Date: Sat, 18 Sep 2021 19:57:05 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 114amd64-default][science/axom] Failed for axom-0.5.0 in build Message-ID: <202109181957.18IJv58G091813@beefy9.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy9.nyi.freebsd.org/data/114amd64-default/724df9e52627/logs/axom-0.5.0.log Build URL: http://beefy9.nyi.freebsd.org/build.html?mastername=114amd64-default&build=724df9e52627 Log: =>> Building science/axom build started at Sat Sep 18 19:52:48 UTC 2021 port directory: /usr/ports/science/axom package name: axom-0.5.0 building for: FreeBSD 114amd64-default-job-09 11.4-RELEASE-p13 FreeBSD 11.4-RELEASE-p13 amd64 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400008 Jail OSVERSION: 1104001 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1104001 UNAME_v=FreeBSD 11.4-RELEASE-p13 UNAME_r=11.4-RELEASE-p13 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/114amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/114amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=114amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/114amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/axom/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/axom/work HOME=/wrkdirs/usr/ports/science/axom/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/axom/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/axom/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/axom/work HOME=/wrkdirs/usr/ports/science/axom/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/axom/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/axom/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -lexecinfo -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=11.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/axom" EXAMPLESDIR="share/examples/axom" DATADIR="share/axom" WWWDIR="www/axom" ETCDIR="etc/axom" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/axom DOCSDIR=/usr/local/share/doc/axom EXAMPLESDIR=/usr/local/share/examples/axom WWWDIR=/usr/local/www/axom ETCDIR=/usr/local/etc/axom --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: x86_64-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=11.4-RELEASE-p13 OSREL=11.4 OSVERSION=1104001 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> axom-0.5.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.1.pkg [114amd64-default-job-09] Installing pkg-1.17.1... [114amd64-default-job-09] Extracting pkg-1.17.1: .......... done ===> axom-0.5.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of axom-0.5.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by axom-0.5.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by axom-0.5.0 for building => SHA256 Checksum OK for LLNL-axom-v0.5.0_GH0.tar.gz. => SHA256 Checksum OK for LLNL-axom_data-517e53e_GH0.tar.gz. => SHA256 Checksum OK for LLNL-blt-7ec2cb8_GH0.tar.gz. => SHA256 Checksum OK for LLNL-uberenv-a121a45_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by axom-0.5.0 for building ===> Extracting for axom-0.5.0 => SHA256 Checksum OK for LLNL-axom-v0.5.0_GH0.tar.gz. => SHA256 Checksum OK for LLNL-axom_data-517e53e_GH0.tar.gz. => SHA256 Checksum OK for LLNL-blt-7ec2cb8_GH0.tar.gz. => SHA256 Checksum OK for LLNL-uberenv-a121a45_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for axom-0.5.0 ===> Applying FreeBSD patches for axom-0.5.0 from /usr/ports/science/axom/files =========================================================================== =======================<phase: build-depends >============================ ===> axom-0.5.0 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.21.0.pkg [114amd64-default-job-09] Installing cmake-3.21.0... [114amd64-default-job-09] `-- Installing curl-7.78.0... [114amd64-default-job-09] | `-- Installing ca_root_nss-3.69_1... [114amd64-default-job-09] | `-- Extracting ca_root_nss-3.69_1: ........ done [114amd64-default-job-09] | `-- Installing libnghttp2-1.44.0... [114amd64-default-job-09] | `-- Extracting libnghttp2-1.44.0: .......... done [114amd64-default-job-09] | `-- Installing libssh2-1.9.0_3,3... [114amd64-default-job-09] | `-- Extracting libssh2-1.9.0_3,3: .......... done [114amd64-default-job-09] `-- Extracting curl-7.78.0: .......... done [114amd64-default-job-09] `-- Installing expat-2.4.1... [114amd64-default-job-09] `-- Extracting expat-2.4.1: .......... done <snip> behavior and not rely on setting a policy to OLD. Call Stack (most recent call first): CMakeLists.txt:64 (include) -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Git Support is OFF -- MPI Support is OFF -- OpenMP Support is OFF -- CUDA Support is OFF -- HIP Support is OFF -- HCC Support is OFF -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Sphinx support is ON -- Failed to locate Sphinx executable (missing: SPHINX_EXECUTABLE) -- Valgrind support is ON -- Failed to locate Valgrind executable (missing: VALGRIND_EXECUTABLE) -- AStyle support is OFF -- ClangFormat support is ON -- Failed to locate ClangFormat executable (missing: CLANGFORMAT_EXECUTABLE) -- Uncrustify support is OFF -- Yapf support is ON -- Failed to locate Yapf executable (missing: YAPF_EXECUTABLE) -- CMakeFormat support is ON -- Failed to locate CMakeFormat