Date: Wed, 5 Mar 2014 11:34:10 GMT From: pkg-fallout-builder@FreeBSD.org To: danilo@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [REL - 91amd64-default][net/openmpi] Failed for openmpi-1.6.5_2 in build Message-ID: <201403051134.s25BYAfo067013@beefy2.isc.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: danilo@FreeBSD.org Last committer: tijl@FreeBSD.org Ident: $FreeBSD: head/net/openmpi/Makefile 344614 2014-02-16 17:15:31Z tijl $ Log URL: http://beefy2.isc.freebsd.org/bulk/91amd64-default/2014-03-05_09h55m32s/logs/openmpi-1.6.5_2.log Build URL: http://beefy2.isc.freebsd.org/bulk/91amd64-default/2014-03-05_09h55m32s Log: ====>> Building net/openmpi build started at Wed Mar 5 11:31:59 UTC 2014 port directory: /usr/ports/net/openmpi building for: FreeBSD 91amd64-default-job-15 9.1-RELEASE-p10 FreeBSD 9.1-RELEASE-p10 amd64 maintained by: danilo@FreeBSD.org Makefile ident: $FreeBSD: head/net/openmpi/Makefile 344614 2014-02-16 17:15:31Z tijl $ Poudriere version: 3.1-pre ---Begin Environment--- OSVERSION=901000 UNAME_v=FreeBSD 9.1-RELEASE-p10 UNAME_r=9.1-RELEASE-p10 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 MASTERMNT=/usr/local/poudriere/data/build/91amd64-default/ref PKG_EXT=txz tpid=75279 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNG=1 PKGNAME=openmpi-1.6.5_2 PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f PKG_ADD=/usr/local/sbin/pkg-static add PWD=/root MASTERNAME=91amd64-default USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes PKG_VERSION=/poudriere/pkg-static version PKG_BIN=/usr/local/sbin/pkg-static ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for openmpi-1.6.5_2: IPV6=on: IPv6 protocol support SLURM=off: Enable SLURM support TORQUE=off: Enable Torque support VT=off: Enable VampirTrace support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --prefix=/usr/local/mpi/openmpi --mandir=/usr/local/mpi/openmpi/man --program-prefix= --with-hwloc=/usr/local --with-libltdl=/usr/local --enable-ipv6 --without-slurm --without-tm --enable-contrib-no-build=vt --disable-vt --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- TMPDIR="/tmp" F77="gfortran46" FC="gfortran46" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc46" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc46" MAKE=gmake PKG_CONFIG=pkgconf TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- TMPDIR="/tmp" F77="gfortran46" FC="gfortran46" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc46" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc46" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc46 -L/usr/local/lib/gcc46 -B/usr/local/bin" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local/mpi/openmpi" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="insta ll -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/openmpi DOCSDIR=/usr/local/share/doc/openmpi EXAMPLESDIR=/usr/local/share/examples/openmpi WWWDIR=/usr/local/www/openmpi ETCDIR=/usr/local/etc/openmpi --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes NO_RESTRICTED=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ===> Cleaning for openmpi-1.6.5_2 =======================<phase: check-config >============================ =========================================================================== =======================<phase: pkg-depends >============================ ===> openmpi-1.6.5_2 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.2.6.txz Installing pkg-1.2.6... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of openmpi-1.6.5_2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> Fetching all distfiles required by openmpi-1.6.5_2 for building =========================================================================== =======================<phase: checksum >============================ ===> Fetching all distfiles required by openmpi-1.6.5_2 for building => SHA256 Checksum OK for openmpi-1.6.5.tar.bz2. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> Fetching all distfiles required by openmpi-1.6.5_2 for building ===> Extracting for openmpi-1.6.5_2 => SHA256 Checksum OK for openmpi-1.6.5.tar.bz2. