Date: Fri, 22 Nov 2019 04:07:08 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [exp - 120amd64-default-build-as-user][science/bagel] Failed for bagel-1.2.2_4 in build Message-ID: <201911220407.xAM478xP098123@package19.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: head/science/bagel/Makefile 509290 2019-08-19 15:35:27Z jbeich $ Log URL: http://package19.nyi.freebsd.org/data/120amd64-default-build-as-user/518059/logs/bagel-1.2.2_4.log Build URL: http://package19.nyi.freebsd.org/build.html?mastername=120amd64-default-build-as-user&build=518059 Log: =>> Building science/bagel build started at Fri Nov 22 02:39:54 UTC 2019 port directory: /usr/ports/science/bagel package name: bagel-1.2.2_4 building for: FreeBSD 120amd64-default-build-as-user-job-06 12.0-RELEASE-p12 FreeBSD 12.0-RELEASE-p12 amd64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/bagel/Makefile 509290 2019-08-19 15:35:27Z jbeich $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300047 Jail OSVERSION: 1200086 Job Id: 06 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1200086 UNAME_v=FreeBSD 12.0-RELEASE-p12 UNAME_r=12.0-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/poudriere/data/.m/120amd64-default-build-as-user/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= GID=0 UID=0 PWD=/poudriere/data/.m/120amd64-default-build-as-user/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=120amd64-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/poudriere/data/.m/120amd64-default-build-as-user/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for bagel-1.2.2_4: LIBXC=on: Build DFT with libxc MPI=on: MPI (Message Passing Interface) support SCALAPACK=on: Use ScaLapack library for parallelized linear algebra SMITH=on: Compile SMITH generated code ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --datarootdir=/usr/local/share/bagel --with-libxc --with-mpi=openmpi --enable-scalapack --enable-smith --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/bagel/work HOME=/wrkdirs/usr/ports/science/bagel/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/bagel/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/bagel/work HOME=/wrkdirs/usr/ports/science/bagel/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/bagel/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" 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MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=12.0-RELEASE-p12 OSREL=12.0 OSVERSION=1200086 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> bagel-1.2.2_4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0.txz [120amd64-default-build-as-user-job-06] Installing pkg-1.12.0... [120amd64-default-build-as-user-job-06] Extracting pkg-1.12.0: .......... done ===> bagel-1.2.2_4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of bagel-1.2.2_4 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2_4 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2_4 for building => SHA256 Checksum OK for nubakery-bagel-v1.2.2_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2_4 for building ===> Extracting for bagel-1.2.2_4 => SHA256 Checksum OK for nubakery-bagel-v1.2.2_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for bagel-1.2.2_4 ===> Applying FreeBSD patches for bagel-1.2.2_4 =========================================================================== =======================<phase: build-depends >============================ ===> bagel-1.2.2_4 depends on executable: gfortran9 - not found ===> Installing existing package /packages/All/gcc9-9.2.0.txz [120amd64-default-build-as-user-job-06] Installing gcc9-9.2.0... [120amd64-default-build-as-user-job-06] `-- Installing binutils-2.33.1,1... [120amd64-default-build-as-user-job-06] | `-- Installing gettext-runtime-0.20.1... [120amd64-default-build-as-user-job-06] | | `-- Installing indexinfo-0.3.1... [120amd64-default-build-as-user-job-06] | | `-- Extracting indexinfo-0.3.1: .... done [120amd64-default-build-as-user-job-06] | `-- Extracting gettext-runtime-0.20.1: .......... done [120amd64-default-build-as-user-job-06] `-- Extracting binutils-2.33.1,1: .......... done [120amd64-default-build-as-user-job-06] `-- Installing gmp-6.1.2_1... [120amd64-default-build-as-user-job-06] `-- Extracting gmp-6.1.2_1: .......... done [120amd64-default-build-as-user-job-06] `-- Installing mpc-1.1.0_2... [120amd64-default-build-as-user-job-06] | `-- Installing mpfr-4.0.2... [120amd64-default-build-as-user-job-06] | `-- Extracting mpfr-4.0.2: .......... done [120amd64-default-build-as-user-job-06] `-- Extracting mpc-1.1.0_2: ......... done [120amd64-default-build-as-user-job-06] Extracting gcc9-9.2.0: .......... done ===== <snip> In file included from ../../../src/ci/zfci/zharrison.h:33: In file included from ../../../src/wfn/method.h:28: In file included from ../../../src/wfn/geometry.h:29: In file included from ../../../src/df/df.h:28: In file included from ../../../src/df/paralleldf.h:29: In file included from ../../../src/df/dfinttask_old.h:28: ./../../src/integral/rys/rysintegral.h:153:18: warning: 'compute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void compute() = 0; ^ ./../../src/integral/rys/rysintegral.h:173:30: note: in instantiation of template class 'bagel::RysIntegral<double, bagel::Int_t::Standard>' requested here extern template class bagel::RysIntegral<double,bagel::Int_t::Standard>; ^ ./../../src/integral/integral.h:42:18: note: overridden virtual function is here virtual void compute() = 0; ^ In file included from zcasnoopt.cc:26: In file included from ../../../src/multi/zcasscf/zcasnoopt.h:28: In file included from ../../../src/multi/zcasscf/zcasscf.h:28: In file included from ../../../src/ci/zfci/zharrison.h:33: In file included from ../../../src/wfn/method.h:28: In file included from ../../../src/wfn/geometry.h:29: In file included from ../../../src/df/df.h:28: In file included from ../../../src/df/paralleldf.h:29: In file included from ../../../src/df/dfinttask_old.h:28: ./../../src/integral/rys/rysintegral.h:153:18: warning: 'compute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void compute() = 0; ^ ./../../src/integral/rys/rysintegral.h:174:30: note: in instantiation of template class 'bagel::RysIntegral<std::__1::complex<double>, bagel::Int_t::London>' requested here extern template class bagel::RysIntegral<std::complex<double>,bagel::Int_t::London>; ^ ./../../src/integral/integral.h:42:18: note: overridden virtual function is here virtual void compute() = 0; ^ In file included from zcasnoopt.cc:29: In file included from ../../../src/mat1e/rel/relhcore.h:32: In file included from ../../../src/mat1e/rel/small1e.h:30: In file included from ../../../src/integral/smallints1e.h:30: In file included from ../../../src/integral/rys/eribatch.h:28: ./../../src/integral/rys/eribatch_base.h:41:18: warning: 'root_weight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void root_weight(const int ps) = 0; ^ ./../../src/integral/rys/eribatch_base.h:95:30: note: in instantiation of template class 'bagel::ERIBatch_Base<double, bagel::Int_t::Standard>' requested here extern template class bagel::ERIBatch_Base<double,bagel::Int_t::Standard>; ^ ./../../src/integral/rys/rysintegral.h:92:18: note: overridden virtual function is here virtual void root_weight(const int ps) = 0; ^ In file included from zcasnoopt.cc:29: In file included from ../../../src/mat1e/rel/relhcore.h:32: In file included from ../../../src/mat1e/rel/small1e.h:30: In file included from ../../../src/integral/smallints1e.h:30: In file included from ../../../src/integral/rys/eribatch.h:28: ./../../src/integral/rys/eribatch_base.h:41:18: warning: 'root_weight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void root_weight(const int ps) = 0; ^ ./../../src/integral/rys/eribatch_base.h:96:30: note: in instantiation of template class 'bagel::ERIBatch_Base<std::__1::complex<double>, bagel::Int_t::London>' requested here extern template class bagel::ERIBatch_Base<std::complex<double>,bagel::Int_t::London>; ^ ./../../src/integral/rys/rysintegral.h:92:18: note: overridden virtual function is here virtual void root_weight(const int ps) = 0; ^ In file included from zcasnoopt.cc:29: In file included from ../../../src/mat1e/rel/relhcore.h:32: In file included from ../../../src/mat1e/rel/small1e.h:31: In file included from ../../../src/integral/rys/naibatch.h:28: In file included from ../../../src/integral/rys/coulombbatch_energy.h:28: ./../../src/integral/rys/coulombbatch_base.h:50:18: warning: 'root_weight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void root_weight(const int ps) = 0; ^ ./../../src/integral/rys/coulombbatch_base.h:99:30: note: in instantiation of template class 'bagel::CoulombBatch_Base<double, bagel::Int_t::Standard>' requested here extern template class bagel::CoulombBatch_Base<double>; ^ ./../../src/integral/rys/rysintegral.h:92:18: note: overridden virtual function is here virtual void root_weight(const int ps) = 0; ^ In file included from zcasnoopt.cc:29: In file included from ../../../src/mat1e/rel/relhcore.h:32: In file included from ../../../src/mat1e/rel/small1e.h:31: In file included from ../../../src/integral/rys/naibatch.h:28: In file included from ../../../src/integral/rys/coulombbatch_energy.h:28: ./../../src/integral/rys/coulombbatch_base.h:50:18: warning: 'root_weight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void root_weight(const int ps) = 0; ^ ./../../src/integral/rys/coulombbatch_base.h:100:30: note: in instantiation of template class 'bagel::CoulombBatch_Base<std::__1::complex<double>, bagel::Int_t::London>' requested here extern template class bagel::CoulombBatch_Base<std::complex<double>,bagel::Int_t::London>; ^ ./../../src/integral/rys/rysintegral.h:92:18: note: overridden virtual function is here virtual void root_weight(const int ps) = 0; ^ 7 warnings generated. mv -f .deps/zcasnoopt.Tpo .deps/zcasnoopt.Plo /bin/sh ../../../libtool --tag=CXX --mode=link mpicxx -I../../.. -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++11 -L/usr/local/lib -lcblas -lscalapack -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -o libbagel_zcasscf.la zcasscf.lo zcassecond.lo zcassecond_compute.lo zqvec.lo zcasnoopt.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lscalapack -L/usr/local/lib libtool: link: /usr/local/bin/ar cru .libs/libbagel_zcasscf.a .libs/zcasscf.o .libs/zcassecond.o .libs/zcassecond_compute.o .libs/zqvec.o .libs/zcasnoopt.o /usr/local/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: /usr/local/bin/ranlib .libs/libbagel_zcasscf.a libtool: link: ( cd ".libs" && rm -f "libbagel_zcasscf.la" && ln -s "../libbagel_zcasscf.la" "libbagel_zcasscf.la" ) gmake[5]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/multi/zcasscf' gmake[5]: Entering directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/multi' gmake[5]: Nothing to be done for 'all-am'. gmake[5]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/multi' gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/multi' Making all in smith gmake[4]: Entering directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/smith' depbase=`echo smith_info.