From owner-freebsd-ports-bugs@freebsd.org Fri Jul 29 16:12:36 2016 Return-Path: Delivered-To: freebsd-ports-bugs@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 5027ABA8F18 for ; Fri, 29 Jul 2016 16:12:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 3F4EF1F5B for ; Fri, 29 Jul 2016 16:12:36 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from bugs.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id u6TGCa7H068436 for ; Fri, 29 Jul 2016 16:12:36 GMT (envelope-from bugzilla-noreply@freebsd.org) From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 210168] [patch] math/gsl: update to 2.1 Date: Fri, 29 Jul 2016 16:12:36 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: changed X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: patch X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: rhurlin@gwdg.de X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: freebsd-ports-bugs@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: cc attachments.created Message-ID: In-Reply-To: References: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.22 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 29 Jul 2016 16:12:36 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D210168 Rainer Hurling changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |rhurlin@gwdg.de --- Comment #4 from Rainer Hurling --- Created attachment 173099 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D173099&action= =3Dedit patch to update math/gsl, rev. 2 I tried your patch with some minor modifications on 12-CURRENT amd64 and it builds and installs fine. 'portlint -AC' also is fine. (The changes in the newer patch, rev. 2, against the older one are an obsol= ete patch under files, a style problem with COMMENT and a bit better sorting in pkg-plist.) Next, I tried 44 known dependencies with GSL 2.1 on Poudriere and only 8 stopped with errors [EE]. A append a list with all ports. They are marked [= OK], if they build, ohterwise [EE], if errors occurred. The reasons for not buil= ding are from Poudriere log files: [OK] audio/snd [OK] benchmarks/flowgrind [OK] benchmarks/sipp [OK] biology/bcftools [OK] comms/gnuradio [OK] editors/calligra [EE]!!! graphics/amide tb_profile.c:671:33: error: no member named 'J' in 'gsl_multifit_fdfsolver' gsl_multifit_covar (solver->J, 0.0, covar); [OK] graphics/enblend [OK] graphics/inkscape [EE]!!! science/kst2 no newer version, no deps src/plugins/fits/lorentzian_unweighted/../non_linear.h:180:40: error:=20 no member named 'J' in 'gsl_multifit_fdfsolver' gsl_multifit_covar( pSolver->J, 0.0, pMatrixCovariance ); [OK] graphics/luminance [OK] graphics/luminance-qt5 [OK] graphics/nip2 [OK] graphics/ocropus [OK] graphics/pfstmo [OK] graphics/qgis [OK] graphics/xaos [OK] lang/algol68g [OK] lang/newlisp [OK] lang/newlisp-devel [OK] mail/bogofilter [OK] math/asymptote [OK] math/dieharder [OK] math/fflas-ffpack [OK] math/giacxcas [OK] math/labplot [OK] math/libflame [OK] math/libproj4 [EE]!!! math/ocamlgsl NEW RELEASE 1.19.1 [OK] math/octave-forge-gsl [EE]!!! math/orpie deps on math/ocamgsl [EE]!!! math/p5-Math-GSL xs/BSpline_wrap.1.16.c:3277:62: error: too many arguments to function call, expected 4, have 5 result =3D (int)gsl_bspline_deriv_eval(arg1,arg2,arg3,arg4,arg5); [OK] math/PDL [OK] math/pspp [EE]!!! math/py-gsl NEW RELEASE 2.2.0 [EE]!!! math/qtiplot no newer version, no deps src/analysis/Fit.cpp:131:29: error: no member named 'J' in 'gsl_multifit_fdfsolver' gsl_multifit_covar (s->J, 0.0, covar); [EE]!!! math/rubygem-rb-gsl no newer version, no deps histogram.c:1245:25: error: no member named 'J' in 'gsl_multifit_fdfsolver' gsl_multifit_covar(s->J, 0.0, covar); [OK] net/ns3 [OK] science/afni [OK] science/fisicalab [OK] science/getdp [OK] science/gnudatalanguage [OK] science/py-mlpy [OK] science/step So it seems, that math/ocamlgsl and math/py-gsl should be updated. For five= of the other failing ports we need patches, only math/orpie should build, after the update of math/ocamgsl. --=20 You are receiving this mail because: You are the assignee for the bug.=