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[89.241.98.164]) by smtp.gmail.com with ESMTPSA id 5b1f17b1804b1-452730b92c9sm112440175e9.24.2025.06.09.09.44.21 (version=TLS1_3 cipher=TLS_AES_128_GCM_SHA256 bits=128/128); Mon, 09 Jun 2025 09:44:21 -0700 (PDT) Message-ID: Date: Mon, 9 Jun 2025 17:44:20 +0100 List-Id: Packaging the FreeBSD base system List-Archive: https://lists.freebsd.org/archives/freebsd-pkgbase List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkgbase@FreeBSD.org MIME-Version: 1.0 User-Agent: Mozilla Thunderbird Subject: Re: base packages orphaned From: Graham Perrin To: freebsd-pkgbase@freebsd.org References: <68d55778-4c66-440d-9213-dbe888ee1cf5@gmail.com> <9fdf2770-fb65-4449-b7fe-991c23ae0091@gmail.com> Content-Language: en-GB Cc: freebsd-pkg@freebsd.org Autocrypt: addr=grahamperrin@gmail.com; keydata= xsFNBGKYt7ABEAClu83dJ3ZKfVgPOk9YKRv0Z+dl2b88+k9R4vwAmElgguYdKE7yhnQNhhWM v9vi6AFrBMc2oJdVHJ2OrXfwpELBFIgiSMEWNsC4e+Z3HtSajcl+pFZsP7ciiSoycj/w3wIV kAZoVGbhyIbNG7fbCEJ8q81TbfsGypV3bRmbZVvGNecBguYiooBtz2Qht1p3itXMkIA6P9pS YDl+6QddZLyUUAjAnFv2QDoYSHLnaDUWw4oONZsB0SKVu8jMIBh4uJZoYEOvdvc9jQQdOpA2 CAgA6ulfm42Ikr9lKBUUCtjqiWAhJ7iXOTyHAIdR4Mf8alCE6tdTq6dHdIt+GktTY7oYNyL2 3aD3C7I5waU0SFXvJcOMG10QLfwYQMOQoYQ9XJ0U5A28WYiDcylDdUWT7SappP1e1ZMeJWWO y14mxxNzHaJSI4rK8P/p5tp3Q7SSC4k5gMh9zKba3K2ApCWNbVLGvXsJeQkZZNvu70tE81ey AHI5iZcB6D7WaHysBUmsKaEpbcmm1ZThTnGL0SHEl5to5Jab5Fg6O+Cnly5sVz5lX/v8Aosx kKNei7SCVqXOVtteQeGxWbXWbhPgbMyc0Gi3DuxBI/yvJ43k/rJysQlLGLWfJx/UXprwLluC PDK9EvKEB+fD1Z349uzp1sKr3ihpySbyKI8fpudftnAz4EsoCwARAQABzSZHcmFoYW0gUGVy cmluIDxncmFoYW1wZXJyaW5AZ21haWwuY29tPsLBlAQTAQoAPhYhBFk/5bLDBwftvJcvCrdn SG9KGNQLBQJoRALAAhsDBQkPEg5ABQsJCAcDBRUKCQgLBRYDAgEAAh4FAheAAAoJELdnSG9K GNQL8YkP/2V1z6XQDyG1QlKAu8TuE8zDWy9QQKjC/G44hlu5zk+2kWSNk4zeExs9ZXOBmVhF EW1d+1J8wDiYIeKYj/rqMoP+gb8o0Au0lSRitvTdLxkZBFGMn0CEzlDOzv+wmiy0ggAV/s+Y EbiHk12fI0LoTy5/ywdmG/uGS7M6p3XOrM0YO1qmLXy1cUyYDsYIpq5/rT0QzpGowsJLoEA3 zz1vfKVY+RTorsL4W8ljXLmcs4c3b3HZG9Xmgtt+Ni/eb9CjzM7kCXOcSMnVzvfscCowPAwB 0ZHlNxNV0MTa61xgvOCk4Zf278ArRgbTm4oOz9Z4ciPMnVue+9P/VdxIxgUuYkAryM0+agGz L9bd8ljn+efNtgZ5dlDLrNnTE+vWnMVlMXgl7BNnhwHg7UYFLrC2xklsICub0qpnNheTGeqo 0N4UongJTQJ6H6LEpgd+KMkCncAHghED/G0/BUdO90VEOoqnIKwKa+F9NqVMvHWc8D58mwCP FghsmxK9FM9pnsjLmG7u+s51Y7++GSRnU4NkI4tHiVk7hcAcvZuc0QbUDwVMTurDUgIqRo6W 80j1tFjEspkrwtMoeVFEkDHktjoc3AoEymXIncZfqIqi3nVseyDVyNByvkV0mutX9hXqac0/ RXMuyK9KniAUZ9+gsWs4rPs/DOdsw4K8/RnjduBrfCYQzsFNBGKYt7ABEADRb1tZuh7DPYET 0wK6fe7owbYgM+RfKhmcrGgR2HI9M2q6+0WKF/ITnggWdIW2Ecc4z2boLz/cwvPGCS7/YxZM 61KklGCwuS7q1s04XnHDWHuFxfXQPzAdVmNO3bYoMZbJjHXs6sB2u5ksiwPwaMAWWaGkviSj