Date: Thu, 12 Nov 2020 01:04:46 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv6-default][science/py-avogadrolibs] Failed for py37-avogadrolibs-1.93.0 in configure Message-ID: <202011120104.0AC14klV051951@beefy8.nyi.freebsd.org>
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Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/py-avogadrolibs/Makefile 525366 2020-02-06 07:17:20Z yuri $ Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p554788_s367522/logs/py37-avogadrolibs-1.93.0.log Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p554788_s367522 Log: =>> Building science/py-avogadrolibs build started at Thu Nov 12 01:02:59 UTC 2020 port directory: /usr/ports/science/py-avogadrolibs package name: py37-avogadrolibs-1.93.0 building for: FreeBSD head-armv6-default-job-02 13.0-CURRENT FreeBSD 13.0-CURRENT 1300128 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/py-avogadrolibs/Makefile 525366 2020-02-06 07:17:20Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300121 Jail OSVERSION: 1300128 Job Id: 02 !!! Jail is newer than host. (Jail: 1300128, Host: 1300121) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300128 UNAME_v=FreeBSD 13.0-CURRENT 1300128 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv6-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py37 DEPENDS_ARGS= MAKE_ARGS= FLAVOR=py37 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 HOME=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN ="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.7m PYTHON_LIBDIR=lib/python3.7 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.7/site-packages PYTHON_SUFFIX=37 PYTHON_VER=3.7 PYTHON_VERSION=python3.7 PYTHON2="@comment " PYTHON3="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/avogadrolibs" EXAMPLESDIR="share/examples/avogadrolibs" DATADIR="share/avogadrolibs" WWWDIR="www/avogadrolibs" ETCDIR="etc/avogadrolibs" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadrolibs DOCSDIR=/usr/local/share/doc/avogadrolibs EXAMPLESDIR=/usr/local/share/examples/avogadrolibs WWWDIR=/usr/local/www/avogadrolibs ETCDIR=/usr/local/etc/avogadrolibs --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv6 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300128 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> py37-avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.15.10.txz [head-armv6-default-job-02] Installing pkg-1.15.10... [head-armv6-default-job-02] Extracting pkg-1.15.10: .......... done ===> py37-avogadrolibs-1.93.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py37-avogadrolibs-1.93.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by py37-avogadrolibs-1.93.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by py37-avogadrolibs-1.93.0 for building => SHA256 Checksum OK for OpenChemistry-avogadrolibs-1.93.0_GH0.tar.gz. <snip> [head-armv6-default-job-02] | | `-- Extracting libevdev-1.9.1.20200928: .......... done [head-armv6-default-job-02] | | `-- Installing libinput-1.16.2... 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[head-armv6-default-job-02] | | `-- Extracting qt5-dbus-5.15.0: .......... done [head-armv6-default-job-02] | | `-- Installing qt5-network-5.15.0... [head-armv6-default-job-02] | | `-- Extracting qt5-network-5.15.0: .......... done [head-armv6-default-job-02] | | `-- Installing vulkan-headers-1.2.135.0... [head-armv6-default-job-02] | | `-- Extracting vulkan-headers-1.2.135.0: .......... done [head-armv6-default-job-02] | | `-- Installing xcb-util-image-0.4.0_1... [head-armv6-default-job-02] | | `-- Installing xcb-util-0.4.0_2,1... [head-armv6-default-job-02] | | `-- Extracting xcb-util-0.4.0_2,1: .......... done [head-armv6-default-job-02] | | `-- Extracting xcb-util-image-0.4.0_1: .......... done [head-armv6-default-job-02] | | `-- Installing xcb-util-keysyms-0.4.0_1... [head-armv6-default-job-02] | | `-- Extracting xcb-util-keysyms-0.4.0_1: ......... done [head-armv6-default-job-02] | | `-- Installing xcb-util-renderutil-0.3.9_1... 