; Mon, 19 Jun 2017 08:46:50 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org ([127.0.1.123]) by portscout.ysv.freebsd.org (8.15.2/8.15.2) with ESMTP id v5J8kosD091737 for ; Mon, 19 Jun 2017 08:46:50 GMT (envelope-from portscout@FreeBSD.org) Received: (from portscout@localhost) by portscout.ysv.freebsd.org (8.15.2/8.15.2/Submit) id v5J8koew091736; Mon, 19 Jun 2017 08:46:50 GMT (envelope-from portscout@FreeBSD.org) Message-Id: <201706190846.v5J8koew091736@portscout.ysv.freebsd.org> X-Authentication-Warning: portscout.ysv.freebsd.org: portscout set sender to portscout@FreeBSD.org using -f Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain MIME-Version: 1.0 Date: Mon, 19 Jun 2017 08:46:50 +0000 From: portscout@FreeBSD.org To: python@freebsd.org Subject: FreeBSD ports you maintain which are out of date X-Mailer: portscout/0.8.1 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 Jun 2017 08:46:50 -0000 Dear port maintainer, The portscout new distfile checker has detected that one or more of your ports appears to be out of date. Please take the opportunity to check each of the ports listed below, and if possible and appropriate, submit/commit an update. If any ports have already been updated, you can safely ignore the entry. You will not be e-mailed again for any of the port/version combinations below. Full details can be found at the following URL: http://portscout.freebsd.org/python@freebsd.org.html Port | Current version | New version ------------------------------------------------+-----------------+------------ devel/py-simplejson | 3.10.0 | 3.11.0 ------------------------------------------------+-----------------+------------ devel/py3-simplejson | 3.10.0 | 3.11.0 ------------------------------------------------+-----------------+------------ If any of the above results are invalid, please check the following page for details on how to improve portscout's detection and selection of distfiles on a per-port basis: http://portscout.freebsd.org/info/portscout-portconfig.txt Thanks. From owner-freebsd-python@freebsd.org Mon Jun 19 16:49:22 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id EF20BDA0992 for ; Mon, 19 Jun 2017 16:49:22 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id D62A27BBF7 for ; Mon, 19 Jun 2017 16:49:22 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id D28BDDA0991; Mon, 19 Jun 2017 16:49:22 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id D20B6DA0990 for ; Mon, 19 Jun 2017 16:49:22 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id BF86E7BBF6 for ; Mon, 19 Jun 2017 16:49:22 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5JGnL83023335 for ; Mon, 19 Jun 2017 16:49:22 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 219641] devel/py-qt5-core: Fails to package/install, incorrect pk-plist entries Date: Mon, 19 Jun 2017 16:49:21 +0000 X-Bugzilla-Reason: CC X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: easy, patch-ready X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: mi@ALDAN.algebra.com X-Bugzilla-Status: Open X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: kde@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? exp-run? merge-quarterly? X-Bugzilla-Changed-Fields: keywords Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 Jun 2017 16:49:23 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D219641 Mikhail T. changed: What |Removed |Added ---------------------------------------------------------------------------- Keywords|needs-patch, needs-qa |easy, patch-ready --=20 You are receiving this mail because: You are on the CC list for the bug.