From owner-freebsd-emulation Thu Nov 15 10: 7:15 2001 Delivered-To: freebsd-emulation@freebsd.org Received: from lila.inti.gov.ar (lila.inti.gov.ar [200.10.161.32]) by hub.freebsd.org (Postfix) with ESMTP id 9CEAF37B417 for ; Thu, 15 Nov 2001 10:07:11 -0800 (PST) Received: from nav.inti.gov.ar ([200.10.161.45]) by lila.inti.gov.ar with smtp (Exim 3.02 #1) id 164QtG-0003Q1-00 for freebsd-emulation@freebsd.org; Thu, 15 Nov 2001 15:05:30 -0300 Received: from iib005.iib.unsam.edu.ar ([200.3.113.15]) by NAV.inti.gov.ar (NAVGW 2.5.1.12) with SMTP id M2001111515124212590 for ; Thu, 15 Nov 2001 15:12:42 -0300 Received: (from fernan@localhost) by iib005.iib.unsam.edu.ar (8.11.3/8.11.3) id fAFI6OO42285 for freebsd-emulation@freebsd.org; Thu, 15 Nov 2001 15:06:24 -0300 (ART) (envelope-from fernan) Date: Thu, 15 Nov 2001 15:06:24 -0300 From: Fernan Aguero To: freebsd-emulation@freebsd.org Subject: staden package [libc.so.6 not found] Message-ID: <20011115150624.C25858@iib005.iib.unsam.edu.ar> Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline User-Agent: Mutt/1.2.5i X-PGP-Key: http://genoma.unsam.edu.ar/~fernan/pubkey.asc Sender: owner-freebsd-emulation@FreeBSD.ORG Precedence: bulk List-ID: List-Archive: (Web Archive) List-Help: (List Instructions) List-Subscribe: List-Unsubscribe: X-Loop: FreeBSD.org Hi all! I hope this is on-topic here. I am trying to run linux binaries on FreeBSD, from the Staden Package (molecular biology). http://www.mrc-lmb.cam.ac.uk/pubseq/ The problem is that what you actually invoke is not a real binary, but a shell script that after setting some environment variables, runs the following: exec stash -f "$STADLIB/trev/trev.tcl" ${@+"$@"} which produces the following output: stash: /lib/libc.so.6: version `GLIBC_2.1.3' not found (required by stash) stash: /lib/libc.so.6: version `GLIBC_2.1.3' not found (required by /usr/local/staden/linux-bin/../lib/linux-binaries/libread.so) stash: /lib/libc.so.6: version `GLIBC_2.1.3' not found (required by /usr/local/staden/linux-bin/../lib/linux-binaries/libtk_utils.so) stash: /lib/libc.so.6: version `GLIBC_2.1.3' not found (required by /usr/local/staden/linux-bin/../lib/linux-binaries/libmisc.so) Luckily, all of the executables that I ran were all of this kind (i.e. I end up always with the stash binary giving the same error). BTW, stash is of brand Linux. The package is at /usr/local/staden, the executables are in /usr/local/staden/linux-bin, some libraries are in /usr/local/staden/lib and /usr/local/staden/lib/linux-binaries. The problem is that I have a libc.so.6 under /usr/compat/linux/lib Is there any way for me to check whether the scripts/binaries are looking for the libraries in the right place? I can provide a copy of one of the scripts that is used to launch the stash linux binary if needed. Thanks in advance, Fernan PS: please CC me so I get the answers faster. -- | F e r n a n A g u e r o | B i o i n f o r m a t i c s | | fernan@iib.unsam.edu.ar | genoma.unsam.edu.ar | To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-emulation" in the body of the message