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for openmpi-1.6.5_2 =========================================================================== =======================<phase: build-depends >============================ ===> openmpi-1.6.5_2 depends on executable: gfortran46 - not found ===> Verifying install for gfortran46 in /usr/ports/lang/gcc ===> Installing existing package /packages/All/gcc-4.6.4.txz Installing gcc-4.6.4...Installing binutils-2.24...Installing gettext-0.18.3.1...Installing libiconv-1.14_2... done done done Installing gcc-ecj-4.5... done Installing gmp-5.1.3_1... done Installing mpc-1.0.2...Installing mpfr-3.1.2_1... done done done ===> Returning to build of openmpi-1.6.5_2 ===> openmpi-1.6.5_2 depends on executable: gmake - not found ===> Verifying install for gmake in /usr/ports/devel/gmake ===> Installing existing package /packages/All/gmake-3.82_1.txz Installing gmake-3.82_1... done ===> Returning to build of openmpi-1.6.5_2 ===> openmpi-1.6.5_2 depends on executable: pkgconf - not found ===> Verifying install for pkgconf in /usr/ports/devel/pkgconf ===> Installing existing package /packages/All/pkgconf-0.9.4.txz Installing pkgconf-0.9.4... done ===> Returning to build of openmpi-1.6.5_2 ===> openmpi-1.6.5_2 depends on file: /usr/local/bin/as - found =========================================================================== =======================<phase: lib-depends >============================ ===> openmpi-1.6.5_2 depends on shared library: libexecinfo.so - not found ===> Verifying for libexecinfo.so in /usr/ports/devel/libexecinfo ===> Installing existing package /packages/All/libexecinfo-1.1_3.txz Installing libexecinfo-1.1_3... done ===> Returning to build of openmpi-1.6.5_2 ===> openmpi-1.6.5_2 depends on shared library: libhwloc.so - not found ===> Verifying for libhwloc.so in /usr/ports/devel/hwloc ===> Installing existing package /packages/All/hwloc-1.8.txz Installing hwloc-1.8...Installing libpciaccess-0.13.2...Installing pciids-20140222... done done Installing libxml2-2.8.0_3... done done ===> Returning to build of openmpi-1.6.5_2 ===> openmpi-1.6.5_2 depends on shared library: libltdl.so - not found ===> Verifying for libltdl.so in /usr/ports/devel/libltdl ===> Installing existing package /packages/All/libltdl-2.4.2_2.txz Installing libltdl-2.4.2_2... done ===> Returning to build of openmpi-1.6.5_2 =========================================================================== =======================<phase: configure >============================ ===> Configuring for openmpi-1.6.5_2 ============================================================================ == Configuring Open MPI ============================================================================ *** Startup tests checking build system type... x86_64-unknown-freebsd9.1 checking host system type... x86_64-unknown-freebsd9.1 checking target system type... x86_64-unknown-freebsd9.1 checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel checking whether build environment is sane... yes checking for a thread-safe mkdir -p... config/install-sh -c -d checking for gawk... no checking for mawk... no <snip> CC trace.lo CC fd.lo CCLD libopalutil.la gmake[3]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/util' gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/util' Making all in mca/base gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/base' CC mca_base_close.lo CC mca_base_cmd_line.lo CC mca_base_component_compare.lo CC mca_base_component_find.lo CC mca_base_component_repository.lo CC mca_base_components_open.lo CC mca_base_components_close.lo CC mca_base_components_select.lo CC mca_base_list.lo CC mca_base_open.lo CC mca_base_param.lo CC mca_base_parse_paramfile.lo CCLD libmca_base.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/base' Making all in mca/backtrace gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/backtrace' CC base/backtrace_component.lo CCLD libmca_backtrace.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/backtrace' Making all in mca/carto gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/carto' CC base/carto_base_close.lo CC base/carto_base_select.lo CC base/carto_base_graph.lo CC base/carto_base_wrapers.lo CC base/carto_base_open.lo CCLD libmca_carto.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/carto' Making all in mca/crs gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/crs' CC base/crs_base_open.lo CC base/crs_base_close.lo CC base/crs_base_select.lo CC base/crs_base_fns.lo CCLD libmca_crs.la Creating opal_crs.7 man page... gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/crs' Making all in mca/hwloc gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/hwloc' CC base/hwloc_base_close.lo CC base/hwloc_base_open.lo CC base/hwloc_base_dt.lo CC base/hwloc_base_util.lo CC base/hwloc_base_proc_mempolicy.lo CCLD libmca_hwloc.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/hwloc' Making all in mca/installdirs gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs' CC base/installdirs_base_components.lo CC base/installdirs_base_expand.lo CCLD libmca_installdirs.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs' Making all in mca/maffinity gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/maffinity' CC base/maffinity_base_close.lo CC base/maffinity_base_select.lo CC base/maffinity_base_open.lo CC base/maffinity_base_wrappers.lo CCLD libmca_maffinity.