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Date:      Wed, 10 Feb 2021 02:00:23 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 130releng-armv7-quarterly][science/qmcpack] Failed for qmcpack-3.10.0 in configure
Message-ID:  <202102100200.11A20Nm7077342@beefy12.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: yuri@FreeBSD.org
Ident:          $FreeBSD: branches/2021Q1/science/qmcpack/Makefile 555002 2020-11-13 05:10:06Z yuri $
Log URL:        http://beefy12.nyi.freebsd.org/data/130releng-armv7-quarterly/564165/logs/qmcpack-3.10.0.log
Build URL:      http://beefy12.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=564165
Log:

=>> Building science/qmcpack
build started at Wed Feb 10 01:58:52 UTC 2021
port directory: /usr/ports/science/qmcpack
package name: qmcpack-3.10.0
building for: FreeBSD 130releng-armv7-quarterly-job-03 13.0-BETA1 FreeBSD 13.0-BETA1 1300139 arm
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: branches/2021Q1/science/qmcpack/Makefile 555002 2020-11-13 05:10:06Z yuri $
Poudriere version: 3.2.8-8-gaf08dbda
Host OSVERSION: 1300134
Jail OSVERSION: 1300139
Job Id: 03




!!! Jail is newer than host. (Jail: 1300139, Host: 1300134) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   qmcpack-3.10.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.16.1.txz
[130releng-armv7-quarterly-job-03] Installing pkg-1.16.1...
[130releng-armv7-quarterly-job-03] Extracting pkg-1.16.1: .......... done
===>   qmcpack-3.10.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of qmcpack-3.10.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by qmcpack-3.10.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by qmcpack-3.10.0 for building
<snip>
=====
Message from python37-3.7.9_1:

--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py37-gdbm       databases/py-gdbm@py37
py37-sqlite3    databases/py-sqlite3@py37
py37-tkinter    x11-toolkits/py-tkinter@py37
===>   qmcpack-3.10.0 depends on file: /usr/local/bin/python3.7 - found
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   qmcpack-3.10.0 depends on shared library: libboost_system.so - not found
===>   Installing existing package /packages/All/boost-libs-1.72.0_3.txz
[130releng-armv7-quarterly-job-03] Installing boost-libs-1.72.0_3...
[130releng-armv7-quarterly-job-03] `-- Installing icu-68.2,1...
[130releng-armv7-quarterly-job-03] `-- Extracting icu-68.2,1: .......... done
[130releng-armv7-quarterly-job-03] Extracting boost-libs-1.72.0_3: .......... done
=====
Message from boost-libs-1.72.0_3:

--
You have built the Boost library with thread support.

Don't forget to add -pthread to your linker options when
linking your code.
===>   qmcpack-3.10.0 depends on shared library: libboost_system.so - found (/usr/local/lib/libboost_system.so)
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on shared library: libfftw3.so - not found
===>   Installing existing package /packages/All/fftw3-3.3.9.txz
[130releng-armv7-quarterly-job-03] Installing fftw3-3.3.9...
[130releng-armv7-quarterly-job-03] Extracting fftw3-3.3.9: .......... done
===>   qmcpack-3.10.0 depends on shared library: libfftw3.so - found (/usr/local/lib/libfftw3.so)
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on shared library: libhdf5.so - not found
===>   Installing existing package /packages/All/hdf5-1.10.6,1.txz
[130releng-armv7-quarterly-job-03] Installing hdf5-1.10.6,1...
[130releng-armv7-quarterly-job-03] `-- Installing hdf-szip-2.1.1...
[130releng-armv7-quarterly-job-03] `-- Extracting hdf-szip-2.1.1: .......... done
[130releng-armv7-quarterly-job-03] Extracting hdf5-1.10.6,1: .......... done
===>   qmcpack-3.10.0 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so)
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on shared library: libmpich.so - not found
===>   Installing existing package /packages/All/mpich-3.2.1_6.txz
[130releng-armv7-quarterly-job-03] Installing mpich-3.2.1_6...
[130releng-armv7-quarterly-job-03] `-- Installing hwloc-1.11.13...
[130releng-armv7-quarterly-job-03] |   `-- Installing libpciaccess-0.16...
[130releng-armv7-quarterly-job-03] |   | `-- Installing pciids-20201127...
[130releng-armv7-quarterly-job-03] |   | `-- Extracting pciids-20201127: ..... done
[130releng-armv7-quarterly-job-03] |   `-- Extracting libpciaccess-0.16: ......... done
[130releng-armv7-quarterly-job-03] |   `-- Installing libxml2-2.9.10_2...
[130releng-armv7-quarterly-job-03] |   `-- Extracting libxml2-2.9.10_2: .......... done
[130releng-armv7-quarterly-job-03] `-- Extracting hwloc-1.11.13: .......... done
[130releng-armv7-quarterly-job-03] `-- Installing perl5-5.32.1_1...
[130releng-armv7-quarterly-job-03] `-- Extracting perl5-5.32.1_1: .......... done
[130releng-armv7-quarterly-job-03] Extracting mpich-3.2.1_6: .......... done
=====
Message from mpich-3.2.1_6:

--
===>   NOTICE:

The mpich port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===>   qmcpack-3.10.0 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so)
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on shared library: libopenblas.so - not found
===>   Installing existing package /packages/All/openblas-0.3.12,1.txz
[130releng-armv7-quarterly-job-03] Installing openblas-0.3.12,1...
[130releng-armv7-quarterly-job-03] Extracting openblas-0.3.12,1: .......... done
===>   qmcpack-3.10.0 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so)
===>   Returning to build of qmcpack-3.10.0
===>   qmcpack-3.10.0 depends on shared library: libsz.so - found (/usr/local/lib/libsz.so)
===>   qmcpack-3.10.0 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for qmcpack-3.10.0
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/qmcpack/work/.build
-- The C compiler identification is Clang 11.0.1
-- The CXX compiler identification is Clang 11.0.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
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-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /nxb-bin/usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python3: /usr/local/bin/python3.7 (found version "3.7.9") found components: Interpreter 
env: python3: No such file or directory
-- Unable to import PySCF python module. PySCF tests will not be run.
-- QMC_SYMLINK_TEST_FILES = ON.  Using symbolic links for large test files may cause test failures if the build is installed on a separate filesystem from the source.  For example, Titan at OLCF.
-- CMAKE_BUILD_TYPE is RELEASE
-- defining the float point precision
   Base precision = double
   Full precision = double
-- Looking for posix_memalign
-- Looking for posix_memalign - found
-- Looking for dlfcn.h
-- Looking for dlfcn.h - found
-- Looking for inttypes.h
-- Looking for inttypes.h - found
-- Looking for memory.h
-- Looking for memory.h - found
-- Looking for sys/stat.h
-- Looking for sys/stat.h - found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for unistd.h
-- Looking for unistd.h - found
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Trying to figure out .....
-- Compiler: Clang
-- libstdc++/C++ compiler version compatibility check failed
CMake Error at CMake/Testlibstdc++.cmake:30 (message):
  Change Dir:
  /wrkdirs/usr/ports/science/qmcpack/work/.build/CMakeFiles/CMakeTmp

  

  Run Build Command(s):/usr/bin/make cmTC_724b6/fast && /nxb-bin/usr/bin/make
  -f CMakeFiles/cmTC_724b6.dir/build.make CMakeFiles/cmTC_724b6.dir/build

  Building CXX object CMakeFiles/cmTC_724b6.dir/try_libstdcxx.cpp.o

  /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem
  /usr/local/include -fno-strict-aliasing -I/usr/local/include/catch2
  -isystem /usr/local/include -fopenmp -fstrict-aliasing
  -D__forceinline=inline -Wvla -Wall -Wno-unused-variable
  -Wno-overloaded-virtual -Wno-unused-private-field -Wno-unused-local-typedef
  -Wno-unknown-pragmas -Wmisleading-indentation -std=c++14 -o
  CMakeFiles/cmTC_724b6.dir/try_libstdcxx.cpp.o -c
  /wrkdirs/usr/ports/science/qmcpack/work/.build/CMakeFiles/CMakeTmp/try_libstdcxx.cpp


  Linking CXX executable cmTC_724b6

  /usr/local/bin/cmake -E cmake_link_script
  CMakeFiles/cmTC_724b6.dir/link.txt --verbose=1

  /nxb-bin/usr/bin/c++ -O2 -pipe -fstack-protector-strong -isystem
  /usr/local/include -fno-strict-aliasing -I/usr/local/include/catch2
  -isystem /usr/local/include -fopenmp -fstrict-aliasing
  -D__forceinline=inline -Wvla -Wall -Wno-unused-variable
  -Wno-overloaded-virtual -Wno-unused-private-field -Wno-unused-local-typedef
  -Wno-unknown-pragmas -Wmisleading-indentation
  -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin
  -fstack-protector-strong -L/usr/local/lib
  CMakeFiles/cmTC_724b6.dir/try_libstdcxx.cpp.o -o cmTC_724b6

  /usr/local/bin/ld: cannot find -lomp

  c++: error: linker command failed with exit code 1 (use -v to see
  invocation)

  *** Error code 1

  

  Stop.

  make[2]: stopped in
  /wrkdirs/usr/ports/science/qmcpack/work/.build/CMakeFiles/CMakeTmp

  *** Error code 1

  

  Stop.

  make[1]: stopped in
  /wrkdirs/usr/ports/science/qmcpack/work/.build/CMakeFiles/CMakeTmp

  

Call Stack (most recent call first):
  CMakeLists.txt:412 (include)


-- Configuring incomplete, errors occurred!
See also "/wrkdirs/usr/ports/science/qmcpack/work/.build/CMakeFiles/CMakeOutput.log".
*** Error code 1

Stop.
make: stopped in /usr/ports/science/qmcpack



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