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[head-armv6-default-job-02] | | | `-- Installing mkfontscale-1.2.1... [head-armv6-default-job-02] | | | `-- Installing libfontenc-1.1.4... [head-armv6-default-job-02] | | | `-- Extracting libfontenc-1.1.4: ......... done [head-armv6-default-job-02] | | | `-- Extracting mkfontscale-1.2.1: ....... done [head-armv6-default-job-02] | | `-- Extracting dejavu-2.37_1: .......... done [head-armv6-default-job-02] | | `-- Installing font-bh-ttf-1.0.3_4... [head-armv6-default-job-02] | | `-- Extracting font-bh-ttf-1.0.3_4: .......... done [head-armv6-default-job-02] | | `-- Installing font-misc-ethiopic-1.0.4... [head-armv6-default-job-02] | | `-- Extracting font-misc-ethiopic-1.0.4: ...... done [head-armv6-default-job-02] | | `-- Installing font-misc-meltho-1.0.3_4... [head-armv6-default-job-02] | | `-- Extracting font-misc-meltho-1.0.3_4: .......... done [head-armv6-default-job-02] | `-- Extracting qt5-gui-5.15.0_1: .......... done [head-armv6-default-job-02] | `-- Installing qt5-widgets-5.15.0... [head-armv6-default-job-02] | `-- Extracting qt5-widgets-5.15.0: .......... done [head-armv6-default-job-02] `-- Extracting molequeue-0.9.0_3: .......... done [head-armv6-default-job-02] `-- Installing qt5-concurrent-5.15.0... [head-armv6-default-job-02] `-- Extracting qt5-concurrent-5.15.0: .......... done [head-armv6-default-job-02] `-- Installing spglib-1.16.0... [head-armv6-default-job-02] `-- Extracting spglib-1.16.0: .......... done [head-armv6-default-job-02] Extracting avogadrolibs-1.93.0: .......... done ===== Message from qtchooser-66_4: -- qtchooser is a wrapper that allows to specify Qt version of binaries for qmake, moc and other tools will be run when invoking the binaries in $PATH. By default, the Qt5 versions are run. It is possible to change the behavior by setting the QT_SELECT environment variable to "qtX", where X is desired Qt version, provided that it is offered by the Ports Collection. See qtchooser(1) for more information. ===== Message from freetype2-2.10.4: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). ===== Message from libxkbcommon-1.0.1: -- If arrow keys don't work under X11 switch to legacy rules e.g., For sh/bash/ksh/zsh run and (optionally) add into ~/.profile: export XKB_DEFAULT_RULES=xorg For csh/tcsh run and (optionally) add into ~/.login: setenv XKB_DEFAULT_RULES xorg ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> py37-avogadrolibs-1.93.0 depends on shared library: libAvogadroCore.so - found (/usr/local/lib/libAvogadroCore.so) ===> Returning to build of py37-avogadrolibs-1.93.0 =========================================================================== =======================<phase: configure >============================ ===> Configuring for py37-avogadrolibs-1.93.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/py-avogadrolibs/work-py37/.build CMake Warning (dev) in CMakeLists.txt: No project() command is present. The top-level CMakeLists.txt file must contain a literal, direct call to the project() command. Add a line of code such as project(ProjectName) near the top of the file, but after cmake_minimum_required(). CMake is pretending there is a "project(Project)" command on the first line. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is Clang 11.0.0 -- The CXX compiler identification is Clang 11.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /nxb-bin/usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python3: /usr/local/bin/python3.7 (found version "3.7.9") found components: Interpreter -- Found PythonLibs: /usr/local/lib/libpython3.7m.so (found suitable version "3.7.9", minimum required is "3") CMake Warning at /usr/local/share/cmake/pybind11/pybind11Common.cmake:168 (message): USE -DCMAKE_CXX_STANDARD=11 instead of PYBIND11_CPP_STANDARD Call Stack (most recent call first): /usr/local/share/cmake/pybind11/pybind11Config.cmake:249 (include) CMakeLists.txt:9 (find_package) -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Performing Test HAS_FLTO_THIN -- Performing Test HAS_FLTO_THIN - Success -- Found pybind11: /usr/local/include (found version "2.6.0" ) CMake Error at /usr/local/share/cmake/pybind11/pybind11NewTools.cmake:180 (python3_add_library): Unknown CMake command "python3_add_library". Call Stack (most recent call first): CMakeLists.txt:38 (pybind11_add_module) -- Configuring incomplete, errors occurred! See also "/wrkdirs/usr/ports/science/py-avogadrolibs/work-py37/.build/CMakeFiles/CMakeOutput.log". *** Error code 1 Stop. make: stopped in /usr/ports/science/py-avogadrolibs
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