= From owner-freebsd-python@freebsd.org Tue Jun 20 03:11:18 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 4BAB6D8C074 for ; Tue, 20 Jun 2017 03:11:18 +0000 (UTC) (envelope-from koobs.freebsd@gmail.com) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 22AD46F93D for ; Tue, 20 Jun 2017 03:11:18 +0000 (UTC) (envelope-from koobs.freebsd@gmail.com) Received: by mailman.ysv.freebsd.org (Postfix) id 21F39D8C072; Tue, 20 Jun 2017 03:11:18 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 1FEBCD8C071; Tue, 20 Jun 2017 03:11:18 +0000 (UTC) (envelope-from koobs.freebsd@gmail.com) Received: from mail-pg0-x241.google.com (mail-pg0-x241.google.com [IPv6:2607:f8b0:400e:c05::241]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (Client CN "smtp.gmail.com", Issuer "Google Internet Authority G2" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id DE3556F93B; Tue, 20 Jun 2017 03:11:17 +0000 (UTC) (envelope-from koobs.freebsd@gmail.com) Received: by mail-pg0-x241.google.com with SMTP id e187so10387165pgc.3; Mon, 19 Jun 2017 20:11:17 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=sender:reply-to:subject:to:references:from:message-id:date :user-agent:mime-version:in-reply-to:content-language :content-transfer-encoding; bh=ecHvhPYfkOHdsmRk6EKg8kDhNcSPBCn/28XADSUgF90=; b=Gj1rBVepdvExyyuZKHxX19YJ8SKANyeOcqriMG2xQYIhGcKn0liMkQYGnpBrBKPJx1 lJ0LrAS7VxPJbailk/rqYUTuMj70JdElwlFxus/P5Q4S8qz4gzaUIVpq+6X3JdHNBEt2 ZhnlCl1/pqWFdT5DKLR0IZPMleaIug2lwXEMz+xVGaAUtCUG5S8K+D48z+HZXME8/tNV burAnabCilpeGdVKFYZqgpSxUCoB1azGwG9CgGt0vyqIvNaIOPXWBwbO1qpU6NTgNSeP GNzfM0d9Qa9H98+k3dTy1m58KHpfP8JegWy4gpW4ZOXQ7sHNqS5xcEzUp0jYXjuSpFl1 ykFg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:sender:reply-to:subject:to:references:from :message-id:date:user-agent:mime-version:in-reply-to :content-language:content-transfer-encoding; bh=ecHvhPYfkOHdsmRk6EKg8kDhNcSPBCn/28XADSUgF90=; b=nF37knLYvPALxqq2ImPPNW+Ppmf31T11f4mV+DD3CqEs9WhMS5ncn9qgRn8zOuSd4m BQgs1PzRiGXfKP6KdZLRypAWCkGgQcyprhlZzghTc+gKl08Zg5BpVPcHBRT8Z0xU3/vg X7/sn63wTQky/gM9cYdqfVcObnC7DpbOrOdvJpqWP4pR2TXVzWDOyDqJV5pgrkdWKWal I2xwCdjp7p4PCGjGJ4SY468wjmVJdWc/a1mefDKzlLeG7dspYS5tyXg7TF8eLrOD9TNR ZNZtv61vJfYdmLsplfk+Hnu0qYrnh7bDp6HSnEjSB7XpXiawtByTRzKwVulljkV2C1VB 14eA== X-Gm-Message-State: AKS2vOyHwwgqHGM18yT+wv1TzWurun22sh2BpNXS2AzIWEUd0ZV//uMa 2eQhJw3N+VA39OYHcAw= X-Received: by 10.99.147.91 with SMTP id w27mr27740359pgm.24.1497928277189; Mon, 19 Jun 2017 20:11:17 -0700 (PDT) Received: from ?IPv6:2001:44b8:31ae:7b01:2042:3e8:d7ce:9b9c? 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[2001:44b8:31ae:7b01:2042:3e8:d7ce:9b9c]) by smtp.gmail.com with ESMTPSA id v6sm11808081pfl.2.2017.06.19.20.11.15 (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Mon, 19 Jun 2017 20:11:16 -0700 (PDT) Sender: Kubilay Kocak Reply-To: koobs@FreeBSD.org Subject: Re: [PATCH] lang/python27 -- Fix namespace collision To: sgk@troutmask.apl.washington.edu, freebsd-ports@freebsd.org, python@FreeBSD.org References: <20170618182905.GA67867@troutmask.apl.washington.edu> <20170618183112.GA67920@troutmask.apl.washington.edu> From: Kubilay Kocak Message-ID: <9090f327-3266-35b3-8bf3-f83b7c741fe2@FreeBSD.org> Date: Tue, 20 Jun 2017 13:06:28 +1000 User-Agent: Mozilla/5.0 (Windows NT 10.0; WOW64; rv:54.0) Gecko/20100101 Thunderbird/54.0a2 MIME-Version: 1.0 In-Reply-To: <20170618183112.GA67920@troutmask.apl.washington.edu> Content-Type: text/plain; charset=utf-8 Content-Language: en-AU Content-Transfer-Encoding: 7bit X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 Jun 2017 03:11:18 -0000 On 6/19/17 4:31 AM, Steve Kargl wrote: > On Sun, Jun 18, 2017 at 11:29:05AM -0700, Steve Kargl wrote: >> Both IEEE-754 2008 and ISO/IEC TS 18661-4 define the half-cycle >> trignometric functions cospi, sinpi, and tanpi. When libm (aka >> math.h) grows support for sinpi(x), lang/python27 has a namespace >> collision. The attached patch fixes the problem. >> Hi Steve, Is this issue relevant only for particular (and/or future) FreeBSD versions ('where libm grows supports for x, y') or independent of base entirely? Also, could you open an upstream issue regarding this please, as a long-term target for all local (Python port) patches is that they are included upstream. This also ensures we can document all patches with their relevant upstream issue/commit references for our future selves and others. ./koobs > Well, that's inconvenient. Seems attachments are stripped. > > --- Modules/mathmodule.c.orig 2017-06-18 11:09:05.938222000 -0700 > +++ Modules/mathmodule.c 2017-06-18 11:09:56.248307000 -0700 > @@ -71,7 +71,7 @@ > static const double sqrtpi = 1.772453850905516027298167483341145182798; > > static double > -sinpi(double x) > +my_sinpi(double x) > { > double y, r; > int n; > @@ -270,7 +270,7 @@ > integer. */ > if (absx > 200.0) { > if (x < 0.0) { > - return 0.0/sinpi(x); > + return 0.0/my_sinpi(x); > } > else { > errno = ERANGE; > @@ -294,7 +294,7 @@ > } > z = z * lanczos_g / y; > if (x < 0.0) { > - r = -pi / sinpi(absx) / absx * exp(y) / lanczos_sum(absx); > + r = -pi / my_sinpi(absx) / absx * exp(y) / lanczos_sum(absx); > r -= z * r; > if (absx < 140.0) { > r /= pow(y, absx - 0.5); > @@ -366,7 +366,7 @@ > (x-0.5)*(log(x+lanczos_g-0.5)-1); > } > else { > - r = log(pi) - log(fabs(sinpi(absx))) - log(absx) - > + r = log(pi) - log(fabs(my_sinpi(absx))) - log(absx) - > (log(lanczos_sum(absx)) - lanczos_g + > (absx-0.5)*(log(absx+lanczos_g-0.5)-1)); > } > From owner-freebsd-python@freebsd.org Tue Jun 20 03:49:34 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id BC97ED8D804 for ; Tue, 20 Jun 2017 03:49:34 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id A317D719CC for ; Tue, 20 Jun 2017 03:49:34 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: by mailman.ysv.freebsd.org (Postfix) id 9F907D8D801; Tue, 20 Jun 2017 03:49:34 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 9EE9AD8D800; Tue, 20 Jun 2017 03:49:34 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (troutmask.apl.washington.edu [128.95.76.21]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "troutmask", Issuer "troutmask" (not verified)) by mx1.freebsd.org (Postfix) with ESMTPS id 814C6719CB; Tue, 20 Jun 2017 03:49:34 +0000 (UTC) (envelope-from sgk@troutmask.apl.washington.edu) Received: from troutmask.apl.washington.edu (localhost [127.0.0.1]) by troutmask.apl.washington.edu (8.15.2/8.15.2) with ESMTPS id v5K3nR15075582 (version=TLSv1.2 cipher=DHE-RSA-AES256-GCM-SHA384 bits=256 verify=NO); Mon, 19 Jun 2017 20:49:27 -0700 (PDT) (envelope-from sgk@troutmask.apl.washington.edu) Received: (from sgk@localhost) by troutmask.apl.washington.edu (8.15.2/8.15.2/Submit) id v5K3nRL9075581; Mon, 19 Jun 2017 20:49:27 -0700 (PDT) (envelope-from sgk) Date: Mon, 19 Jun 2017 20:49:27 -0700 From: Steve Kargl To: Kubilay Kocak Cc: freebsd-ports@freebsd.org, python@FreeBSD.org Subject: Re: [PATCH] lang/python27 -- Fix namespace collision Message-ID: <20170620034927.GA75540@troutmask.apl.washington.edu> Reply-To: sgk@troutmask.apl.washington.edu References: <20170618182905.GA67867@troutmask.apl.washington.edu> <20170618183112.GA67920@troutmask.apl.washington.edu> <9090f327-3266-35b3-8bf3-f83b7c741fe2@FreeBSD.org> MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline In-Reply-To: <9090f327-3266-35b3-8bf3-f83b7c741fe2@FreeBSD.org> User-Agent: Mutt/1.7.2 (2016-11-26) X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 Jun 2017 03:49:34 -0000 On Tue, Jun 20, 2017 at 01:06:28PM +1000, Kubilay Kocak wrote: > On 6/19/17 4:31 AM, Steve Kargl wrote: > > On Sun, Jun 18, 2017 at 11:29:05AM -0700, Steve Kargl wrote: > >> Both IEEE-754 2008 and ISO/IEC TS 18661-4 define the half-cycle > >> trignometric functions cospi, sinpi, and tanpi. When libm (aka > >> math.h) grows support for sinpi(x), lang/python27 has a namespace > >> collision. The attached patch fixes the problem. > >> > > Is this issue relevant only for particular (and/or future) FreeBSD > versions ('where libm grows supports for x, y') or independent of base > entirely? It will be an issue with a future BSD. It seems to take a long time before any of my libm improvements are committed. At the moment, bde and I are probably the only people with sinpi(x) in our libm. I do, however, anticipate that glibc will get these functions in the future as portions of ISO/IEC TS 18661-4 have already been implemented. > Also, could you open an upstream issue regarding this please, as a > long-term target for all local (Python port) patches is that they are > included upstream. In the 5 minutes that