Date: Thu, 23 Dec 2010 10:14:56 GMT From: Rob Farmer <rfarmer@predatorlabs.net> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/153400: [patch] science/hdf5-18 Update to 1.8.5 patch 1 Message-ID: <201012231014.oBNAEumB093316@red.freebsd.org> Resent-Message-ID: <201012231020.oBNAK9bC018446@freefall.freebsd.org>
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>Number: 153400 >Category: ports >Synopsis: [patch] science/hdf5-18 Update to 1.8.5 patch 1 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: update >Submitter-Id: current-users >Arrival-Date: Thu Dec 23 10:20:09 UTC 2010 >Closed-Date: >Last-Modified: >Originator: Rob Farmer >Release: 9.0-CURRENT >Organization: >Environment: FreeBSD thinkpad.predatorlabs.net 9.0-CURRENT FreeBSD 9.0-CURRENT #0 r216634M: Tue Dec 21 20:13:42 PST 2010 rfarmer@thinkpad.predatorlabs.net:/usr/obj/usr/src/sys/THINKPAD amd64 >Description: -Update to 1.8.5 patch 1 -Fix fetch -Make --disable-debug conditional Note: perhaps the PORTVERSION should include the patch level? But it hasn't in the past so I left it out. >How-To-Repeat: >Fix: Patch attached with submission follows: Index: Makefile =================================================================== RCS file: /home/ncvs/ports/science/hdf5-18/Makefile,v retrieving revision 1.58 diff -u -r1.58 Makefile --- Makefile 4 May 2010 17:50:41 -0000 1.58 +++ Makefile 23 Dec 2010 06:35:25 -0000 @@ -6,10 +6,10 @@ # PORTNAME= hdf5 -PORTVERSION= 1.8.4 +PORTVERSION= 1.8.5 CATEGORIES= science archivers graphics MASTER_SITES= ftp://ftp.hdfgroup.org/HDF5/current/src/ \ - ftp://ftp.hdfgroup.org/HDF5/prev-releases/hdf5-1.8.4/src/ + ftp://ftp.hdfgroup.org/HDF5/prev-releases/${PORTNAME}-${PORTVERSION}-patch1/src/ DISTNAME= ${PORTNAME}-${PORTVERSION}-patch1 MAINTAINER= koziol@hdfgroup.org @@ -21,10 +21,8 @@ USE_BZIP2= yes USE_LDCONFIG= yes GNU_CONFIGURE= yes -CONFIGURE_ARGS= --disable-debug \ - --enable-cxx \ +CONFIGURE_ARGS= --enable-cxx \ --enable-instrument \ - --enable-production \ --enable-strict-format-checks \ --with-pthread=/usr \ --with-zlib=/usr @@ -34,6 +32,12 @@ .include <bsd.port.pre.mk> +.if !defined(WITH_DEBUG) +CONFIGURE_ARGS+= --disable-debug +.else +CONFIGURE_ARGS+= --enable-production +.endif + .if defined(WITH_FORTRAN) USE_FORTRAN= yes CONFIGURE_ENV+= F9X=${FC} @@ -55,6 +59,8 @@ post-patch: @${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}|g' ${WRKSRC}/configure @${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags + @${REINPLACE_CMD} -e 's|perform examples|perform|' ${WRKSRC}/Makefile.in + @${REINPLACE_CMD} -e 's|install-recursive install-examples|install-recursive|' ${WRKSRC}/Makefile.in post-install: .if !defined(NOPORTEXAMPLES) Index: distinfo =================================================================== RCS file: /home/ncvs/ports/science/hdf5-18/distinfo,v retrieving revision 1.22 diff -u -r1.22 distinfo --- distinfo 4 May 2010 17:50:41 -0000 1.22 +++ distinfo 23 Dec 2010 01:52:30 -0000 @@ -1,3 +1,2 @@ -MD5 (hdf5-1.8.4-patch1.tar.bz2) = b19f4dfbf654a2af3653c492fc1c7513 -SHA256 (hdf5-1.8.4-patch1.tar.bz2) = 818b9f7ff767e9760d0c8aa0abc16ad20e616cfaab760dd3b18ead67326a3f18 -SIZE (hdf5-1.8.4-patch1.tar.bz2) = 5251124 +SHA256 (hdf5-1.8.5-patch1.tar.bz2) = 1028be671e24dcd9826d3eabe6c0ebe674282368689dcf0f6bb5926bc8d3be25 +SIZE (hdf5-1.8.5-patch1.tar.bz2) = 5413471 Index: pkg-plist =================================================================== RCS file: /home/ncvs/ports/science/hdf5-18/pkg-plist,v retrieving revision 1.26 diff -u -r1.26 pkg-plist --- pkg-plist 4 May 2010 18:19:52 -0000 1.26 +++ pkg-plist 23 Dec 2010 03:48:24 -0000 @@ -1,11 +1,8 @@ -bin/h5mkgrp -bin/h5copy -bin/h5stat -bin/h5perf_serial bin/gif2h5 bin/h52gif bin/h5c++ bin/h5cc +bin/h5copy bin/h5debug bin/h5diff bin/h5dump @@ -13,11 +10,13 @@ bin/h5import bin/h5jam bin/h5ls +bin/h5mkgrp +bin/h5perf_serial bin/h5redeploy bin/h5repack bin/h5repart +bin/h5stat bin/h5unjam -include/hdf5_hl.h include/H5ACpublic.h include/H5AbstractDs.h include/H5Apublic.h @@ -30,12 +29,12 @@ include/H5Cpp.h include/H5CppDoc.h include/H5Cpublic.h +include/H5DSpublic.h include/H5DataSet.h include/H5DataSpace.h include/H5DataType.h include/H5DcreatProp.h include/H5Dpublic.h -include/H5DSpublic.h include/H5DxferProp.h include/H5EnumType.h include/H5Epubgen.h @@ -59,13 +58,13 @@ include/H5Fpublic.h include/H5Gpublic.h include/H5Group.h -include/H5IdComponent.h include/H5IMpublic.h +include/H5IdComponent.h include/H5Include.h include/H5IntType.h include/H5Ipublic.h -include/H5Library.h include/H5LTpublic.h +include/H5Library.h include/H5Lpublic.h include/H5MMpublic.h include/H5Object.h @@ -83,45 +82,35 @@ include/H5VarLenType.h include/H5Zpublic.h include/H5api_adpt.h +%%FORTRAN%%include/H5f90i.h +%%FORTRAN%%include/H5f90i_gen.h include/H5overflow.h include/H5pubconf.h include/H5public.h include/H5version.h -include/hdf5.h +%%FORTRAN%%include/h5_dble_interface.mod %%FORTRAN%%include/h5a.mod %%FORTRAN%%include/h5d.mod %%FORTRAN%%include/h5e.mod %%FORTRAN%%include/h5f.mod -%%FORTRAN%%include/h5fortran_flags.mod %%FORTRAN%%include/h5fortran_types.mod %%FORTRAN%%include/h5g.mod %%FORTRAN%%include/h5global.mod %%FORTRAN%%include/h5i.mod +%%FORTRAN%%include/h5im.mod +%%FORTRAN%%include/h5l.mod %%FORTRAN%%include/h5lib.mod +%%FORTRAN%%include/h5lt.mod +%%FORTRAN%%include/h5o.mod %%FORTRAN%%include/h5p.mod %%FORTRAN%%include/h5r.mod %%FORTRAN%%include/h5s.mod %%FORTRAN%%include/h5t.mod +%%FORTRAN%%include/h5tb.mod %%FORTRAN%%include/h5z.mod +include/hdf5.h %%FORTRAN%%include/hdf5.mod -%%FORTRAN%%include/h5_dble_interface.mod -%%FORTRAN%%include/h5o.mod -%%FORTRAN%%include/h5l.mod -%%FORTRAN%%include/h5tb.mod -%%FORTRAN%%include/h5lt.mod -%%FORTRAN%%include/h5im.mod -%%FORTRAN%%lib/libhdf5_fortran.so -%%FORTRAN%%lib/libhdf5_fortran.so.0 -%%FORTRAN%%lib/libhdf5hl_fortran.so -%%FORTRAN%%lib/libhdf5hl_fortran.so.0 -%%FORTRAN%%lib/libhdf5hl_fortran.la -%%FORTRAN%%lib/libhdf5hl_fortran.a -lib/libhdf5_cpp.so -lib/libhdf5_cpp.so.6 -lib/libhdf5_hl_cpp.so -lib/libhdf5_hl_cpp.so.6 -lib/libhdf5_hl_cpp.la -lib/libhdf5_hl_cpp.a +include/hdf5_hl.h lib/libhdf5.a lib/libhdf5.la lib/libhdf5.settings @@ -129,13 +118,26 @@ lib/libhdf5.so.6 lib/libhdf5_cpp.a lib/libhdf5_cpp.la +lib/libhdf5_cpp.so +lib/libhdf5_cpp.so.6 %%FORTRAN%%lib/libhdf5_fortran.a %%FORTRAN%%lib/libhdf5_fortran.la +%%FORTRAN%%lib/libhdf5_fortran.so +%%FORTRAN%%lib/libhdf5_fortran.so.6 lib/libhdf5_hl.a lib/libhdf5_hl.la lib/libhdf5_hl.so lib/libhdf5_hl.so.6 +lib/libhdf5_hl_cpp.a +lib/libhdf5_hl_cpp.la +lib/libhdf5_hl_cpp.so +lib/libhdf5_hl_cpp.so.6 +%%FORTRAN%%lib/libhdf5hl_fortran.a +%%FORTRAN%%lib/libhdf5hl_fortran.la +%%FORTRAN%%lib/libhdf5hl_fortran.so +%%FORTRAN%%lib/libhdf5hl_fortran.so.6 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/Attributes.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/CMakeLists.txt %%PORTEXAMPLES%%%%EXAMPLESDIR%%/Makefile %%PORTEXAMPLES%%%%EXAMPLESDIR%%/Makefile.am %%PORTEXAMPLES%%%%EXAMPLESDIR%%/Makefile.in @@ -157,6 +159,9 @@ %%PORTEXAMPLES%%%%EXAMPLESDIR%%/h5_shared_mesg.c %%PORTEXAMPLES%%%%EXAMPLESDIR%%/h5_write.c %%PORTEXAMPLES%%%%EXAMPLESDIR%%/ph5example.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/run-all-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/run-c-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/run-c-ex.sh.in %%PORTEXAMPLES%%%%EXAMPLESDIR%%/testh5cc.sh %%PORTEXAMPLES%%%%EXAMPLESDIR%%/testh5cc.sh.in %%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%% >Release-Note: >Audit-Trail: >Unformatted:
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