Date: Sat, 1 Jul 2017 02:07:05 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 110armv6-quarterly][science/avogadro] Failed for avogadro-1.1.1_5 in build Message-ID: <201707010207.v61275TH067760@beefy15.nyi.freebsd.org>
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Maintainer: ports@FreeBSD.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: branches/2017Q2/science/avogadro/Makefile 430766 2017-01-07 06:08:28Z jbeich $ Log URL: http://beefy15.nyi.freebsd.org/data/110armv6-quarterly/444712/logs/avogadro-1.1.1_5.log Build URL: http://beefy15.nyi.freebsd.org/build.html?mastername=110armv6-quarterly&build=444712 Log: ====>> Building science/avogadro build started at Sat Jul 1 02:03:23 UTC 2017 port directory: /usr/ports/science/avogadro building for: FreeBSD 110armv6-quarterly-job-27 11.0-RELEASE-p10 FreeBSD 11.0-RELEASE-p10 r317487 arm maintained by: ports@FreeBSD.org Makefile ident: $FreeBSD: branches/2017Q2/science/avogadro/Makefile 430766 2017-01-07 06:08:28Z jbeich $ Poudriere version: 3.1.19-40-ga434dff0 Host OSVERSION: 1200033 Jail OSVERSION: 1100122 Job Id: 27 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1100122 UNAME_v=FreeBSD 11.0-RELEASE-p10 r317487 UNAME_r=11.0-RELEASE-p10 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/110armv6-quarterly/ref QEMU_EMULATING=1 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=avogadro-1.1.1_5 OLDPWD=/ PWD=/usr/local/poudriere/data/.m/110armv6-quarterly/ref/.p/pool MASTERNAME=110armv6-quarterly SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root POUDRIERE_VERSION=3.1.19-40-ga434dff0 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadro-1.1.1_5: PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-includes=/usr/local/include --with-extra-libs=/usr/local/lib --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- QT_SELECT=qt4 PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh QTDIR="/usr/local/lib/qt4" QMAKE="/usr/local/lib/qt4/bin/qmake" MOC="/usr/local/lib/qt4/bin/moc" RCC="/usr/local/lib/qt4/bin/rcc" UIC="/usr/local/lib/qt4/bin/uic" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-$(ccver="$(/nxb-bin/usr/bin/c++ --version)"; case "$ccver" in *clang*) echo clang ;; *) echo g++ ;; esac)" --End CONFIGURE_ENV-- --MAKE_ENV-- QT_SELECT=qt4 XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib" LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON="" NO_PYTHON="@comment " QT_BINDIR="lib/qt4/bin" QT_INCDIR="include/qt4" QT_LIBDIR="lib/qt4" QT_ARCHDIR="lib/qt4" QT_PLUGINDIR="lib/qt4/plugins" QT_LIBEXECDIR="libexec/qt4" QT_IMPORTDIR="lib/qt4/imports" QT_QMLDIR="lib/qt4/qml" QT_DATADIR="share/qt4" QT_DOCDIR="share/doc/qt4" QT_L10NDIR="share/qt4/translations" QT_EXAMPLEDIR="share/examples/qt4" QT_TESTDIR="share/qt4/tests" QT_MKSPECDIR="share/qt4/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd11 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=11.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/avogadro" EXAMPLESDIR="share/examples/avogadro" DATADIR="share/avogadro" WWWDIR="www/avogadro" ETCDIR="etc/avogadro" --End PLIST_SUB-- --SUB_LIST-- PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadro DOCSDIR=/usr/local/share/doc/avogadro EXAMPLESDIR=/usr/local/share/examples/avogadro WWWDIR=/usr/local/www/avogadro ETCDIR=/usr/local/etc/avogadro --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### ARCH=armv6 CONFIGURE_MAX_CMD_LEN=262144 OPSYS=FreeBSD OSREL=11.0 OSVERSION=1100122 PYTHONBASE=/usr/local UID=0 _JAVA_OS_LIST_REGEXP=native\|linux _JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun _JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+ _OSRELEASE=11.0-RELEASE-p10 #### Misc Poudriere #### GID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> NOTICE: The avogadro port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in <snip> -- docbook tools not found, doc targets disabled -- Configuring done CMake Warning (dev) in libavogadro/src/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "avogadro" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: openbabel;/usr/local/lib/qt4/libQtOpenGL.so;/usr/local/lib/qt4/libQtGui.so;/usr/local/lib/qt4/libQtCore.so;/usr/local/lib/libGLU.so;/usr/local/lib/libGL.so;bsdyengine;navigatetool;elementcolor LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) in libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "OpenQube" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: $<$<NOT:$<CONFIG:DEBUG>>:/usr/local/lib/qt4/libQtCore.so>;$<$<CONFIG:DEBUG>:/usr/local/lib/qt4/libQtCore.so> LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 =========================================================================== =======================<phase: build >============================ ===> Building for avogadro-1.1.1_5 /usr/local/bin/cmake -H/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 -B/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/local/bin/cmake -E cmake_progress_start /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/CMakeFiles /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/CMakeFiles/progress.marks /nxb-bin/usr/bin/make -f CMakeFiles/Makefile2 all /nxb-bin/usr/bin/make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/depend [ 1%] Generating moc_elementcolor.