I've searched, I've found https://bugs.python.org/ but there are no instructions on how to submit a bug report. -- Steve 20170425 https://www.youtube.com/watch?v=VWUpyCsUKR4 20161221 https://www.youtube.com/watch?v=IbCHE-hONow From owner-freebsd-python@freebsd.org Fri Jun 23 00:22:52 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id E18BAD9828D for ; Fri, 23 Jun 2017 00:22:52 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id C862970BE3 for ; Fri, 23 Jun 2017 00:22:52 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id C7997D9828C; Fri, 23 Jun 2017 00:22:52 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id C73D4D9828B for ; Fri, 23 Jun 2017 00:22:52 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id B49AB70BE2 for ; Fri, 23 Jun 2017 00:22:52 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5N0MpGk033765 for ; Fri, 23 Jun 2017 00:22:52 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 218729] [NEW PORT] biology/py-pymol: OpenGL based molecular visualization system Date: Fri, 23 Jun 2017 00:22:52 +0000 X-Bugzilla-Reason: CC X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: feature, needs-patch, needs-qa X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: koobs@FreeBSD.org X-Bugzilla-Status: Open X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_status cc keywords short_desc flagtypes.name Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 23 Jun 2017 00:22:53 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D218729 Kubilay Kocak changed: What |Removed |Added ---------------------------------------------------------------------------- Status|New |Open CC| |python@FreeBSD.org, | |yuri@rawbw.com Keywords| |feature, needs-patch, | |needs-qa Summary|[NEW PORT] |[NEW PORT] |science/py-pymol: OpenGL |biology/py-pymol: OpenGL |based molecular |based molecular |visualization system |visualization system Flags| |maintainer-feedback?(yuri@r | |awbw.com) --- Comment #6 from Kubilay Kocak --- Thank you Yuri. Could you please: - Lowercase PORTNAME (See: https://wiki.freebsd.org/Python/PortsPolicy) - Update primary category to biology (retaining science as the secondary) - Add a comment about autoplist just above the USE_PYTHON line pointing to = the upstream issue/pr On the question of whether this is a revive or a new port: Since this ports svn directory is (correctly) prefixed/named py-pymol, remo= val of the existing biology/pymol entry is not necessary (and it is 'new') If on the other hand it is named/renamed biology/pymol (no svn dir prefix, = but still using ${PYTHON_PKGNAMEPREFIX), the MOVED entry should be removed. (an= d it is a revive) --=20 You are receiving this mail because: You are on the CC list for the bug.= From owner-freebsd-python@freebsd.org Fri Jun 23 01:39:08 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 98FB5D995C3 for ; Fri, 23 Jun 2017 01:39:08 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 8083072B25 for ; Fri, 23 Jun 2017 01:39:08 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id 7D2BFD995C2; Fri, 23 Jun 2017 01:39:08 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 7B019D995C1 for ; Fri, 23 Jun 2017 01:39:08 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 5E57172B23 for ; Fri, 23 Jun 2017 01:39:08 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5N1d8Sv025918 for ; Fri, 23 Jun 2017 01:39:08 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 218729] [NEW PORT] biology/py-pymol: OpenGL based molecular visualization system Date: Fri, 23 Jun 2017 01:39:08 +0000 X-Bugzilla-Reason: CC X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: feature, needs-patch, needs-qa X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: yuri@rawbw.com X-Bugzilla-Status: Open X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: attachments.isobsolete attachments.created Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 23 Jun 2017 01:39:08 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D218729 Yuri Victorovich changed: What |Removed |Added ---------------------------------------------------------------------------- Attachment #183679|0 |1 is obsolete| | --- Comment #7 from Yuri Victorovich --- Created attachment 183728 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D183728&action= =3Dedit shar archive Hi Kubilay, This port is about chemistry, not biology. It can work with any molecules, = not only those that appear in living beings. But since we don't have the 'chemistry' category, I think 'science' is the right category for it to be under. I updated the other items. Regards, Yuri --=20 You are receiving this mail because: You are on the CC list for the bug.