Date: Fri, 4 Jul 2014 18:47:50 GMT From: pkg-fallout-builder@FreeBSD.org To: makc@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [REL - 91i386-default][math/scilab] Failed for scilab-5.3.3_9 in configure Message-ID: <201407041847.s64IloG8071035@beefy1.isc.freebsd.org>
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Maintainer: makc@FreeBSD.org Last committer: makc@FreeBSD.org Ident: $FreeBSD: head/math/scilab/Makefile 352097 2014-04-25 08:46:05Z makc $ Log URL: http://beefy1.isc.freebsd.org/bulk/91i386-default/2014-07-04_11h29m05s/logs/scilab-5.3.3_9.log Build URL: http://beefy1.isc.freebsd.org/bulk/91i386-default/2014-07-04_11h29m05s Log: ====>> Building math/scilab build started at Fri Jul 4 18:47:00 UTC 2014 port directory: /usr/ports/math/scilab building for: FreeBSD 91i386-default-job-15 9.1-RELEASE-p13 FreeBSD 9.1-RELEASE-p13 i386 maintained by: makc@FreeBSD.org Makefile ident: $FreeBSD: head/math/scilab/Makefile 352097 2014-04-25 08:46:05Z makc $ Poudriere version: 3.1-pre Host OSVERSION: 1100022 Jail OSVERSION: 901000 ---Begin Environment--- UNAME_m=i386 UNAME_p=i386 OSVERSION=901000 UNAME_v=FreeBSD 9.1-RELEASE-p13 UNAME_r=9.1-RELEASE-p13 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/build/91i386-default/ref PKG_EXT=txz tpid=23421 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNG=1 PKGNAME=scilab-5.3.3_9 PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f PKG_ADD=/usr/local/sbin/pkg-static add OLDPWD=/usr/local/poudriere/data/build/91i386-default/ref/poudriere/rdeps PWD=/usr/local/poudriere/data/build/91i386-default/ref/poudriere/pool MASTERNAME=91i386-default USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes PKG_VERSION=/poudriere/pkg-static version PKG_BIN=/usr/local/sbin/pkg-static ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for scilab-5.3.3_9: ATLAS=off: Use Atlas instead of Blas FFTW=on: Discrete Fourier Transform support GUI=on: Build GUI (requires Java) HELP=on: Help Browser (Java based, requires GUI) MATIO=off: Matlab compatibility NLS=on: Native Language Support OCAML=off: Build OCaml modelica compiler (requires GUI) PVM=off: Parallel Virtual Machine support TK=off: Tk GUI toolkit support UMFPACK=off: Build with umfpack ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-gfortran --without-hdf5 --enable-build-localization --without-tk --with-jdk=/usr/local/openjdk7 --with-docbook=/usr/local/share/xsl/docbook --enable-build-help --enable-build-swig --without-pvm --without-umfpack --without-matio --without-modelica --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_search_pthread_join="-pthread" BLAS_LIBS="-lblas" LAPACK_LIBS="-llapack" XDG_DATA_HOME=/wrkdirs/usr/ports/math/scilab/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/scilab/work HOME=/wrkdirs/usr/ports/math/scilab/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/math/scilab/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/scilab/work HOME=/wrkdirs/usr/ports/math/scilab/work TMPDIR="/tmp" F77="gfortran47" FC="gfortran47" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc47" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc47" MAKE=gmake PKG_CONFIG=pkgconf SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/co nfig.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- HOME=/dev/null XDG_DATA_HOME=/wrkdirs/usr/ports/math/scilab/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/scilab/work HOME=/wrkdirs/usr/ports/math/scilab/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/math/scilab/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/scilab/work HOME=/wrkdirs/usr/ports/math/scilab/work TMPDIR="/tmp" F77="gfortran47" FC="gfortran47" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc47" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc47" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS= "-I/usr/local/include" LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc47 -L/usr/local/lib/gcc47 -B/usr/local/bin" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --PLIST_SUB-- NLS="" WITHOUT_GUI="@comment " OCAML="@comment " JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=9.1 PREFIX=%D LOCALBASE=/usr/local PORTDOCS="" PORTEXAMPLES="" PORTDATA="" LIB32DIR=lib DOCSDIR="share/doc/scilab" EXAMPLESDIR="share/examples/scilab" DATADIR="share/scilab" WWWDIR="www/scilab" ETCDIR="etc/scilab" --End PLIST_SUB-- --SUB_LIST-- JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="1.6+" JAVA_VENDOR="openjdk" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/scilab DOCSDIR=/usr/local/share/doc/scilab EXAMPLESDIR=/usr/local/share/examples/scilab WWWDIR=/usr/local/www/scilab ETCDIR=/usr/local/etc/scilab --End SUB_LIST-- ---Begin make.conf--- ARCH=i386 MACHINE=i386 MACHINE_ARCH=i386 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes # clean-restricted via poudriere.conf NO_RESTRICTED #NO_RESTRICTED=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ===> Cleaning for scilab-5.3.3_9 =======================<phase: check-sanity >============================ =========================================================================== =======================<phase: pkg-depends >============================ ===> scilab-5.3.3_9 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.2.7_3.txz Installing pkg-1.2.7_3... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of scilab-5.3.3_9 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> Fetching all distfiles required by scilab-5.3.3_9 for building =========================================================================== =======================<phase: checksum >============================ ===> Fetching all distfiles required by scilab-5.3.3_9 for building => SHA256 Checksum OK for scilab-5.3.3-src.tar.gz. => SHA256 Checksum OK for saxon6-5-5.zip. => SHA256 Checksum OK for jgraphx-1_4_1_0.jar. =========================================================================== =======================<phase: extract-depends>============================ ===> scilab-5.3.3_9 depends on file: /usr/local/bin/unzip - not found ===> Verifying install for /usr/local/bin/unzip in /usr/ports/archivers/unzip ===> Installing existing package /packages/All/unzip-6.0_1.txz Installing unzip-6.0_1... done ===> Returning to build of scilab-5.3.3_9 =========================================================================== =======================<phase: extract >============================ ===> Fetching all distfiles required by scilab-5.3.3_9 for building ===> Extracting for scilab-5.3.3_9 => SHA256 Checksum OK for scilab-5.3.3-src.tar.gz. => SHA256 Checksum OK for saxon6-5-5.zip. => SHA256 Checksum OK for jgraphx-1_4_1_0.jar. Archive: /portdistfiles/saxon6-5-5.zip inflating: /wrkdirs/usr/ports/math/scilab/work/scilab-5.3.3/thirdparty/saxon.jar =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for scilab-5.3.3_9 ===> Applying extra patch /usr/ports/math/scilab/files/extra-patch-bin-JAVA_HOME ===> Applying FreeBSD patches for scilab-5.3.3_9 =========================================================================== =======================<phase: build-depends >============================ ===> scilab-5.3.3_9 depends on file: /usr/local/share/java/classes/flexdock.jar - not found ===> Verifying install for /usr/local/share/java/classes/flexdock.jar in /usr/ports/devel/flexdock ===> Installing existing package /packages/All/flexdock-1.2.4.txz Installing flexdock-1.2.4...Installing openjdk-7.60.19_1,1...Installing alsa-lib-1.0.27.2_2... done Installing dejavu-2.34_3... done Installing freetype2-2.5.3_2... done Installing java-zoneinfo-2014.e... done Installing javavmwrapper-2.5... done Installing libX11-1.6.2_2,1...Installing kbproto-1.0.6... done Installing libXau-1.0.8_2...Installing xproto-7.0.25... done done Installing libXdmcp-1.1.1_2... done Installing libxcb-1.10_2...Installing libpthread-stubs-0.3_5... done Installing libxml2-2.9.1_1...Installing libiconv-1.14_3... done done done done Installing libXext-1.3.2_2,1...Installing xextproto-7.3.0... done done Installing libXi-1.7.2_2,1...Installing inputproto-2.3... done Installing libXfixes-5.0.1_2...Installing fixesproto-5.0... done done done Installing libXrender-0.9.8_2...Installing renderproto-0.11.1... done done Installing libXt-1.1.4_2,1...Installing libSM-1.2.2_2,1...Installing libICE-1.0.8_2,1... done done done Installing libXtst-1.2.2_2...Installing recordproto-1.14.2... done done <snip> done done done Installing docbook-xml-5.0_2...Installing xmlcharent-0.3_2... done done Installing sdocbook-xml-1.1_1,2... done done done The following catalogs are installed: 1) /usr/local/share/sgml/catalog The top level catalog for SGML stuff. It is not changed by any ports/packages except textproc/xmlcatmgr. 2) /usr/local/share/sgml/catalog.ports This catalog is for handling SGML stuff installed under /usr/local/share/sgml. It is changed by ports/packages. 3) /usr/local/share/xml/catalog The top level catalog for XML stuff. It is not changed by any ports/packages except textproc/xmlcatmgr. 4) /usr/local/share/xml/catalog.ports This catalog is for handling XML stuff installed under /usr/local/share/xml. It is changed by ports/packages. ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on executable: xsltproc - not found ===> Verifying install for xsltproc in /usr/ports/textproc/libxslt ===> Installing existing package /packages/All/libxslt-1.1.28_3.txz Installing libxslt-1.1.28_3...Installing libgcrypt-1.5.3_2...Installing indexinfo-0.2... done Installing libgpg-error-1.13_1...Installing gettext-0.18.3.1_1... done done done done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on file: /usr/local/share/java/classes/commons-beanutils.jar - not found ===> Verifying install for /usr/local/share/java/classes/commons-beanutils.jar in /usr/ports/java/jakarta-commons-beanutils ===> Installing existing package /packages/All/jakarta-commons-beanutils-1.9.2.txz Installing jakarta-commons-beanutils-1.9.2...Installing jakarta-commons-collections-3.2.1... done done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on executable: ant - not found ===> Verifying install for ant in /usr/ports/devel/apache-ant ===> Installing existing package /packages/All/apache-ant-1.9.3.txz Installing apache-ant-1.9.3... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on executable: swig - not found ===> Verifying install for swig in /usr/ports/devel/swig13 ===> Installing existing package /packages/All/swig13-1.3.40.txz Installing swig13-1.3.40... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on file: /usr/local/openjdk7/bin/java - found ===> scilab-5.3.3_9 depends on executable: gfortran47 - not found ===> Verifying install for gfortran47 in /usr/ports/lang/gcc ===> Installing existing package /packages/All/gcc-4.7.3_1.txz Installing gcc-4.7.3_1...Installing binutils-2.24... done Installing gcc-ecj-4.5... done Installing gmp-5.1.3_2... done Installing mpc-1.0.2...Installing mpfr-3.1.2_2... done done done To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc47 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on executable: gmake - not found ===> Verifying install for gmake in /usr/ports/devel/gmake ===> Installing existing package /packages/All/gmake-3.82_1.txz Installing gmake-3.82_1... