From owner-svn-ports-head@FreeBSD.ORG Mon Jan 20 17:02:12 2014 Return-Path: Delivered-To: svn-ports-head@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 3F6C6E3E; Mon, 20 Jan 2014 17:02:12 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id 120491436; Mon, 20 Jan 2014 17:02:12 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.7/8.14.7) with ESMTP id s0KH2B4B071790; Mon, 20 Jan 2014 17:02:11 GMT (envelope-from bapt@svn.freebsd.org) Received: (from bapt@localhost) by svn.freebsd.org (8.14.7/8.14.7/Submit) id s0KH2BuP071788; Mon, 20 Jan 2014 17:02:11 GMT (envelope-from bapt@svn.freebsd.org) Message-Id: <201401201702.s0KH2BuP071788@svn.freebsd.org> From: Baptiste Daroussin Date: Mon, 20 Jan 2014 17:02:11 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r340411 - head/biology/iolib X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 20 Jan 2014 17:02:12 -0000 Author: bapt Date: Mon Jan 20 17:02:11 2014 New Revision: 340411 URL: http://svnweb.freebsd.org/changeset/ports/340411 QAT: https://qat.redports.org/buildarchive/r340411/ Log: Support stage Conver USE_GMAKE Modified: head/biology/iolib/Makefile head/biology/iolib/pkg-plist Modified: head/biology/iolib/Makefile ============================================================================== --- head/biology/iolib/Makefile Mon Jan 20 17:00:57 2014 (r340410) +++ head/biology/iolib/Makefile Mon Jan 20 17:02:11 2014 (r340411) @@ -11,24 +11,13 @@ MASTER_SITE_SUBDIR= staden/${PORTNAME}/$ MAINTAINER= culot@FreeBSD.org COMMENT= General purpose trace file (and Experiment File) reading interface -LICENSE= BSD +LICENSE= BSD3CLAUSE LIB_DEPENDS= libcurl.so:${PORTSDIR}/ftp/curl +USES= gmake USE_AUTOTOOLS= libtool:env GNU_CONFIGURE= yes -USE_GMAKE= yes USE_LDCONFIG= yes -MAN1= scramble.1 srf_index_hash.1 srf_info.1 srf_list.1 \ - srf2fasta.1 srf2fastq.1 -MAN3= read_scf_header.3 read_allocate.3 ExperimentFile.3 \ - write_reading.3 write_scf.3 read_deallocate.3 \ - fwrite_reading.3 read2scf.3 scf2read.3 \ - fwrite_scf.3 write_scf_header.3 read_reading.3 \ - read_scf.3 exp2read.3 fread_reading.3 \ - read2exp.3 fread_scf.3 -MAN4= Read.4 - -NO_STAGE= yes .include Modified: head/biology/iolib/pkg-plist ============================================================================== --- head/biology/iolib/pkg-plist Mon Jan 20 17:00:57 2014 (r340410) +++ head/biology/iolib/pkg-plist Mon Jan 20 17:02:11 2014 (r340411) @@ -84,4 +84,28 @@ lib/libstaden-read.a lib/libstaden-read.la lib/libstaden-read.so lib/libstaden-read.so.3 +man/man1/scramble.1.gz +man/man1/srf2fasta.1.gz +man/man1/srf2fastq.1.gz +man/man1/srf_index_hash.1.gz +man/man1/srf_info.1.gz +man/man1/srf_list.1.gz +man/man3/ExperimentFile.3.gz +man/man3/exp2read.3.gz +man/man3/fread_reading.3.gz +man/man3/fread_scf.3.gz +man/man3/fwrite_reading.3.gz +man/man3/fwrite_scf.3.gz +man/man3/read2exp.3.gz +man/man3/read2scf.3.gz +man/man3/read_allocate.3.gz +man/man3/read_deallocate.3.gz +man/man3/read_reading.3.gz +man/man3/read_scf.3.gz +man/man3/read_scf_header.3.gz +man/man3/scf2read.3.gz +man/man3/write_reading.3.gz +man/man3/write_scf.3.gz +man/man3/write_scf_header.3.gz +man/man4/Read.4.gz @dirrm include/io_lib