executable (missing: CMAKEFORMAT_EXECUTABLE) -- Cppcheck support is ON -- Failed to locate Cppcheck executable (missing: CPPCHECK_EXECUTABLE) -- ClangQuery support is ON -- Failed to locate ClangQuery executable (missing: CLANGQUERY_EXECUTABLE) -- ClangTidy support is OFF -- C Compiler family is Clang -- Adding optional BLT definitions and compiler flags -- Setting CMAKE_CXX_EXTENSIONS to Off -- Standard C++11 selected -- Enabling all compiler warnings on all targets. -- Fortran support disabled. -- CMAKE_C_FLAGS flags are: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -- CMAKE_CXX_FLAGS flags are: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -- CMAKE_EXE_LINKER_FLAGS flags are: -lexecinfo -fstack-protector-strong -- Google Test Support is ON -- Google Mock Support is OFF CMake Deprecation Warning at cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. -- Found PythonInterp: /usr/local/bin/python3.8 (found version "3.8.12") -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Umpire support is OFF -- RAJA support is OFF -- HDF5 support is OFF -- Conduit was built with HDF5 Support -- Looking for HDF5 at: /usr/local -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.10.6") -- HDF5_DIR_REAL=/usr/local -- Checking that found HDF5_INCLUDE_DIRS are in HDF5_DIR -- HDF5_INCLUDE_DIRS=/usr/local/include -- /usr/local/include includes HDF5_DIR (/usr/local) -- /usr/local/include includes HDF5_REAL_DIR () -- HDF5 is parallel: FALSE -- Found Conduit: /usr/local (found version 0.7.2) -- CONDUIT_VERSION = 0.7.2 -- CONDUIT_INSTALL_PREFIX = /usr/local -- CONDUIT_IMPORT_ROOT = /usr/local -- CONDUIT_USE_CXX11 = TRUE -- CONDUIT_USE_FMT = TRUE -- CONDUIT_INCLUDE_DIRS = /usr/local/include/conduit -- CONDUIT_FORTRAN_ENABLED = TRUE -- CONDUIT_PYTHON_ENABLED = -- CONDUIT_PYTHON_EXECUTABLE = -- CONDUIT_PYTHON_MODULE_DIR = /usr/local/python-modules/ -- Conduit Relay features: -- CONDUIT_RELAY_HDF5_ENABLED = TRUE -- CONDUIT_HDF5_DIR = /usr/local -- CONDUIT_RELAY_ADIOS_ENABLED = FALSE -- CONDUIT_ADIOS_DIR = -- CONDUIT_RELAY_SILO_ENABLED = TRUE -- CONDUIT_SILO_DIR = /usr/local -- CONDUIT_RELAY_MPI_ENABLED = TRUE -- Conduit imported targets: conduit::conduit conduit::conduit_mpi -- MFEM support is OFF -- Shroud support is OFF -- SCR support is OFF -- LUA support is OFF -- Building shared libraries (BUILD_SHARED_LIBS == ON) -- SOL Enabled: FALSE -- Sparsehash configured with '<functional>' header -- Axom Component Lumberjack turned off due to ENABLE_MPI=OFF -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Axom component slic is ON -- Axom component slam is ON -- Axom component primal is ON -- Axom component sidre is ON -- Axom component mint is ON -- Axom component spin is ON -- Axom component inlet is ON -- Axom component quest is ON -- AXOM_DATA_DIR: /wrkdirs/usr/ports/science/axom/work/axom-0.5.0/data -- Configuring Axom version v0.5.0 -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE -- Build files have been written to: /wrkdirs/usr/ports/science/axom/work/.build =========================================================================== =======================<phase: build >============================ ===> Building for axom-0.5.0 [ 1% 1/64] /usr/bin/c++ -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_DEATH_TEST=0 -Dgtest_main_EXPORTS -I/wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/include -I/wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Wall -Wshadow -Wconversion -DGTEST_HAS_PTHREAD=1 -fexceptions -W -Wpointer-arith -Wreturn-type -Wcast-qual -Wwrite-strings -Wswitch -Wunused-parameter -Wcast-align -Wchar-subscripts -Winline -Wredundant-decls -pthread -std=c++11 -MD -MT blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeFiles/gtest_main.dir/src/gtest_main.cc.o -MF blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeFiles/gtest_main.dir/src/gtest_main.cc.o.d -o blt/thirdparty_builtin/googletest-maste r-2020-01-07/googletest/CMakeFiles/gtest_main.dir/src/gtest_main.cc.o -c /wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/src/gtest_main.cc [ 3% 2/64] /usr/bin/c++ -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_DEATH_TEST=0 -Dgtest_EXPORTS -I/wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/include -I/wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Wall -Wshadow -Wconversion -DGTEST_HAS_PTHREAD=1 -fexceptions -W -Wpointer-arith -Wreturn-type -Wcast-qual -Wwrite-strings -Wswitch -Wunused-parameter -Wcast-align -Wchar-subscripts -Winline -Wredundant-decls -pthread -std=c++11 -MD -MT blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o blt/thirdparty_builtin/googletest-master-2020-01-07/goog letest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /wrkdirs/usr/ports/science/axom/work/axom-0.5.0/src/cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/src/gtest-all.cc [ 4% 3/64] : && /usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -lexecinfo -fstack-protector-strong -shared -Wl,-soname,libgtest.so -o lib/libgtest.so blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -pthread && : [ 6% 4/64] : && /usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -lexecinfo 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