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on executable: pkgconf - not found ===> Verifying install for pkgconf in /usr/ports/devel/pkgconf ===> Installing existing package /packages/All/pkgconf-0.9.6.txz Installing pkgconf-0.9.6... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on file: /usr/local/bin/as - found ===> scilab-5.3.3_9 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found =========================================================================== =======================<phase: lib-depends >============================ ===> scilab-5.3.3_9 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so.2.9.1) ===> scilab-5.3.3_9 depends on shared library: libpcre.so - not found ===> Verifying for libpcre.so in /usr/ports/devel/pcre ===> Installing existing package /packages/All/pcre-8.34_1.txz Installing pcre-8.34_1... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on shared library: liblapack.so - not found ===> Verifying for liblapack.so in /usr/ports/math/lapack ===> Installing existing package /packages/All/lapack-3.4.2_2.txz Installing lapack-3.4.2_2...Installing blas-3.4.2_2... done done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so.2) ===> scilab-5.3.3_9 depends on shared library: libfftw3.so - not found ===> Verifying for libfftw3.so in /usr/ports/math/fftw3 ===> Installing existing package /packages/All/fftw3-3.3.3_1.txz Installing fftw3-3.3.3_1... done ===> Returning to build of scilab-5.3.3_9 ===> scilab-5.3.3_9 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so.9) =========================================================================== =======================<phase: configure >============================ ===> Configuring for scilab-5.3.3_9 configure: loading site script /usr/ports/Templates/config.site checking whether ln -s works... yes checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no ac: no checking for _LARGEFILE64_SOURCE value needed for large files... unknown checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel checking build system type... i386-portbld-freebsd9.1 checking host system type... i386-portbld-freebsd9.1 checking for ld used by GCC... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for shared library path variable... LD_LIBRARY_PATH checking whether to activate relocatable installation... no checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for shared library run path origin... done checking whether to enable maintainer-specific portions of Makefiles... no checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking for style of include used by gmake... GNU checking dependency style of cc... gcc3 checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking pkg-config is at least version 0.9.0... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran47 accepts -g... yes checking if gfortran47 is a fortran 90 compatible compiler... yes checking size of int... 4 checking size of long... 4 checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... gcc3 checking whether cc understands -c and -o together... yes checking whether gfortran47 understands -c and -o together... yes checking for nm... /usr/local/bin/nm checking for leading underscores with Fortran (name-mangling scheme)... no checking for trailing underscores with Fortran (name-mangling scheme)... yes checking use of the sharpsign in CPP... yes Define C2F with Trailing Underscore and Sharp Sign checking for clock_gettime in -lrt... yes Use JDK path specified (/usr/local/openjdk7) checking JAVA_HOME variable... not defined checking for zip or jar files to include on CLASSPATH... checking to see if the java compiler works... yes Using JAVAC=/usr/local/openjdk7/bin/javac Java found in /usr/local/openjdk7 checking type of jvm... jdk checking java API version... 1.6 Using the following JNI include flags -I/usr/local/openjdk7/include -I/usr/local/openjdk7/include/freebsd checking if jni.h can be included... yes Looking for JNI libs with i386 as machine hardware name Looking for /usr/local/openjdk7/jre/lib/i386/libjava.so Found /usr/local/openjdk7/jre/lib/i386/libjava.so Using the following JNI library flags -L/usr/local/openjdk7/jre/lib/i386 -ljava -lverify -L/usr/local/openjdk7/jre/lib/i386/client -ljvm -L/usr/local/openjdk7/jre/lib/i386/native_threads -lhpi Using the following runtime library path /usr/local/openjdk7/jre/lib/i386:/usr/local/openjdk7/jre/lib/i386/client:/usr/local/openjdk7/jre/lib/i386/native_threads checking to see if we can link a JNI application... no configure: error: could not link file that includes jni.h Either the configure script does not know how to deal with this JVM configuration or the JVM install is broken or corrupted. ===> Script "configure" failed unexpectedly. Please report the problem to makc@FreeBSD.org [maintainer] and attach the "/wrkdirs/usr/ports/math/scilab/work/scilab-5.3.3/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** [do-configure] Error code 1 Stop in /usr/ports/math/scilab. ===> Cleaning for scilab-5.3.3_9
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