Date: Wed, 1 Dec 2021 15:53:31 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 70e9e19c3cb7 - main - biology/biostar-tools: Allow package build on non-amd64 systems Message-ID: <202112011553.1B1FrVrO018848@gitrepo.freebsd.org>
next in thread | raw e-mail | index | archive | help
The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=70e9e19c3cb7a11ccfef63c91beaf291ea2fb366 commit 70e9e19c3cb7a11ccfef63c91beaf291ea2fb366 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2021-12-01 15:49:28 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2021-12-01 15:49:28 +0000 biology/biostar-tools: Allow package build on non-amd64 systems Only sra-tools is still non-portable, but it will take some time to add support for other architectures. In the meantime, allow aarch64 and powerpc64 users to have a biostar-tools package. --- biology/biostar-tools/Makefile | 12 +++++++++--- biology/biostar-tools/distinfo | 2 +- 2 files changed, 10 insertions(+), 4 deletions(-) diff --git a/biology/biostar-tools/Makefile b/biology/biostar-tools/Makefile index 912c9de70b84..8e23e40fd1b7 100644 --- a/biology/biostar-tools/Makefile +++ b/biology/biostar-tools/Makefile @@ -1,5 +1,5 @@ PORTNAME= biostar-tools -PORTVERSION= 1.10.0 +PORTVERSION= 1.10.1 CATEGORIES= biology python MAINTAINER= jwb@FreeBSD.org @@ -34,7 +34,6 @@ RUN_DEPENDS= wget>0:ftp/wget \ seqtk>0:biology/seqtk \ datamash>0:textproc/datamash \ bcftools>0:biology/bcftools \ - sra-tools>0:biology/sra-tools \ subread>0:biology/subread \ hisat2>0:biology/hisat2 \ trimmomatic>0:biology/trimmomatic \ @@ -68,6 +67,13 @@ RUN_DEPENDS= wget>0:ftp/wget \ USES= metaport python +.include <bsd.port.pre.mk> + +# Allow pkg build on non-amd64 systems until sra-tools supports them +.if ${ARCH} == amd64 +RUN_DEPENDS+= sra-tools>0:biology/sra-tools +.endif + SUB_FILES= biostar-shell PLIST_FILES= bin/biostar-shell @@ -75,4 +81,4 @@ do-install: @${MKDIR} ${STAGEDIR}${PREFIX}/bin ${INSTALL_SCRIPT} ${WRKDIR}/biostar-shell ${STAGEDIR}${PREFIX}/bin -.include <bsd.port.mk> +.include <bsd.port.post.mk> diff --git a/biology/biostar-tools/distinfo b/biology/biostar-tools/distinfo index 6155e6419c60..2d706e980f0b 100644 --- a/biology/biostar-tools/distinfo +++ b/biology/biostar-tools/distinfo @@ -1 +1 @@ -TIMESTAMP = 1636577480 +TIMESTAMP = 1638373720
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202112011553.1B1FrVrO018848>