From owner-freebsd-pkg-fallout@freebsd.org Tue Apr 3 17:42:35 2018 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 9FB93F720B3 for ; Tue, 3 Apr 2018 17:42:34 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 2C4B869693 for ; Tue, 3 Apr 2018 17:42:34 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id E08E9F720A4; Tue, 3 Apr 2018 17:42:33 +0000 (UTC) Delivered-To: pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id AD74CF720A3 for ; Tue, 3 Apr 2018 17:42:33 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 60ACB69692 for ; Tue, 3 Apr 2018 17:42:33 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy16.nyi.freebsd.org (beefy16.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:e3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 41CFE27B6E for ; Tue, 3 Apr 2018 17:42:33 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy16.nyi.freebsd.org (localhost [127.0.0.1]) by beefy16.nyi.freebsd.org (8.15.2/8.15.2) with ESMTP id w33HgXLR045686 for ; Tue, 3 Apr 2018 17:42:33 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy16.nyi.freebsd.org (8.15.2/8.15.2/Submit) id w33HgX4V045679; Tue, 3 Apr 2018 17:42:33 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Tue, 3 Apr 2018 17:42:33 GMT From: pkg-fallout@FreeBSD.org Message-Id: <201804031742.w33HgX4V045679@beefy16.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 111mips64-quarterly][biology/stacks] Failed for stacks-1.48 in configure X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.25 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 03 Apr 2018 17:42:35 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Last committer: jwb@FreeBSD.org Ident: $FreeBSD: branches/2018Q2/biology/stacks/Makefile 466048 2018-03-31 13:16:05Z jwb $ Log URL: http://beefy16.nyi.freebsd.org/data/111mips64-quarterly/466278/logs/stacks-1.48.log Build URL: http://beefy16.nyi.freebsd.org/build.html?mastername=111mips64-quarterly&build=466278 Log: =>> Building biology/stacks build started at Tue Apr 3 17:42:00 UTC 2018 port directory: /usr/ports/biology/stacks package name: stacks-1.48 building for: FreeBSD 111mips64-quarterly-job-25 11.1-RELEASE-p6 FreeBSD 11.1-RELEASE-p6 1101001 mips maintained by: jwb@FreeBSD.org Makefile ident: $FreeBSD: branches/2018Q2/biology/stacks/Makefile 466048 2018-03-31 13:16:05Z jwb $ Poudriere version: 3.2.6 Host OSVERSION: 1200060 Jail OSVERSION: 1101001 Job Id: 25 ---Begin Environment--- POUDRIEREPATH=/usr/local/bin/poudriere SCRIPTPATH=/usr/local/share/poudriere/bulk.sh OLDPWD=/usr/local/poudriere/data/.m/111mips64-quarterly/ref/.p SCRIPTPREFIX=/usr/local/share/poudriere MASTERNAME=111mips64-quarterly P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS PWD=/usr/local/poudriere/data/.m/111mips64-quarterly/ref/.p/pool SAVED_TERM= PACKAGE_BUILDING=yes POUDRIERE_BUILD_TYPE=bulk MASTERMNT=/usr/local/poudriere/data/.m/111mips64-quarterly/ref POUDRIERE_VERSION=3.2.6 LIBEXECPREFIX=/usr/local/libexec/poudriere USER=root QEMU_EMULATING=1 LOCALBASE=/usr/local PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin HOME=/root STATUS=1 MAIL=/var/mail/root BLOCKSIZE=K UNAME_r=11.1-RELEASE-p6 UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001 OSVERSION=1101001 ABI_FILE=/usr/lib/crt1.o UNAME_m=mips UNAME_p=mips64 SHELL=/bin/csh ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/stacks/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/stacks/work HOME=/wrkdirs/usr/ports/biology/stacks/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/stacks/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/stacks/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/stacks/work HOME=/wrkdirs/usr/ports/biology/stacks/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/stacks/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0 -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -lpthread" LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd11 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/stacks" EXAMPLESDIR="share/examples/stacks" DATADIR="share/stacks" WWWDIR="www/stacks" ETCDIR="etc/stacks" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/stacks DOCSDIR=/usr/local/share/doc/stacks EXAMPLESDIR=/usr/local/share/examples/stacks WWWDIR=/usr/local/www/stacks ETCDIR=/usr/local/etc/stacks --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=mips MACHINE_ARCH=mips64 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=Using built-in specs. Target: mips64-undermydesk-freebsd Configured with: FreeBSD/mips64 system compiler Thread model: posix gcc version 4.2.1 20070831 patched [FreeBSD] "/usr/bin/ld" "--eh-frame-hdr" "-EB" "-EB" "-melf64btsmip_fbsd" "--enable-new-dtags" "-dynamic-linker" "/libexec/ld-elf.so.1" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "-L/usr/lib" "/dev/null" "-lstdc++" "-lm" "-lgcc_s" "-lgcc" "-lc" "-lgcc_s" "-lgcc" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=cc1: error: unrecognized command