c5pwvHCiTmX5vH5CBj/Vi+5ESyX38vK4JM5S/m4ouI/6M9biyFgimV+v3vVyCxJCT1gI9g4o GIh1qq5S433b1fihn4yHPf8XOKyBpA/QcwLONViBqJL5nnOxpsh344rNxn2R7CcRzzicOV+e 2IbMem4lwNWQlZKoRotKXZi9LqN5mynSBYqAUdoZum0QinWT9F22B0Qex5PH1zAt9i2W91Vd kcPB3LwkRXj07ycRtsSzpgPA6fLc6AsoWFslHl8kVOO5eJIA4xhjlPa+W8lguQHZ0iX+5uAv 2eAgXR2swADuHPuENNFStmsgAMl8OOOgtq75yA5TpyIzxMuXV9Nmp0VfIaUM/IdLdmxhc1pC c320l5fYMHVLFAReWEbSj2QH8YzWfpXHIegutWWYEbH9SiDXgS9KoKmCJV/Qa+x6/b8y3pOZ vnIbCDaynC2Yr50s8gRa9kb54JE8Z+p8r16U3SEsK3PtUi0RF0e51danCVHrrE6/Hat2XUO/ 6nnYgVgFOrLao6Gh/VMs8wARAQABwsF8BBgBCgAmFiEEWT/lssMHB+28ly8Kt2dIb0oY1AsF AmhEAsACGwwFCQ8SDkAACgkQt2dIb0oY1AvQxw//REWYFK2m4yS/QP5kzfhkWcNqDI/akGT5 /LXmdmbc1s78+mOMXnA4vBY/+X1QatgxWUECkPDOiIwXJMxoBuyY8e7spLRXeyhtfh5aYaJc MO5bARX0c49v+KfZ80u9tG2rkKQvAt/ySo7OXsbDADFFRhlc8RLbb8e7bSctGbYZk9CYa0ya dW5+n3znDNJ6yW1skx9wTH+Y8VlSazRLk3XgXscNqBA2h56v3WS/R5dI++7AQxZxSQacQvfj 9eahq7ATdB4zMQ9MBHEwOvGD3DLlc55FYSDZvNX+mhnK7S0t1Nt2EtGUOmXb5ysMFGnbsce0 woKQ0sLPF1HWDAAf7tBCF8mpPIzU/ViAkupsJ6NYCD0tLFD8pvl0NYU2TjvyWh6ie3e5B/b3 8Daiyme+M92ivfoRQOFKmkPfeT14AI6OW1k7qFbmoIwMWWQdFWAl1CP9hNdF9gRN4rFB0Jy1 90BajZW2zOdVfqdurJZegCzAowZalLm4JEK2MklpPzipibnJqhLOmvJy587pF52KDdM/4rLy BBREIm7uRivnO5k/BY5qS+H/aqv97LC0PVaTsLXbDmTxTnJplUpdlYT9NGidM+x/ioS0iztO Cht7cT8V8jvvKZYvNpst8iqxuIaoV9V7aZ0wAQpkgDGXHmSzwtz6U8xNf/4e4sLn9KPlldSd kvo= In-Reply-To: <9fdf2770-fb65-4449-b7fe-991c23ae0091@gmail.com> Content-Type: text/plain; charset=UTF-8; format=flowed Content-Transfer-Encoding: 8bit X-Spamd-Result: default: False [-0.29 / 15.00]; NEURAL_SPAM_MEDIUM(0.98)[0.982]; NEURAL_HAM_SHORT(-0.93)[-0.931]; NEURAL_SPAM_LONG(0.66)[0.664]; DMARC_POLICY_ALLOW(-0.50)[gmail.com,none]; R_SPF_ALLOW(-0.20)[+ip6:2a00:1450:4000::/36:c]; R_DKIM_ALLOW(-0.20)[gmail.com:s=20230601]; MIME_GOOD(-0.10)[text/plain]; TO_MATCH_ENVRCPT_ALL(0.00)[]; RCVD_TLS_LAST(0.00)[]; DWL_DNSWL_NONE(0.00)[gmail.com:dkim]; RCPT_COUNT_TWO(0.00)[2]; ARC_NA(0.00)[]; FREEMAIL_ENVFROM(0.00)[gmail.com]; MIME_TRACE(0.00)[0:+]; FREEMAIL_FROM(0.00)[gmail.com]; DKIM_TRACE(0.00)[gmail.com:+]; FREEFALL_USER(0.00)[grahamperrin]; TO_DN_NONE(0.00)[]; RCVD_COUNT_TWO(0.00)[2]; FROM_EQ_ENVFROM(0.00)[]; RCVD_IN_DNSWL_NONE(0.00)[2a00:1450:4864:20::42d:from]; MLMMJ_DEST(0.00)[freebsd-pkgbase@freebsd.org,freebsd-pkg@freebsd.org]; RCVD_VIA_SMTP_AUTH(0.00)[]; MID_RHS_MATCH_FROM(0.00)[]; ASN(0.00)[asn:15169, ipnet:2a00:1450::/32, country:US]; FROM_HAS_DN(0.00)[] X-Rspamd-Queue-Id: 4bGHnj2b2Pz3Zbl X-Spamd-Bar: / Re: Again, I found:     518 base packages orphaned     db-pkgtemp at /var/db/pkg/repos/FreeBSD-base/ Worked around in the same way as before, database files copied from the previous boot