Date: Sun, 8 Jul 2018 00:24:55 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r474147 - in head/science: . libccp4 Message-ID: <201807080024.w680OtAN068805@repo.freebsd.org>
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Author: yuri Date: Sun Jul 8 00:24:55 2018 New Revision: 474147 URL: https://svnweb.freebsd.org/changeset/ports/474147 Log: New port: science/libccp4: Protein X-ray crystallography toolkit Added: head/science/libccp4/ head/science/libccp4/Makefile (contents, props changed) head/science/libccp4/distinfo (contents, props changed) head/science/libccp4/pkg-descr (contents, props changed) head/science/libccp4/pkg-plist (contents, props changed) Modified: head/science/Makefile Modified: head/science/Makefile ============================================================================== --- head/science/Makefile Sun Jul 8 00:10:08 2018 (r474146) +++ head/science/Makefile Sun Jul 8 00:24:55 2018 (r474147) @@ -89,6 +89,7 @@ SUBDIR += kst2 SUBDIR += lamprop SUBDIR += libaec + SUBDIR += libccp4 SUBDIR += libcint SUBDIR += libctl SUBDIR += libefp Added: head/science/libccp4/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/libccp4/Makefile Sun Jul 8 00:24:55 2018 (r474147) @@ -0,0 +1,31 @@ +# $FreeBSD$ + +PORTNAME= libccp4 +DISTVERSION= 6.5.1 +CATEGORIES= science +MASTER_SITES= ftp://ftp.ccp4.ac.uk/opensource/ + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Protein X-ray crystallography toolkit + +LICENSE= GPLv3 LGPL3 +LICENSE_COMB= dual +LICENSE_FILE_GPLv3= ${WRKSRC}/COPYING +LICENSE_FILE_LGPL3= ${WRKSRC}/COPYING.LESSER + +LIB_DEPENDS= libmmdb2.so:science/mmdb2 + +USES= fortran gmake libtool localbase:ldflags +GNU_CONFIGURE= yes +CONFIGURE_ARGS= --enable-shared --disable-static +INSTALL_TARGET= install-strip +USE_LDCONFIG= yes + +CFLAGS+= -fPIC +FFLAGS+= -fPIC + +post-configure: + ${REINPLACE_CMD} -e 's| -Wl,--as-needed||; s| -Wl,--no-as-needed||' ${WRKSRC}/Makefile + ${REINPLACE_CMD} -e 's|^archive_cmds=|wl="-Wl,"; archive_cmds=|' ${WRKSRC}/libtool # wl is missing otherwise for some reason + +.include <bsd.port.mk> Added: head/science/libccp4/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/libccp4/distinfo Sun Jul 8 00:24:55 2018 (r474147) @@ -0,0 +1,3 @@ +TIMESTAMP = 1531007069 +SHA256 (libccp4-6.5.1.tar.gz) = 280b473d950cdf8837ef66147ec581104298b892399bd856f13b096f2395dbe5 +SIZE (libccp4-6.5.1.tar.gz) = 947521 Added: head/science/libccp4/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/libccp4/pkg-descr Sun Jul 8 00:24:55 2018 (r474147) @@ -0,0 +1,12 @@ +CCP4 exists to produce and support a world-leading, integrated suite of programs +that allows researchers to determine macromolecular structures by X-ray +crystallography, and other biophysical techniques. CCP4 aims to develop and +support the development of cutting edge approaches to experimental determination +and analysis of protein structure, and integrate these approaches into the +suite. CCP4 is a community based resource that supports the widest possible +researcher community, embracing academic, not for profit, and for profit +research. CCP4 aims to play a key role in the education and training of +scientists in experimental structural biology. It encourages the wide +dissemination of new ideas, techniques and practice. + +WWW: https://www.ccp4.ac.uk/ Added: head/science/libccp4/pkg-plist ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/libccp4/pkg-plist Sun Jul 8 00:24:55 2018 (r474147) @@ -0,0 +1,44 @@ +include/ccp4/ccp4_array.h +include/ccp4/ccp4_errno.h +include/ccp4/ccp4_file_err.h +include/ccp4/ccp4_fortran.h +include/ccp4/ccp4_general.h +include/ccp4/ccp4_parser.h +include/ccp4/ccp4_program.h +include/ccp4/ccp4_spg.h +include/ccp4/ccp4_sysdep.h +include/ccp4/ccp4_types.h +include/ccp4/ccp4_unitcell.h +include/ccp4/ccp4_utils.h +include/ccp4/ccp4_vars.h +include/ccp4/cmap_data.h +include/ccp4/cmap_errno.h +include/ccp4/cmap_header.h +include/ccp4/cmap_labels.h +include/ccp4/cmap_skew.h +include/ccp4/cmap_stats.h +include/ccp4/cmaplib.h +include/ccp4/cmaplib_f.h +include/ccp4/cmtzlib.h +include/ccp4/csymlib.h +include/ccp4/cvecmat.h +include/ccp4/library_file.h +include/ccp4/mtzdata.h +include/ccp4/overview.h +include/ccp4/pack_c.h +include/ccp4/w32mvs.h +lib/libccp4c.so +lib/libccp4c.so.0 +lib/libccp4c.so.0.0.0 +lib/libccp4f.so +lib/libccp4f.so.0 +lib/libccp4f.so.0.0.0 +libdata/pkgconfig/libccp4c.pc +libdata/pkgconfig/libccp4f.pc +share/atomsf.lib +share/atomsf_electron.lib +share/atomsf_neutron.lib +share/ccp4/ccp4-config.cmake +share/font84.ascii +share/syminfo.lib +share/symop.lib
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