line option "-std=c11" CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=cc1: error: unrecognized command line option "-std=gnu11" CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=cc1plus: error: unrecognized command line option "-std=c++0x" CC_OUTPUT_9d218390_f00456e5=cc1plus: error: unrecognized command line option "-std=c++11" CC_OUTPUT_9d218390_65ad290d=cc1plus: error: unrecognized command line option "-std=c++14" CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=cc1plus: error: unrecognized command line option "-std=gnu++11" _OBJC_CCVERSION_9d218390=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. _OBJC_ALTCCVERSION_9d218390=none ARCH=mips64 OPSYS=FreeBSD _OSRELEASE=11.1-RELEASE-p6 OSREL=11.1 OSVERSION=1101001 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 131072 stack size (kbytes, -s) 8192 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===> stacks-1.48 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5.txz [111mips64-quarterly-job-25] Installing pkg-1.10.5... [111mips64-quarterly-job-25] Extracting pkg-1.10.5: .......... done ===> stacks-1.48 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of stacks-1.48 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user => stacks-1.48.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch http://catchenlab.life.illinois.edu/stacks/source/stacks-1.48.tar.gz stacks-1.48.tar.gz 0 B 0 Bps ===> Fetching all distfiles required by stacks-1.48 for building =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by stacks-1.48 for building => SHA256 Checksum OK for stacks-1.48.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by stacks-1.48 for building ===> Extracting for stacks-1.48 => SHA256 Checksum OK for stacks-1.48.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for stacks-1.48 ===> Applying FreeBSD patches for stacks-1.48 =========================================================================== =================================================== ===> stacks-1.48 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_2.txz [111mips64-quarterly-job-25] Installing gmake-4.2.1_2... [111mips64-quarterly-job-25] `-- Installing gettext-runtime-0.19.8.1_1... [111mips64-quarterly-job-25] | `-- Installing indexinfo-0.3.1... [111mips64-quarterly-job-25] | `-- Extracting indexinfo-0.3.1: .... done [111mips64-quarterly-job-25] `-- Extracting gettext-runtime-0.19.8.1_1: .......... done [111mips64-quarterly-job-25] Extracting gmake-4.2.1_2: .......... done ===> stacks-1.48 depends on executable: gmake - found ===> Returning to build of stacks-1.48 ===> stacks-1.48 depends on file: /usr/local/bin/python2.7 - not found ===> Installing existing package /packages/All/python27-2.7.14_1.txz [111mips64-quarterly-job-25] Installing python27-2.7.14_1... [111mips64-quarterly-job-25] `-- Installing libffi-3.2.1_2... [111mips64-quarterly-job-25] `-- Extracting libffi-3.2.1_2: .......... done [111mips64-quarterly-job-25] `-- Installing readline-7.0.3_1... [111mips64-quarterly-job-25] `-- Extracting readline-7.0.3_1: .......... done [111mips64-quarterly-job-25] Extracting python27-2.7.14_1: .......... done Message from python27-2.7.14_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> stacks-1.48 depends on file: /usr/local/bin/python2.7 - found ===> Returning to build of stacks-1.48 =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for stacks-1.48 configure: loading site script /usr/ports/Templates/config.site checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether /nxb-bin/usr/bin/c++ accepts -g... yes checking for style of include used by gmake... GNU checking dependency style of /nxb-bin/usr/bin/c++... gcc3 checking for gcc... /nxb-bin/usr/bin/cc checking whether we are using the GNU C compiler... yes checking whether /nxb-bin/usr/bin/cc accepts -g... yes checking for /nxb-bin/usr/bin/cc option to accept ISO C89... none needed checking dependency style of /nxb-bin/usr/bin/cc... gcc3 checking whether /nxb-bin/usr/bin/cc and cc understand -c and -o together... yes checking whether /nxb-bin/usr/bin/c++ supports C++11 features by default... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with -std=gnu++11... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with -std=gnu++0x... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with -std=c++11... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with -std=c++0x... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with +std=c++11... no checking whether /nxb-bin/usr/bin/c++ supports C++11 features with -h std=c++11... no configure: error: *** A compiler with support for C++11 language features is required. ===> Script "configure" failed unexpectedly. Please report the problem to jwb@FreeBSD.org [maintainer] and attach the "/wrkdirs/usr/ports/biology/stacks/work/stacks-1.48/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** Error code 1 Stop. make: stopped in /usr/ports/biology/stacks