environment. ---- root@mowa219-gjp4-zbook-freebsd:~ # bectl list -c creation | tail -n 6 1500044-002-base         -      -          1.06G 2025-05-29 23:39 1500044-003-base         -      -          5.09M 2025-06-01 15:28 1500044-004-base         -      -          1.22G 2025-06-02 19:28 1500045-001-base         -      -          786M  2025-06-05 19:51 1500045-002-base-ports   -      -          813M  2025-06-06 07:00 1500045-003-base         NR     /          191G  2025-06-06 18:05 root@mowa219-gjp4-zbook-freebsd:~ # pkg version -C -vRL= | grep -v orphaned Updating FreeBSD-ports repository catalogue... FreeBSD-ports repository is up to date. Updating FreeBSD-base repository catalogue... FreeBSD-base repository is up to date. Updating FreeBSD-kmods repository catalogue... FreeBSD-kmods repository is up to date. Updating local-current repository catalogue... local-current repository is up to date. All repositories are up to date. curl-8.14.0                        >   succeeds remote (remote has 8.13.0_2) freebsd-release-manifests-20250523 >   succeeds remote (remote has 20250516) libxslt-1.1.42                     <   needs updating (remote has 1.1.43) pkg-2.1.4                          >   succeeds remote (remote has 2.1.2) python311-3.11.12_1                >   succeeds remote (remote has 3.11.12) talloc-2.4.2                       >   succeeds remote (remote has 2.4.1_1) tevent-0.16.1                      >   succeeds remote (remote has 0.15.0_1) virtualbox-ose-70-7.0.26           <   needs updating (remote has 7.0.26_2) virtualbox-ose-kmod-70-7.0.26.1500044 >   succeeds remote (remote has 7.0.26.1500043) root@mowa219-gjp4-zbook-freebsd:~ # pkg orphans | grep orphaned\:\ base | wc -l      518 root@mowa219-gjp4-zbook-freebsd:~ # bectl mount 1500045-002-base-ports /tmp/down /tmp/down root@mowa219-gjp4-zbook-freebsd:~ # cp -av /tmp/down/var/db/pkg/repos/FreeBSD-base/* /var/db/pkg/repos/FreeBSD-base /tmp/down/var/db/pkg/repos/FreeBSD-base/db -> /var/db/pkg/repos/FreeBSD-base/db /tmp/down/var/db/pkg/repos/FreeBSD-base/db-journal -> /var/db/pkg/repos/FreeBSD-base/db-journal /tmp/down/var/db/pkg/repos/FreeBSD-base/expired_packages.ucl -> /var/db/pkg/repos/FreeBSD-base/expired_packages.ucl /tmp/down/var/db/pkg/repos/FreeBSD-base/groups.ucl -> /var/db/pkg/repos/FreeBSD-base/groups.ucl /tmp/down/var/db/pkg/repos/FreeBSD-base/lock -> /var/db/pkg/repos/FreeBSD-base/lock /tmp/down/var/db/pkg/repos/FreeBSD-base/meta -> /var/db/pkg/repos/FreeBSD-base/meta root@mowa219-gjp4-zbook-freebsd:~ # ls -hln /var/db/pkg/repos/FreeBSD-base total 544 KB -rw-r--r--  1 0 0  772K Jun  6 12:32 db -rw-r--r--  