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Date:      Fri, 14 Apr 2006 18:36:15 +0200
From:      Terje With Lunndal <terje@lunndal.priv.no>
To:        freebsd-database@freebsd.org
Subject:   Sporadic MySQL InnoDB page corruption after reboot in FreeBSD 6.1-RC
Message-ID:  <443FCF7F.8090604@lunndal.priv.no>

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Greetings,

I hesitated to post to this FreeBSD specific list, but after recreating 
the same error on the same server with a fresh installation of both 
MySQL 4 and 5, I decided to give this list a try.

I have a relatively new FreeBSD 6.1-RC installation on which I run a 
MySQL 4.1.18_2 server. With a clean database, as installed from the 
port, the MySQL server refuses to start up after a regular reboot due to 
a "database page corruption on disk or a failed file read". The MySQL 
log file speculates that a reboot might help. If I then reboot the 
system, the database seems to start up just fine most of the time.

Simply restarting the MySQL daemon does not seem to recreate the error, 
nor does it seem to help after the error already has ocurred.
Rebooting the system seems to create the problem, but in some cases it 
seems to fix it. There are no errors in /var/log/messages.

Does anybody have any pointers as to where I sould be looking for a 
solution? Maybe someone out there has any good idea as to what is 
causing this?

I am providing some information about the system, the MySQL error log 
and the dmesg output. Please let me know if I can provide any other 
informations.


System setup
------------
I am running FreeBSD 6.1-RC on an Intel ISP 2150. The disks live in an 
IBM EXP 300 cabinet. The filesystem the database resides in is UFS with 
soft updates enabled. The logical volume the filesystem resides on is a 
RAID5 volume from an IBM Serveraid 3H controller.


MySQL error log
---------------
060414 18:05:13  InnoDB: Started; log sequence number 0 0
/usr/local/libexec/mysqld: ready for connections.
Version: '4.1.18'  socket: '/tmp/mysql.sock'  port: 3306  FreeBSD port: 
mysql-server-4.1.18_2
060414 18:06:47 [Note] /usr/local/libexec/mysqld: Normal shutdown

060414 18:06:47  InnoDB: Starting shutdown...
060414 18:06:50  InnoDB: Shutdown completed; log sequence number 0 43634
060414 18:06:50 [Note] /usr/local/libexec/mysqld: Shutdown complete

060414 18:06:50  mysqld ended

060414 18:10:29  mysqld started
InnoDB: Database page corruption on disk or a failed
InnoDB: file read of page 5.
InnoDB: You may have to recover from a backup.
060414 18:10:31  InnoDB: Page dump in ascii and hex (16384 bytes):
  len 16384; hex 9959353400000005000000
  [lots of hex data]
        ;       ;InnoDB: End of page dump
060414 18:10:32  InnoDB: Page checksum 3247215559, prior-to-4.0.14-form 
checksum 998684385
InnoDB: stored checksum 2572760372, prior-to-4.0.14-form stored checksum 
998684385
InnoDB: Page lsn 0 36828, low 4 bytes of lsn at page end 36828
InnoDB: Page number (if stored to page already) 5,
InnoDB: space id (if created with >= MySQL-4.1.1 and stored already) 0
InnoDB: Database page corruption on disk or a failed
InnoDB: file read of page 5.
InnoDB: You may have to recover from a backup.
InnoDB: It is also possible that your operating
InnoDB: system has corrupted its own file cache
InnoDB: and rebooting your computer removes the
InnoDB: error.
InnoDB: If the corrupt page is an index page
InnoDB: you can also try to fix the corruption
InnoDB: by dumping, dropping, and reimporting
InnoDB: the corrupt table. You can use CHECK
InnoDB: TABLE to scan your table for corruption.
InnoDB: See also http://dev.mysql.com/doc/mysql/en/Forcing_recovery.html
InnoDB: about forcing recovery.
InnoDB: Ending processing because of a corrupt database page.
060414 18:10:32  mysqld ended


dmesg output
------------
Copyright (c) 1992-2006 The FreeBSD Project.
Copyright (c) 1979, 1980, 1983, 1986, 1988, 1989, 1991, 1992, 1993, 1994
	The Regents of the University of California. All rights reserved.
FreeBSD 6.1-RC #2: Fri Apr 14 03:10:31 CEST 2006
     root@my.server.net:/usr/obj/usr/src/sys/CUSTOM
Timecounter "i8254" frequency 1193182 Hz quality 0
CPU: Intel Pentium III (845.64-MHz 686-class CPU)
   Origin = "GenuineIntel"  Id = 0x683  Stepping = 3
 
