From owner-cvs-ports@FreeBSD.ORG Sat May 7 03:29:59 2011 Return-Path: Delivered-To: cvs-ports@FreeBSD.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 55E581065680; Sat, 7 May 2011 03:29:59 +0000 (UTC) (envelope-from bf@FreeBSD.org) Received: from repoman.freebsd.org (repoman.freebsd.org [IPv6:2001:4f8:fff6::29]) by mx1.freebsd.org (Postfix) with ESMTP id 3BD128FC08; Sat, 7 May 2011 03:29:59 +0000 (UTC) Received: from repoman.freebsd.org (localhost [127.0.0.1]) by repoman.freebsd.org (8.14.4/8.14.4) with ESMTP id p473TxY5013975; Sat, 7 May 2011 03:29:59 GMT (envelope-from bf@repoman.freebsd.org) Received: (from bf@localhost) by repoman.freebsd.org (8.14.4/8.14.4/Submit) id p473TxAw013974; Sat, 7 May 2011 03:29:59 GMT (envelope-from bf) Message-Id: <201105070329.p473TxAw013974@repoman.freebsd.org> From: Brendan Fabeny Date: Sat, 7 May 2011 03:29:59 +0000 (UTC) To: ports-committers@FreeBSD.org, cvs-ports@FreeBSD.org, cvs-all@FreeBSD.org X-FreeBSD-CVS-Branch: HEAD Cc: Subject: cvs commit: ports/math/R Makefile distinfo pkg-plist ports/math/R/files patch-tests__reg-tests-1b.R ports/math/R-cran-mvtnorm Makefile ports/math/rpy Makefile pkg-plist ports/math/R-cran-car Makefile ports/math/R-cran-RSvgDevice Makefile ports/math/rkward ... X-BeenThere: cvs-ports@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: CVS commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 07 May 2011 03:29:59 -0000 bf 2011-05-07 03:29:59 UTC FreeBSD ports repository Modified files: math/R Makefile distinfo pkg-plist math/R-cran-mvtnorm Makefile math/rpy Makefile pkg-plist math/R-cran-car Makefile math/R-cran-RSvgDevice Makefile math/rkward Makefile pkg-plist science/R-cran-AMORE Makefile math/rkward-kde4 Makefile pkg-plist math/R-cran-sp Makefile math/R-cran-psych Makefile math/R-cran-gpclib Makefile math/rpy2 Makefile math/R-cran-sm Makefile math/R-cran-Zelig Makefile science/R-cran-bayesm Makefile math/p5-Statistics-R Makefile math/R-cran-coda Makefile math/R-cran-inline Makefile Added files: math/rkward-kde4/files patch-rkward_rbackend_FindR.cmake Removed files: math/R/files patch-tests__reg-tests-1b.R Log: - update to 2.13.0 - switch to the bundled Rblas and Rlapack by default (this can be changed by setting BLAS and LAPACK) which favors correctness in some corner cases over a slight performance penalty; this will be revisited after the blas and lapack updates - replace the STATIC_LIBR option with a LIBR option (on by default): if on, libR.a and libR.so are installed, and R is linked to libR.so. Otherwise, R is static, and no libRs are installed. - remove the superfluous copy of libR.so in ${LOCALBASE}/lib [1] - enable the cairo and pango elements in the X11() graphics device by default, controlled by new PANGOCAIRO option - add a few small patches to dependent ports, bumping PORTREVISION where necessary PR: 153309 [1] Approved by: thierry (rkward*), wen (rpy*, R-cran-*) Revision Changes Path 1.11 +1 -1 ports/math/R-cran-RSvgDevice/Makefile 1.12 +1 -1 ports/math/R-cran-Zelig/Makefile 1.13 +1 -1 ports/math/R-cran-car/Makefile 1.5 +1 -0 ports/math/R-cran-coda/Makefile 1.12 +1 -1 ports/math/R-cran-gpclib/Makefile 1.9 +1 -0 ports/math/R-cran-inline/Makefile 1.2 +1 -0 ports/math/R-cran-mvtnorm/Makefile 1.6 +1 -0 ports/math/R-cran-psych/Makefile 1.13 +1 -0 ports/math/R-cran-sm/Makefile 1.14 +1 -0 ports/math/R-cran-sp/Makefile 1.96 +78 -39 ports/math/R/Makefile 1.46 +2 -2 ports/math/R/distinfo 1.3 +0 -19 ports/math/R/files/patch-tests__reg-tests-1b.R (dead) 1.50 +109 -7 ports/math/R/pkg-plist 1.2 +1 -0 ports/math/p5-Statistics-R/Makefile 1.42 +8 -4 ports/math/rkward-kde4/Makefile 1.1 +11 -0 ports/math/rkward-kde4/files/patch-rkward_rbackend_FindR.cmake (new) 1.25 +2 -0 ports/math/rkward-kde4/pkg-plist 1.34 +6 -2 ports/math/rkward/Makefile 1.14 +1 -0 ports/math/rkward/pkg-plist 1.24 +8 -2 ports/math/rpy/Makefile 1.15 +1 -1 ports/math/rpy/pkg-plist 1.25 +8 -2 ports/math/rpy2/Makefile 1.2 +1 -0 ports/science/R-cran-AMORE/Makefile 1.2 +1 -0 ports/science/R-cran-bayesm/Makefile