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/maffinity' Making all in mca/memchecker gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memchecker' CC base/memchecker_base_close.lo CC base/memchecker_base_open.lo CC base/memchecker_base_select.lo CC base/memchecker_base_wrappers.lo CCLD libmca_memchecker.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memchecker' Making all in mca/memcpy gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memcpy' CC base/memcpy_base_close.lo CC base/memcpy_base_open.lo CCLD libmca_memcpy.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memcpy' Making all in mca/memory gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memory' CC base/memory_base_close.lo CC base/memory_base_open.lo CC base/memory_base_empty.lo CCLD libmca_memory.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/memory' Making all in mca/paffinity gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/paffinity' CC base/paffinity_base_close.lo CC base/paffinity_base_select.lo CC base/paffinity_base_open.lo CC base/paffinity_base_wrappers.lo CC base/paffinity_base_service.lo CCLD libmca_paffinity.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/paffinity' Making all in mca/pstat gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/pstat' CC base/pstat_base_close.lo CC base/pstat_base_select.lo CC base/pstat_base_open.lo CCLD libmca_pstat.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/pstat' Making all in mca/shmem gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/shmem' CC base/shmem_base_close.lo CC base/shmem_base_select.lo CC base/shmem_base_open.lo CC base/shmem_base_wrappers.lo CCLD libmca_shmem.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/shmem' Making all in mca/sysinfo gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/sysinfo' CC base/sysinfo_base_close.lo CC base/sysinfo_base_select.lo CC base/sysinfo_base_open.lo CCLD libmca_sysinfo.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/sysinfo' Making all in mca/timer gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/timer' CC base/timer_base_close.lo CC base/timer_base_open.lo CCLD libmca_timer.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/timer' Making all in mca/backtrace/execinfo gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/backtrace/execinfo' CC backtrace_execinfo.lo backtrace_execinfo.c: In function 'opal_backtrace_print': backtrace_execinfo.c:39: warning: assignment makes pointer from integer without a cast backtrace_execinfo.c: In function 'opal_backtrace_buffer': backtrace_execinfo.c:58: warning: assignment makes pointer from integer without a cast CC backtrace_execinfo_component.lo CCLD libmca_backtrace_execinfo.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/backtrace/execinfo' Making all in mca/hwloc/external gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/hwloc/external' CC hwloc_external_component.lo CCLD libmca_hwloc_external.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/hwloc/external' Making all in mca/installdirs/env gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs/env' CC opal_installdirs_env.lo CCLD libmca_installdirs_env.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs/env' Making all in mca/installdirs/config gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs/config' CC opal_installdirs_config.lo CCLD libmca_installdirs_config.la gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal/mca/installdirs/config' Making all in . gmake[2]: Entering directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal' CC class/opal_bitmap.lo CC class/opal_free_list.lo CC class/opal_hash_table.lo CC class/opal_list.lo CC class/opal_object.lo CC class/opal_graph.lo CC class/opal_atomic_lifo.lo CC class/opal_pointer_array.lo CC class/opal_value_array.lo CC class/opal_ring_buffer.lo CC memoryhooks/memory.lo CC runtime/opal_progress.lo CC runtime/opal_finalize.lo CC runtime/opal_init.lo CC runtime/opal_params.lo CC runtime/opal_cr.lo CC threads/condition.lo CC threads/mutex.lo CC threads/thread.lo CC threads/tsd.lo CC dss/dss_internal_functions.lo CC dss/dss_compare.lo CC dss/dss_copy.lo CC dss/dss_dump.lo CC dss/dss_get.lo CC dss/dss_load_unload.lo CC dss/dss_lookup.lo CC dss/dss_pack.lo CC dss/dss_peek.lo CC dss/dss_print.lo CC dss/dss_register.lo CC dss/dss_release.lo CC dss/dss_set.lo CC dss/dss_set_buffer_type.lo CC dss/dss_size.lo CC dss/dss_unpack.lo CC dss/dss_open_close.lo CCLD libopen-pal.la /usr/bin/ld: cannot find -lhwloc gmake[2]: *** [libopen-pal.la] Error 1 gmake[2]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal' gmake[1]: *** [all-recursive] Error 1 gmake[1]: Leaving directory `/wrkdirs/usr/ports/net/openmpi/work/openmpi-1.6.5/opal' gmake: *** [all-recursive] Error 1 *** [do-build] Error code 1 Stop in /usr/ports/net/openmpi. ===> Cleaning for openmpi-1.6.5_2
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