From owner-svn-ports-head@freebsd.org Mon May 11 19:33:32 2020 Return-Path: Delivered-To: svn-ports-head@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id D5C0B2E955A; Mon, 11 May 2020 19:33:32 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 49LWM05Nggz3yxQ; Mon, 11 May 2020 19:33:32 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id B1CF32379E; Mon, 11 May 2020 19:33:32 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 04BJXWV7069799; Mon, 11 May 2020 19:33:32 GMT (envelope-from pkubaj@FreeBSD.org) Received: (from pkubaj@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 04BJXWu4069798; Mon, 11 May 2020 19:33:32 GMT (envelope-from pkubaj@FreeBSD.org) Message-Id: <202005111933.04BJXWu4069798@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: pkubaj set sender to pkubaj@FreeBSD.org using -f From: Piotr Kubaj Date: Mon, 11 May 2020 19:33:32 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r534934 - head/biology/hhsuite X-SVN-Group: ports-head X-SVN-Commit-Author: pkubaj X-SVN-Commit-Paths: head/biology/hhsuite X-SVN-Commit-Revision: 534934 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.33 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 11 May 2020 19:33:32 -0000 Author: pkubaj Date: Mon May 11 19:33:32 2020 New Revision: 534934 URL: https://svnweb.freebsd.org/changeset/ports/534934 Log: biology/hhsuite: fix build on powerpc64 elfv2 Use GCC instead of Clang: /usr/lib/clang/10.0.0/include/mmintrin.h:216:19: error: use of undeclared identifier '__builtin_ia32_punpckhbw' return (__m64)__builtin_ia32_punpckhbw((__v8qi)__m1, (__v8qi)__m2); Modified: head/biology/hhsuite/Makefile Modified: head/biology/hhsuite/Makefile ============================================================================== --- head/biology/hhsuite/Makefile Mon May 11 19:03:04 2020 (r534933) +++ head/biology/hhsuite/Makefile Mon May 11 19:33:32 2020 (r534934) @@ -14,7 +14,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE LIB_DEPENDS= libmpi.so:net/openmpi -USES= cmake compiler:c++11-lang perl5 python shebangfix +USES= cmake perl5 python shebangfix SHEBANG_GLOB= *.pl *.py USE_GITHUB= yes GH_ACCOUNT= soedinglab @@ -29,8 +29,11 @@ CMAKE_ON= HAVE_SSE2 .endif .if ${ARCH} == powerpc64 +USES+= compiler:gcc-c++11-lib post-patch: ${REINPLACE_CMD} -e 's/-msse -msse2/-D_ARCH_PWR8 -DNO_WARN_X86_INTRINSICS -maltivec -mpower8-vector -mvsx/g' ${WRKSRC}/src/CMakeLists.txt +.else +USES+= compiler:c++11-lang .endif .include