Date: Wed, 25 Dec 2019 14:43:37 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv7-default][science/agrum] Failed for agrum-0.16.4_1 in lib-depends Message-ID: <201912251443.xBPEhbcI025522@beefy12.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: pkubaj@FreeBSD.org Ident: $FreeBSD: head/science/agrum/Makefile 520647 2019-12-22 18:08:07Z pkubaj $ Log URL: http://beefy12.nyi.freebsd.org/data/head-armv7-default/p520767_s356047/logs/agrum-0.16.4_1.log Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=head-armv7-default&build=p520767_s356047 Log: =>> Building science/agrum build started at Wed Dec 25 14:41:45 UTC 2019 port directory: /usr/ports/science/agrum package name: agrum-0.16.4_1 building for: FreeBSD head-armv7-default-job-15 13.0-CURRENT FreeBSD 13.0-CURRENT 1300068 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/agrum/Makefile 520647 2019-12-22 18:08:07Z pkubaj $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300062 Jail OSVERSION: 1300068 Job Id: 15 !!! Jail is newer than host. (Jail: 1300068, Host: 1300062) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300068 UNAME_v=FreeBSD 13.0-CURRENT 1300068 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for agrum-0.16.4_1: ODBC=off: ODBC database backend OPENMP=on: Parallel processing support via OpenMP PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/agrum/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/agrum/work HOME=/wrkdirs/usr/ports/science/agrum/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/agrum/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/agrum/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/agrum/work HOME=/wrkdirs/usr/ports/science/agrum/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/agrum/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" DESTDIR=/wrkdirs/usr/ports/science/agrum/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="clang90" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="clang-cpp90" CPPFLAGS="" LDFLAGS=" /usr/local/llvm90/lib/libomp.so -fstack-pr otector-strong -fuse-ld=bfd " LIBS="" CXX="clang++90" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- ODBC="@comment " NO_ODBC="" OPENMP="" NO_OPENMP="@comment " PYTHON="" NO_PYTHON="@comment " PYTHON_VER_MAJ=3 CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.7m PYTHON_LIBDIR=lib/python3.7 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.7/site-packages PYTHON_SUFFIX=37 PYTHON_VER=3.7 PYTHON_VERSION=python3.7 PYTHON2="@comment " PYTHON3="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/agrum" EXAMPLESDIR="share/examples/agrum" DATADIR="share/agrum" WWWDIR="www/agrum" ETCDIR="etc/agrum" --End PLIST_SUB-- --SUB_LIST-- ODBC="@comment " NO_ODBC="" OPENMP="" NO_OPENMP="@comment " PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/agrum DOCSDIR=/usr/local/share/doc/agrum EXAMPLESDIR=/usr/local/share/examples/agrum WWWDIR=/usr/local/www/agrum ETCDIR=/usr/local/etc/agrum --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 9.0.1 (git@github.com:llvm/llvm-project.git c1a0a213378a458fbea1a5c77b315c7dce08fd05) (based on LLVM 9.0.1) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 9.0.1 (git@github.com:llvm/llvm-project.git c1a0a213378a458fbea1a5c77b315c7dce08fd05) (based on LLVM 9.0.1) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 9.0.1 (git@github.com:llvm/llvm-project.git c1a0a213378a458fbea1a5c77b315c7dce08fd05) (based on LLVM 9.0.1) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300068 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> agrum-0.16.4_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0.txz [head-armv7-default-job-15] Installing pkg-1.12.0... [head-armv7-default-job-15] Extracting pkg-1.12.0: .......... done ===> agrum-0.16.4_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of agrum-0.16.4_1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user => agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://gitlab.com/agrumery/aGrUM/repository/676cfe5833f09b013f2612ee299a9025793928d8/archive.tar.gz?dummy=/agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz fetch: https://gitlab.com/agrumery/aGrUM/repository/676cfe5833f09b013f2612ee299a9025793928d8/archive.tar.gz?dummy=/agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz: size unknown fetch: https://gitlab.com/agrumery/aGrUM/repository/676cfe5833f09b013f2612ee299a9025793928d8/archive.tar.gz?dummy=/agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz: size of remote file is not known agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar 11 MB 4098 kBps 03s ===> Fetching all distfiles required by agrum-0.16.4_1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by agrum-0.16.4_1 for building => SHA256 Checksum OK for agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by agrum-0.16.4_1 for building ===> Extracting for agrum-0.16.4_1 => SHA256 Checksum OK for agrumery-aGrUM-676cfe5833f09b013f2612ee299a9025793928d8_GL0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for