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors/moc_elementcolor.cxx_parameters cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors/CMakeFiles/elementcolor.dir/DependInfo.cmake Scanning dependencies of target elementcolor /nxb-bin/usr/bin/make -f libavogadro/src/colors/CMakeFiles/elementcolor.dir/build.make libavogadro/src/colors/CMakeFiles/elementcolor.dir/build [ 1%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/elementcolor.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/elementcolor.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avoga dro-1.1.1/libavogadro/src/colors/elementcolor.cpp [ 1%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/a vogadro-1.1.1/libavogadro/src/colors/moc_elementcolor.cxx [ 1%] Linking CXX static library elementcolor.a cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /usr/local/bin/cmake -P CMakeFiles/elementcolor.dir/cmake_clean_target.cmake cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/colors && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/elementcolor.dir/link.txt --verbose=1 /nxb-bin/usr/bin/ar qc elementcolor.a CMakeFiles/elementcolor.dir/elementcolor.cpp.o CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o /nxb-bin/usr/bin/ranlib elementcolor.a [ 1%] Built target elementcolor /nxb-bin/usr/bin/make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/depend [ 1%] Generating moc_bsdyengine.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/moc_bsdyengine.cxx_parameters [ 1%] Generating ui_bsdysettingswidget.h cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/lib/qt4/bin/uic -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/ui_bsdysettingswidget.h /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/bsdysettingswidget.ui cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines/CMakeFiles/bsdyengine.dir/DependInfo.cmake Scanning dependencies of target bsdyengine /nxb-bin/usr/bin/make -f libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build.make libavogadro/src/engines/CMakeFiles/bsdyengine.dir/build [ 1%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadr o-1.1.1/libavogadro/src/engines/bsdyengine.cpp [ 1%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avo gadro-1.1.1/libavogadro/src/engines/moc_bsdyengine.cxx [ 2%] Linking CXX static library bsdyengine.a cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/cmake -P CMakeFiles/bsdyengine.dir/cmake_clean_target.cmake cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/engines && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/bsdyengine.dir/link.txt --verbose=1 /nxb-bin/usr/bin/ar qc bsdyengine.a CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o /nxb-bin/usr/bin/ranlib bsdyengine.a [ 2%] Built target bsdyengine /nxb-bin/usr/bin/make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/depend [ 2%] Generating moc_navigatetool.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/moc_navigatetool.cxx_parameters [ 2%] Generating ui_navigatesettingswidget.h cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/lib/qt4/bin/uic -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/ui_navigatesettingswidget.h /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/navigatesettingswidget.ui [ 2%] Generating qrc_navigatetool.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/lib/qt4/bin/rcc -name navigatetool -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/qrc_navigatetool.cxx /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/navigatetool.qrc cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools/CMakeFiles/navigatetool.dir/DependInfo.cmake Scanning dependencies of target navigatetool /nxb-bin/usr/bin/make -f libavogadro/src/tools/CMakeFiles/navigatetool.dir/build.make libavogadro/src/tools/CMakeFiles/navigatetool.dir/build [ 2%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/navigatetool.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/navigatetool.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadr o-1.1.1/libavogadro/src/tools/navigatetool.cpp [ 2%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/eyecandy.cpp.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/eyecandy.cpp.o -c /wrkdirs/usr/ports/science/avogadro/work/avogadro-1. 1.1/libavogadro/src/tools/eyecandy.cpp [ 2%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avo gadro-1.1.1/libavogadro/src/tools/moc_navigatetool.cxx [ 2%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /nxb-bin/usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PLUGIN -DQT_SHARED -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/include -isystem /usr/local/include/qt4 -isystem /usr/local/include/qt4/QtOpenGL -isystem /usr/local/include/qt4/QtGui -isystem /usr/local/include/qt4/QtCore -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src -I/usr/local/include/eigen2 -I/usr/local/include/openbabel-2.0 -I/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing -DQT_STATICPLUGIN -fPIC -o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o -c /wrkdirs/usr/ports/science/avogadro/work/avo gadro-1.1.1/libavogadro/src/tools/qrc_navigatetool.cxx [ 2%] Linking CXX static library navigatetool.a cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/cmake -P CMakeFiles/navigatetool.dir/cmake_clean_target.cmake cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/tools && /usr/local/bin/cmake -E cmake_link_script CMakeFiles/navigatetool.dir/link.txt --verbose=1 /nxb-bin/usr/bin/ar qc navigatetool.a CMakeFiles/navigatetool.dir/navigatetool.cpp.o CMakeFiles/navigatetool.dir/eyecandy.cpp.o CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o /nxb-bin/usr/bin/ranlib navigatetool.a [ 2%] Built target navigatetool /nxb-bin/usr/bin/make -f libavogadro/src/CMakeFiles/avogadro.dir/build.make libavogadro/src/CMakeFiles/avogadro.dir/depend [ 2%] Generating moc_animation.