From owner-svn-ports-all@freebsd.org Mon Dec 3 23:04:25 2018 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id E40D6130E0F5; Mon, 3 Dec 2018 23:04:24 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 87380737DE; Mon, 3 Dec 2018 23:04:24 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 635F11C926; Mon, 3 Dec 2018 23:04:24 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id wB3N4Owh078730; Mon, 3 Dec 2018 23:04:24 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id wB3N4OcR078729; Mon, 3 Dec 2018 23:04:24 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201812032304.wB3N4OcR078729@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Mon, 3 Dec 2018 23:04:24 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r486561 - head/biology/gatk X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: head/biology/gatk X-SVN-Commit-Revision: 486561 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 87380737DE X-Spamd-Result: default: False [-0.23 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-0.38)[-0.376,0]; NEURAL_SPAM_SHORT(0.15)[0.146,0]; NEURAL_SPAM_LONG(0.00)[0.005,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US] X-Rspamd-Server: mx1.freebsd.org X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 03 Dec 2018 23:04:25 -0000 Author: yuri Date: Mon Dec 3 23:04:23 2018 New Revision: 486561 URL: https://svnweb.freebsd.org/changeset/ports/486561 Log: biology/gatk: Change gradle4->gradle because it builds fine with both gradle 4 and 5 Modified: head/biology/gatk/Makefile Modified: head/biology/gatk/Makefile ============================================================================== --- head/biology/gatk/Makefile Mon Dec 3 22:28:10 2018 (r486560) +++ head/biology/gatk/Makefile Mon Dec 3 23:04:23 2018 (r486561) @@ -13,7 +13,7 @@ COMMENT= Variant discovery in high-throughput sequenci LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.TXT -BUILD_DEPENDS= gradle4:devel/gradle4 +BUILD_DEPENDS= gradle:devel/gradle USES= gettext-runtime USE_GITHUB= yes @@ -34,7 +34,7 @@ post-extract: # to rebuild the deps archive: 1. remove @cd ${DEPS_CACHE_DIR} && ${TAR} xzf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX} do-build: - @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle4 \ + @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \ --gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \ --offline --build-cache localJar