1 0 0    0B Jun  6 18:02 db-journal -rw-r--r--  1 0 0  772K Jun  6 23:53 db-pkgtemp -rw-r--r--  1 0 0    2B Feb 12 00:30 expired_packages.ucl -rw-r--r--  1 0 0    2B Feb 12 00:30 groups.ucl -rw-r--r--  1 0 0    0B Jun  6 18:02 lock -rw-r--r--  1 0 0  173B Jun  6 12:32 meta root@mowa219-gjp4-zbook-freebsd:~ # rm /var/db/pkg/repos/FreeBSD-base/db-pkgtemp root@mowa219-gjp4-zbook-freebsd:~ # ls -hln /tmp/down/var/db/pkg/repos/FreeBSD-base total 275 KB -rw-r--r--  1 0 0  772K Jun  6 12:32 db -rw-r--r--  1 0 0    0B Jun  6 18:02 db-journal -rw-r--r--  1 0 0    2B Feb 12 00:30 expired_packages.ucl -rw-r--r--  1 0 0    2B Feb 12 00:30 groups.ucl -rw-r--r--  1 0 0    0B Jun  6 18:02 lock -rw-r--r--  1 0 0  173B Jun  6 12:32 meta root@mowa219-gjp4-zbook-freebsd:~ # pkg orphans | grep orphaned\:\ base | wc -l load: 1.70  cmd: pkg 16235 [ttyin] 1426.33r 0.01u 0.02s 0% 16316k ^Cpkg: signal received, cleaning up root@mowa219-gjp4-zbook-freebsd:~ # bectl umount 1500045-002-base-ports root@mowa219-gjp4-zbook-freebsd:~ # pkg update -f Updating FreeBSD-ports repository catalogue... Fetching meta.conf: 100%    179 B   0.2kB/s    00:01 Fetching data.pkg: 100%   10 MiB   1.8MB/s    00:06 Processing entries: 100% The provides database is up-to-date. FreeBSD-ports repository update completed. 35878 packages processed. Updating FreeBSD-base repository catalogue... Fetching meta.conf: 100%    179 B   0.2kB/s    00:01 Fetching data.pkg: 100%   53 KiB  54.4kB/s    00:01 Processing entries:   0% Newer FreeBSD version for package FreeBSD-zfs-lib32: To ignore this error set IGNORE_OSVERSION=yes - package: 1500046 - running userland: 1500045 Ignore the mismatch and continue? [y/N]: y Processing entries: 100% The provides database is up-to-date. FreeBSD-base repository update completed. 554 packages processed. Updating FreeBSD-kmods repository catalogue... Fetching meta.conf: 100%    179 B   0.2kB/s    00:01 Fetching data.pkg: 100%   14 KiB  14.1kB/s    00:01 Processing entries: 100% The provides database is up-to-date. FreeBSD-kmods repository update completed. 43 packages processed. Updating local-current repository catalogue... Fetching meta.conf: 100%    179 B   0.2kB/s    00:01 Fetching data.pkg: 100%   96 KiB  98.0kB/s    00:01 Processing entries: 100% The provides database is up-to-date. local-current repository update completed. 288 packages processed. All repositories are up to date. root@mowa219-gjp4-zbook-freebsd:~ # /usr/bin/time -h pkg orphans | grep orphaned\:\ base | wc -l         39.38s real             38.57s user             0.12s sys        0 root@mowa219-gjp4-zbook-freebsd:~ #