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Date: Thu, 12 Mar 2009 08:50:00 -0500
From: "James R. Van Artsdalen" <james-freebsd-current@jrv.org>
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To: Nick Hilliard <nick-lists@netability.ie>
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Cc: Alexander Motin <mav@mavhome.dp.ua>, freebsd-current@freebsd.org
Subject: Re: SiI3531 SATA port multipler
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Nick Hilliard wrote:
> However, I replaced the SiI3531 with a JMB366 card, and have attached
> the results of a verbose boot.

Looking at the code I think some of the AHCI timeouts are very short. 
Try changing ata_ahci_issue_cmd() to wait at 31 seconds in the command
completion poll loop.  bootverbose will cause it to say how long it
actually took vs. the timeout requested.