From owner-freebsd-ports-bugs@freebsd.org Wed Nov 23 15:18:06 2016 Return-Path: Delivered-To: freebsd-ports-bugs@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 401ECC51C2E for ; Wed, 23 Nov 2016 15:18:06 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 26C66FD9 for ; Wed, 23 Nov 2016 15:18:06 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id uANFI6Zm046809 for ; Wed, 23 Nov 2016 15:18:06 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 214785] math/R fails to compile after lang/gcc update on 11-RELEASE-p3 Date: Wed, 23 Nov 2016 15:18:05 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: taozhenext@gmail.com X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter cc Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Nov 2016 15:18:06 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D214785 Bug ID: 214785 Summary: math/R fails to compile after lang/gcc update on 11-RELEASE-p3 Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: freebsd-ports-bugs@FreeBSD.org Reporter: taozhenext@gmail.com CC: gerald@FreeBSD.org, jrm@freebsd.org CC: gerald@FreeBSD.org, jrm@freebsd.org Hi, I am running FreeBSD 11.0-RELEASE-p3. math/R fails to compile after lang/gcc was updated.=20 Please help. Thanks. --- R.bin --- gcc49 -std=3Dgnu99 -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/lcal/lib/gcc49 -isystem /usr/local/include -fno-strict-al= iasing -flto -Wl,--expot-dynamic -fopenmp -L../../lib -Wl,-rpath=3D/usr/local/lib/= gcc49=20 -L/usr/local/li/gcc49 -B/usr/local/bin -L/usr/local/lib -L/usr/local/lib -fstack-protector -Wl-rpath=3D/usr/local/lib/gcc49 -L/usr/local/lib/gcc49 -o R.bin Rmain.o -lR ../../lib/libR.so: undefined reference to `tre_regfree' ../../lib/libR.so: undefined reference to `tre_version' ../../lib/libR.so: undefined reference to `tre_regnexecb' ../../lib/libR.so: undefined reference to `tre_regexecb' ../../lib/libR.so: undefined reference to `tre_regerror' ../../lib/libR.so: undefined reference to `tre_regwcomp' ../../lib/libR.so: undefined reference to `tre_regaparams_default' ../../lib/libR.so: undefined reference to `tre_regncompb' ../../lib/libR.so: undefined reference to `tre_regaexec' ../../lib/libR.so: undefined reference to `tre_regaexecb' ../../lib/libR.so: undefined reference to `tre_regwexec' ../../lib/libR.so: undefined reference to `tre_regawexec' ../../lib/libR.so: undefined reference to `tre_regexec' ../../lib/libR.so: undefined reference to `tre_regcomp' ../../lib/libR.so: undefined reference to `tre_regcompb' collect2: error: ld returned 1 exit status *** [R.bin] Error code 1 make[5]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main 1 error make[5]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main *** [R] Error code 2 make[4]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main 1 error make[4]: stopped in /usr/ports/math/R/work/R-3.3.2/src/main *** [R] Error code 1 make[3]: stopped in /usr/ports/math/R/work/R-3.3.2/src 1 error make[3]: stopped in /usr/ports/math/R/work/R-3.3.2/src *** [R] Error code 1 make[2]: stopped in /usr/ports/math/R/work/R-3.3.2 1 error make[2]: stopped in /usr/ports/math/R/work/R-3.3.2 =3D=3D=3D> Compilation failed unexpectedly. --=20 You are receiving this mail because: You are the assignee for the bug.=