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -isystem /usr/local/include -I/usr/local/include -I../.. -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++11 -MT smith_info.lo -MD -MP -MF $depbase.Tpo -c -o smith_info.lo smith_info.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -isystem /usr/local/include -I/usr/local/include -I../.. -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++11 -MT smith_info.lo -MD -MP -MF .deps/smith_info.Tpo -c smith_info.cc -fPIC -DPIC -o .libs/smith_info.o In file included from smith_info.cc:28: In file included from ../../src/smith/smith_info.h:28: In file included from ../../src/wfn/relreference.h:28: In file included from ../../src/wfn/reference.h:30: In file included from ../../src/mat1e/hcore.h:29: In file included from ../../src/wfn/hcoreinfo.h:29: In file included from ../../src/molecule/molecule.h:29: In file included from ../../src/molecule/atom.h:29: In file included from ../../src/molecule/shell.h:29: ./../src/util/math/zmatrix.h:73:18: warning: 'diagonalize' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void diagonalize(VecView vec); ^ ./../src/util/math/matrix_base.h:123:18: note: overridden virtual function is here virtual void diagonalize(VecView vec) = 0; ^ In file included from smith_info.cc:28: In file included from ../../src/smith/smith_info.h:28: In file included from ../../src/wfn/relreference.h:28: In file included from ../../src/wfn/reference.h:32: In file included from ../../src/wfn/geometry.h:29: In file included from ../../src/df/df.h:28: In file included from ../../src/df/paralleldf.h:29: In file included from ../../src/df/dfinttask_old.h:28: ./../src/integral/rys/rysintegral.h:153:18: warning: 'compute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void compute() = 0; ^ ./../src/integral/rys/rysintegral.h:173:30: note: in instantiation of template class 'bagel::RysIntegral<double, bagel::Int_t::Standard>' requested here extern template class bagel::RysIntegral<double,bagel::Int_t::Standard>; ^ ./../src/integral/integral.h:42:18: note: overridden virtual function is here virtual void compute() = 0; ^ In file included from smith_info.cc:28: In file included from ../../src/smith/smith_info.h:28: In file included from ../../src/wfn/relreference.h:28: In file included from ../../src/wfn/reference.h:32: In file included from ../../src/wfn/geometry.h:29: In file included from ../../src/df/df.h:28: In file included from ../../src/df/paralleldf.h:29: In file included from ../../src/df/dfinttask_old.h:28: ./../src/integral/rys/rysintegral.h:153:18: warning: 'compute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void compute() = 0; ^ ./../src/integral/rys/rysintegral.h:174:30: note: in instantiation of template class 'bagel::RysIntegral<std::__1::complex<double>, bagel::Int_t::London>' requested here extern template class bagel::RysIntegral<std::complex<double>,bagel::Int_t::London>; ^ ./../src/integral/integral.h:42:18: note: overridden virtual function is here virtual void compute() = 0; ^ In file included from smith_info.cc:30: In file included from ../../src/ci/fci/fci.h:29: ./../src/ci/fci/fci_base.h:154:46: warning: 'conv_to_ref' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual std::shared_ptr<const Reference> conv_to_ref() const = 0; ^ ./../src/wfn/method.h:57:46: note: overridden virtual function is here virtual std::shared_ptr<const Reference> conv_to_ref() const = 0; ^ In file included from smith_info.cc:30: ./../src/ci/fci/fci.h:95:18: warning: 'update' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void update(std::shared_ptr<const Matrix>) = 0; ^ ./../src/ci/fci/fci_base.h:104:18: note: overridden virtual function is here virtual void update(std::shared_ptr<const Matrix>) = 0; ^ c++: error: unable to execute command: Killed c++: error: clang frontend command failed due to signal (use -v to see invocation) FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin c++: note: diagnostic msg: PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script. c++: note: diagnostic msg: ******************** PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT: Preprocessed source(s) and associated run script(s) are located at: c++: note: diagnostic msg: /tmp/smith_info-f78b0b.cpp c++: note: diagnostic msg: /tmp/smith_info-f78b0b.sh c++: note: diagnostic msg: ******************** gmake[4]: *** [Makefile:1558: smith_info.lo] Error 1 gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src/smith' gmake[3]: *** [Makefile:640: all-recursive] Error 1 gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2/src' gmake[2]: *** [Makefile:421: all-recursive] Error 1 gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2' gmake[1]: *** [Makefile:353: all] Error 2 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2' *** Error code 1 Stop. make: stopped in /usr/ports/science/bagel
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