= From owner-freebsd-python@freebsd.org Fri Jun 23 02:14:35 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id BDE1BD9A0D8 for ; Fri, 23 Jun 2017 02:14:35 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id A4DA273B82 for ; Fri, 23 Jun 2017 02:14:35 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id A13DDD9A0D6; Fri, 23 Jun 2017 02:14:35 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id A0DECD9A0D5 for ; Fri, 23 Jun 2017 02:14:35 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 8E1BE73B81 for ; Fri, 23 Jun 2017 02:14:35 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5N2EZGo099410 for ; Fri, 23 Jun 2017 02:14:35 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 218729] [NEW PORT] biology/py-pymol: OpenGL based molecular visualization system Date: Fri, 23 Jun 2017 02:14:35 +0000 X-Bugzilla-Reason: CC X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: feature X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: koobs@FreeBSD.org X-Bugzilla-Status: Open X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback+ X-Bugzilla-Changed-Fields: keywords flagtypes.name Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 23 Jun 2017 02:14:35 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D218729 Kubilay Kocak changed: What |Removed |Added ---------------------------------------------------------------------------- Keywords|needs-patch, needs-qa | Flags|maintainer-feedback?(yuri@r |maintainer-feedback+ |awbw.com) | --- Comment #8 from Kubilay Kocak --- Thank you for the explanation Yuri --=20 You are receiving this mail because: You are on the CC list for the bug.= From owner-freebsd-python@freebsd.org Fri Jun 23 04:46:15 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 2BD17D9C4AE for ; Fri, 23 Jun 2017 04:46:15 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 130BC77980 for ; Fri, 23 Jun 2017 04:46:15 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id 0F764D9C4AB; Fri, 23 Jun 2017 04:46:15 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 0D7FAD9C4AA for ; Fri, 23 Jun 2017 04:46:15 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id EFBB87797F for ; Fri, 23 Jun 2017 04:46:14 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5N4kEir002321 for ; Fri, 23 Jun 2017 04:46:14 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 218729] [NEW PORT] science/py-pymol: OpenGL based molecular visualization system Date: Fri, 23 Jun 2017 04:46:14 +0000 X-Bugzilla-Reason: CC X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: feature X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: yuri@rawbw.com X-Bugzilla-Status: Open X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback+ X-Bugzilla-Changed-Fields: short_desc Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 23 Jun 2017 04:46:15 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D218729 Yuri Victorovich changed: What |Removed |Added ---------------------------------------------------------------------------- Summary|[NEW PORT] |[NEW PORT] |biology/py-pymol: OpenGL |science/py-pymol: OpenGL |based molecular |based molecular |visualization system |visualization system --=20 You are receiving this mail because: You are on the CC list for the bug.