agrum-0.16.4_1 ===> Applying FreeBSD patches for agrum-0.16.4_1 =========================================================================== =======================<phase: build-depends >============================ ===> agrum-0.16.4_1 depends on executable: clang90 - not found ===> Installing existing package /packages/All/llvm90-9.0.0_2.txz [head-armv7-default-job-15] Installing llvm90-9.0.0_2... [head-armv7-default-job-15] `-- Installing libedit-3.1.20190324,1... [head-armv7-default-job-15] `-- Extracting libedit-3.1.20190324,1: .......... done [head-armv7-default-job-15] `-- Installing libxml2-2.9.10... [head-armv7-default-job-15] `-- Extracting libxml2-2.9.10: .......... done [head-armv7-default-job-15] `-- Installing perl5-5.30.1... [head-armv7-default-job-15] `-- Extracting perl5-5.30.1: .......... done [head-armv7-default-job-15] `-- Installing python37-3.7.6... [head-armv7-default-job-15] | `-- Installing gettext-runtime-0.20.1... [head-armv7-default-job-15] | | `-- Installing indexinfo-0.3.1... [head-armv7-default-job-15] | | `-- Extracting indexinfo-0.3.1: .... done [head-armv7-default-job-15] | `-- Extracting gettext-runtime-0.20.1: .......... done [head-armv7-default-job-15] | `-- Installing libffi-3.2.1_3... [head-armv7-default-job-15] | `-- Extracting libffi-3.2.1_3: .......... done [head-armv7-default-job-15] | `-- Installing readline-8.0.0_1... [head-armv7-default-job-15] | `-- Extracting readline-8.0.0_1: .......... done [head-armv7-default-job-15] `-- Extracting python37-3.7.6: .......... done [head-armv7-default-job-15] Extracting llvm90-9.0.0_2: .......... done ===== Message from perl5-5.30.1: -- The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===== Message from python37-3.7.6: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===> agrum-0.16.4_1 depends on executable: clang90 - found ===> Returning to build of agrum-0.16.4_1 ===> agrum-0.16.4_1 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.15.5.txz [head-armv7-default-job-15] Installing cmake-3.15.5... [head-armv7-default-job-15] `-- Installing curl-7.67.0... [head-armv7-default-job-15] | `-- Installing ca_root_nss-3.48... [head-armv7-default-job-15] | `-- Extracting ca_root_nss-3.48: ........ done [head-armv7-default-job-15] | `-- Installing libnghttp2-1.40.0... [head-armv7-default-job-15] | `-- Extracting libnghttp2-1.40.0: .......... done [head-armv7-default-job-15] `-- Extracting curl-7.67.0: .......... done [head-armv7-default-job-15] `-- Installing expat-2.2.8... [head-armv7-default-job-15] `-- Extracting expat-2.2.8: .......... done [head-armv7-default-job-15] `-- Installing jsoncpp-1.8.1_7... [head-armv7-default-job-15] `-- Extracting jsoncpp-1.8.1_7: .......... done [head-armv7-default-job-15] `-- Installing libarchive-3.4.0,1... [head-armv7-default-job-15] | `-- Installing liblz4-1.9.2,1... [head-armv7-default-job-15] | `-- Extracting liblz4-1.9.2,1: .......... done [head-armv7-default-job-15] | `-- Installing lzo2-2.10_1... [head-armv7-default-job-15] | `-- Extracting lzo2-2.10_1: .......... done [head-armv7-default-job-15] `-- Extracting libarchive-3.4.0,1: .......... done [head-armv7-default-job-15] `-- Installing libuv-1.34.0... [head-armv7-default-job-15] `-- Extracting libuv-1.34.0: .......... done [head-armv7-default-job-15] `-- Installing rhash-1.3.5... [head-armv7-default-job-15] `-- Extracting rhash-1.3.5: .......... done [head-armv7-default-job-15] Extracting cmake-3.15.5: .......... done ===== Message from ca_root_nss-3.48: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> agrum-0.16.4_1 depends on file: /usr/local/bin/cmake - found ===> Returning to build of agrum-0.16.4_1 ===> agrum-0.16.4_1 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.9.0,2.txz [head-armv7-default-job-15] Installing ninja-1.9.0,2... [head-armv7-default-job-15] Extracting ninja-1.9.0,2: ......... done ===> agrum-0.16.4_1 depends on executable: ninja - found ===> Returning to build of agrum-0.16.4_1 ===> agrum-0.16.4_1 depends on file: /usr/local/bin/python3.7 - found ===> agrum-0.16.4_1 depends on file: /usr/local/bin/as - not found ===> Installing existing package /packages/All/binutils-2.33.1,1.txz [head-armv7-default-job-15] Installing binutils-2.33.1,1... [head-armv7-default-job-15] Extracting binutils-2.33.1,1: .......... done ===> agrum-0.16.4_1 depends on file: /usr/local/bin/as - found ===> Returning to build of agrum-0.16.4_1 =========================================================================== =======================<phase: lib-depends >============================ ===> agrum-0.16.4_1 depends on shared library: libomp.so - not found ===> Installing existing package /packages/All/llvm90-9.0.0_2.txz [head-armv7-default-job-15] Installing llvm90-9.0.0_2... the most recent version of llvm90-9.0.0_2 is already installed ===> agrum-0.16.4_1 depends on shared library: libomp.so - not found *** Error code 1 Stop. make: stopped in /usr/ports/science/agrum
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