Features=0x383fbff<FPU,VME,DE,PSE,TSC,MSR,PAE,MCE,CX8,APIC,SEP,MTRR,PGE,MCA,CMOV,PAT,PSE36,MMX,FXSR,SSE>
real memory  = 1878982656 (1791 MB)
avail memory = 1837498368 (1752 MB)
ACPI APIC Table: <Intel  N440BX  >
FreeBSD/SMP: Multiprocessor System Detected: 2 CPUs
  cpu0 (BSP): APIC ID:  1
  cpu1 (AP): APIC ID:  0
ioapic0 <Version 1.1> irqs 0-23 on motherboard
npx0: [FAST]
npx0: <math processor> on motherboard
npx0: INT 16 interface
acpi0: <PTLTD   RSDT> on motherboard
acpi0: Power Button (fixed)
Timecounter "ACPI-safe" frequency 3579545 Hz quality 1000
acpi_timer0: <24-bit timer at 3.579545MHz> port 0xc08-0xc0b on acpi0
cpu0: <ACPI CPU> on acpi0
cpu1: <ACPI CPU> on acpi0
pcib0: <ACPI Host-PCI bridge> port 0xcf8-0xcff on acpi0
pci0: <ACPI PCI bus> on pcib0
pcib1: <PCI-PCI bridge> at device 1.0 on pci0
pci1: <PCI bus> on pcib1
pcib2: <PCI-PCI bridge> at device 15.0 on pci1
pci2: <PCI bus> on pcib2
pcib3: <PCI-PCI bridge> at device 4.0 on pci2
pci3: <PCI bus> on pcib3
ips0: <IBM ServeRAID Adapter> port 0x3000-0x30ff mem 
0xf4200000-0xf42fffff irq 20 at device 4.0 on pci3
pci0: <mass storage, SCSI> at device 12.0 (no driver attached)
pci0: <mass storage, SCSI> at device 12.1 (no driver attached)
fxp0: <Intel 82559 Pro/100 Ethernet> port 0x2800-0x283f mem 
0xf4102000-0xf4102fff,0xf4000000-0xf40fffff irq 21 at device 14.0 on pci0
miibus0: <MII bus> on fxp0
inphy0: <i82555 10/100 media interface> on miibus0
inphy0:  10baseT, 10baseT-FDX, 100baseTX, 100baseTX-FDX, auto
fxp0: Ethernet address: 00:90:27:f6:56:7a
isab0: <PCI-ISA bridge> at device 18.0 on pci0
isa0: <ISA bus> on isab0
atapci0: <Intel PIIX4 UDMA33 controller> port 
0x1f0-0x1f7,0x3f6,0x170-0x177,0x376,0x2860-0x286f at device 18.1 on pci0
ata0: <ATA channel 0> on atapci0
ata1: <ATA channel 1> on atapci0
pci0: <serial bus, USB> at device 18.2 (no driver attached)
pci0: <bridge> at device 18.3 (no driver attached)
pci0: <display, VGA> at device 20.0 (no driver attached)
atkbdc0: <Keyboard controller (i8042)> port 0x60,0x64 irq 1 on acpi0
atkbd0: <AT Keyboard> irq 1 on atkbdc0
kbd0 at atkbd0
atkbd0: [GIANT-LOCKED]
fdc0: <floppy drive controller> port 0x3f2-0x3f5 irq 6 drq 2 on acpi0
fdc0: [FAST]
fd0: <1440-KB 3.5" drive> on fdc0 drive 0
sio0: <16550A-compatible COM port> port 0x3f8-0x3ff irq 4 flags 0x10 on 
acpi0
sio0: type 16550A
sio1: configured irq 3 not in bitmap of probed irqs 0
sio1: port may not be enabled
sio1: configured irq 3 not in bitmap of probed irqs 0
sio1: port may not be enabled
orm0: <ISA Option ROMs> at iomem 0xc0000-0xc7fff,0xc8000-0xc97ff on isa0
sc0: <System console> at flags 0x100 on isa0
sc0: VGA <16 virtual consoles, flags=0x300>
sio1: configured irq 3 not in bitmap of probed irqs 0x1
sio1: port may not be enabled
vga0: <Generic ISA VGA> at port 0x3c0-0x3df iomem 0xa0000-0xbffff on isa0
Timecounters tick every 1.000 msec
ipfw2 (+ipv6) initialized, divert loadable, rule-based forwarding 
disabled, default to deny, logging unlimited
acd0: CDROM <CD-224E/1.7A> at ata0-master UDMA33
ips0: reinitializing adapter, this could take several minutes.
ips0: adapter type: ServeRAID 3H (clarinet)
ips0: logical drives: 2
ips0: Logical Drive 0: RAID5 sectors: 426565632, state OK
ips0: Logical Drive 1: RAID5 sectors: 142192640, state OK
ipsd0: <Logical Drive> on ips0
ipsd0: Logical Drive  (208284MB)
ipsd1: <Logical Drive> on ips0
ipsd1: Logical Drive  (69430MB)
SMP: AP CPU #1 Launched!
Trying to mount root from ufs:/dev/ipsd1s1a

I am grateful for any help.
Regards, Terje
-- 
Terje With Lunndal




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