= From owner-freebsd-python@freebsd.org Fri Jun 23 10:48:46 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id CD831DA1CCD for ; Fri, 23 Jun 2017 10:48:46 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id B8A1180EE2 for ; Fri, 23 Jun 2017 10:48:46 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id B7CF0DA1CCB; Fri, 23 Jun 2017 10:48:46 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id B5C47DA1CCA for ; Fri, 23 Jun 2017 10:48:46 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org (portscout.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:6]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id A787680EE1 for ; Fri, 23 Jun 2017 10:48:46 +0000 (UTC) (envelope-from portscout@FreeBSD.org) Received: from portscout.ysv.freebsd.org ([127.0.1.123]) by portscout.ysv.freebsd.org (8.15.2/8.15.2) with ESMTP id v5NAmkU9027371 for ; Fri, 23 Jun 2017 10:48:46 GMT (envelope-from portscout@FreeBSD.org) Received: (from portscout@localhost) by portscout.ysv.freebsd.org (8.15.2/8.15.2/Submit) id v5NAmknt027370; Fri, 23 Jun 2017 10:48:46 GMT (envelope-from portscout@FreeBSD.org) Message-Id: <201706231048.v5NAmknt027370@portscout.ysv.freebsd.org> X-Authentication-Warning: portscout.ysv.freebsd.org: portscout set sender to portscout@FreeBSD.org using -f Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain MIME-Version: 1.0 Date: Fri, 23 Jun 2017 10:48:46 +0000 From: portscout@FreeBSD.org To: python@freebsd.org Subject: FreeBSD ports you maintain which are out of date X-Mailer: portscout/0.8.1 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 23 Jun 2017 10:48:46 -0000 Dear port maintainer, The portscout new distfile checker has detected that one or more of your ports appears to be out of date. Please take the opportunity to check each of the ports listed below, and if possible and appropriate, submit/commit an update. If any ports have already been updated, you can safely ignore the entry. You will not be e-mailed again for any of the port/version combinations below. Full details can be found at the following URL: http://portscout.freebsd.org/python@freebsd.org.html Port | Current version | New version ------------------------------------------------+-----------------+------------ devel/py-jupyter_client | 5.0.1 | 5.1.0 ------------------------------------------------+-----------------+------------ If any of the above results are invalid, please check the following page for details on how to improve portscout's detection and selection of distfiles on a per-port basis: http://portscout.freebsd.org/info/portscout-portconfig.txt Thanks. From owner-freebsd-python@freebsd.org Sat Jun 24 14:25:36 2017 Return-Path: Delivered-To: freebsd-python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 396DCD9F91B for ; Sat, 24 Jun 2017 14:25:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 212506E2B4 for ; Sat, 24 Jun 2017 14:25:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id 206DAD9F91A; Sat, 24 Jun 2017 14:25:36 +0000 (UTC) Delivered-To: python@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 2013DD9F919 for ; Sat, 24 Jun 2017 14:25:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 0E0D86E2B2 for ; Sat, 24 Jun 2017 14:25:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id v5OEPZc5087434 for ; Sat, 24 Jun 2017 14:25:35 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: python@FreeBSD.org Subject: [Bug 216953] devel/py-setuptools: egg_info fails under python 3.4.6 on nonexistent MANIFEST graft Date: Sat, 24 Jun 2017 14:25:36 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: john@saltant.com X-Bugzilla-Status: Closed X-Bugzilla-Resolution: Overcome By Events X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: python@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: resolution bug_status Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 24 Jun 2017 14:25:36 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D216953 John W. O'Brien changed: What |Removed |Added ---------------------------------------------------------------------------- Resolution|--- |Overcome By Events Status|New |Closed --- Comment #8 from John W. O'Brien --- Resolved by upgrade to setuptools 36.0.1 (bug #219876) --=20 You are receiving this mail because: You are the assignee for the bug.=