Date: Mon, 18 Mar 2013 23:35:02 +0000 (UTC) From: Jason Helfman <jgh@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r314609 - head/biology/embassy Message-ID: <201303182335.r2INZ2IN042610@svn.freebsd.org>
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Author: jgh Date: Mon Mar 18 23:35:01 2013 New Revision: 314609 URL: http://svnweb.freebsd.org/changeset/ports/314609 Log: - adopt optionsNG - trim historical header - tighten COMMENT Approved by: portmgr (miwi) Modified: head/biology/embassy/Makefile Modified: head/biology/embassy/Makefile ============================================================================== --- head/biology/embassy/Makefile Mon Mar 18 22:20:39 2013 (r314608) +++ head/biology/embassy/Makefile Mon Mar 18 23:35:01 2013 (r314609) @@ -9,7 +9,7 @@ MASTER_SITES= ftp://emboss.open-bio.org/ DIST_SUBDIR= emboss MAINTAINER= wen@FreeBSD.org -COMMENT= A collection of contributed EMBOSS applications +COMMENT= Collection of contributed EMBOSS applications LIB_DEPENDS= nucleus.6:${PORTSDIR}/biology/emboss @@ -23,23 +23,31 @@ USE_XORG= x11 USE_MOTIF= yes USE_LDCONFIG= yes -OPTIONS= DOMAINATRIX "Protein domain apps" on \ - DOMALIGN "Protein domain apps" on \ - DOMSEARCH "Protein domain apps" on \ - SIGNATURE "Protein domain apps" on \ - STRUCTURE "Protein domain apps" on \ - EMNU "EMBOSS simple menu" on \ - ESIM4 "Align cDNA/EST to genome" on \ - HMMER "HMM alignment and searches" on \ - MEMENEW "Motif detection" on \ - MSE "A multiple sequence screen editor" on \ - MYEMBOSS "Examples for developers of EMBOSS apps" on \ - PHYLIPNEW "Phylogeny inference" on \ - TOPO "Transmembrane display" on \ - VIENNA "RNA folding" on \ - MIRA "Whole Genome shotgun and EST assembler" on \ - IPRSCAN "InterPro scan" on \ - CBSTOOLS "CBS Tools" on +OPTIONS_DEFINE= DOMAINATRIX DOMALIGN DOMSEARCH SIGNATURE STRUCTURE \ + EMNU ESIM4 HMMER MEMENEW MSE MYEMBOSS PHYLIPNEW TOPO \ + VIENNA MIRA IPRSCAN CBSTOOLS + +DOMAINATRIX_DESC= Protein domain apps +DOMALIGN_DESC= Protein domain apps +DOMSEARCH_DESC= Protein domain apps +SIGNATURE_DESC= Protein domain apps +STRUCTURE_DESC= Protein domain apps +EMNU_DESC= EMBOSS simple menu +ESIM4_DESC= Align cDNA/EST to genome +HMMER_DESC= HMM alignment and searches +MEMENEW_DESC= Motif detection +MSE_DESC= A multiple sequence screen editor +MYEMBOSS_DESC= Examples for developers of EMBOSS apps +PHYLIPNEW_DESC= Phylogeny inference +TOPO_DESC= Transmembrane display +VIENNA_DESC= RNA folding +MIRA_DESC= Whole Genome shotgun and EST assembler +IPRSCAN_DESC= InterPro scan +CBSTOOLS_DESC= CBS Tools + +OPTIONS_DEFAULT= DOMAINATRIX DOMALIGN DOMSEARCH SIGNATURE STRUCTURE \ + EMNU ESIM4 HMMER MEMENEW MSE MYEMBOSS PHYLIPNEW TOPO \ + VIENNA MIRA IPRSCAN CBSTOOLS CPPFLAGS+= -I${PREFIX}/include -I${LOCALBASE}/include -I${LOCALBASE}/emboss/include LDFLAGS+= -L${PREFIX}/lib -L${LOCALBASE}/lib -L${LOCALBASE}/emboss/lib @@ -69,9 +77,10 @@ EMBASSY_APPS= DOMAINATRIX EMNU ESIM4 HM VIENNA MIRA IPRSCAN CBSTOOLS .include <bsd.port.pre.mk> +.include <bsd.port.options.mk> .for app in ${EMBASSY_APPS} -.if !defined(WITHOUT_${app}) +.if ${PORT_OPTIONS:M${app}} APPLIST+= ${app} ${app}_WRKSRC= ${EMBASSY_WRKDIR}/${app}-${${app}_VERSION} ${app}_DISTFILE=${app}-${${app}_VERSION}${EXTRACT_SUFX}
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