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_animation.cxx_parameters [ 2%] Generating moc_atom.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_atom.cxx_parameters [ 2%] Generating moc_bond.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_bond.cxx_parameters [ 2%] Generating moc_color.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_color.cxx_parameters [ 2%] Generating moc_colorbutton.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_colorbutton.cxx_parameters [ 3%] Generating moc_cube.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_cube.cxx_parameters [ 3%] Generating moc_dockextension.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_dockextension.cxx_parameters [ 3%] Generating moc_dockwidget.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_dockwidget.cxx_parameters [ 3%] Generating moc_elementdetail_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_elementdetail_p.cxx_parameters [ 3%] Generating moc_elementtranslator.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_elementtranslator.cxx_parameters [ 3%] Generating moc_engine.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_engine.cxx_parameters [ 3%] Generating moc_extension.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_extension.cxx_parameters [ 3%] Generating moc_fragment.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_fragment.cxx_parameters [ 4%] Generating moc_glwidget.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_glwidget.cxx_parameters [ 4%] Generating moc_mesh.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_mesh.cxx_parameters [ 4%] Generating moc_meshgenerator.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_meshgenerator.cxx_parameters [ 4%] Generating moc_molecule.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_molecule.cxx_parameters [ 4%] Generating moc_moleculefile.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_moleculefile.cxx_parameters [ 4%] Generating moc_periodictablescene_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_periodictablescene_p.cxx_parameters [ 4%] Generating moc_periodictableview.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_periodictableview.cxx_parameters [ 4%] Generating moc_plotwidget.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_plotwidget.cxx_parameters [ 5%] Generating moc_plugin.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_plugin.cxx_parameters [ 5%] Generating moc_pluginmanager.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_pluginmanager.cxx_parameters [ 5%] Generating moc_primitive.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_primitive.cxx_parameters [ 5%] Generating moc_protein.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_protein.cxx_parameters [ 5%] Generating moc_readfilethread_p.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_readfilethread_p.cxx_parameters [ 5%] Generating moc_residue.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_residue.cxx_parameters [ 5%] Generating moc_textmatrixeditor.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_textmatrixeditor.cxx_parameters [ 5%] Generating moc_tool.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_tool.cxx_parameters [ 5%] Generating moc_toolgroup.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_toolgroup.cxx_parameters [ 6%] Generating moc_zmatrix.cxx cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/lib/qt4/bin/moc @/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/moc_zmatrix.cxx_parameters [ 6%] Generating libavogadro_ar.qm cd /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src && /usr/local/bin/lconvert -i /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/i18n/libavogadro/ar.po -o /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/libavogadro/src/libavogadro_ar.ts qemu: unhandled CPU exception 0x9 - aborting R00=00000001 R01=00000002 R02=000748a4 R03=000247e0 R04=000748a4 R05=f5023950 R06=f4ffd5c0 R07=ffff0fc0 R08=000742b0 R09=00000001 R10=f502394c R11=9fffda38 R12=9fffda48 R13=9fffda08 R14=0002446c R15=ffff0fc0 PSR=60000010 -ZC- A usr32 qemu: uncaught target signal 6 (Abort trap) - core dumped *** Signal 6 Stop. make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 *** Error code 1 Stop. make[2]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 *** Error code 1 Stop. make[1]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1 *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadro
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