Date: Sun, 15 Mar 2009 13:44:32 GMT From: Wen heping <wenheping@gmail.com> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/132659: [Maintainer Update]biology/p5-Bio-Graphics:update to 1.90 Message-ID: <200903151344.n2FDiWDE013346@www.freebsd.org> Resent-Message-ID: <200903151350.n2FDo02b054350@freefall.freebsd.org>
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>Number: 132659 >Category: ports >Synopsis: [Maintainer Update]biology/p5-Bio-Graphics:update to 1.90 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Sun Mar 15 13:50:00 UTC 2009 >Closed-Date: >Last-Modified: >Originator: Wen heping >Release: FreeBSD 8.0-CURRENT >Organization: ChangAn Middle School >Environment: FreeBSD fb8.wenjing.com 8.0-CURRENT-200811 FreeBSD 8.0-CURRENT-200811 #0: Thu Nov 6 00:32:12 UTC 2008 root@almeida.cse.buffalo.edu:/usr/obj/usr/src/sys/GENERIC i386 >Description: 1 update to 1.90 from 1.84 2 it require: http://www.freebsd.org/cgi/query-pr.cgi?pr=132657 http://www.freebsd.org/cgi/query-pr.cgi?pr=132656 >How-To-Repeat: >Fix: Patch attached with submission follows: --- Makefile.orig 2009-03-15 12:59:05.000000000 +0800 +++ Makefile 2009-03-15 20:47:23.000000000 +0800 @@ -6,7 +6,7 @@ # PORTNAME= Bio-Graphics -PORTVERSION= 1.84 +PORTVERSION= 1.90 CATEGORIES= biology perl5 MASTER_SITES= CPAN PKGNAMEPREFIX= p5- @@ -15,9 +15,10 @@ COMMENT= Generate GD Images of Bio::Seq Objects BUILD_DEPENDS= p5-GD>=2.3:${PORTSDIR}/graphics/p5-GD \ - p5-GD-SVG>=0:${PORTSDIR}/graphics/p5-GD-SVG \ + p5-GD-SVG>=0.32:${PORTSDIR}/graphics/p5-GD-SVG \ + p5-Statistics-Descriptive>=2.6:${PORTSDIR}/math/p5-Statistics-Descriptive \ p5-bioperl>=1.6.0:${PORTSDIR}/biology/p5-bioperl \ - p5-Text-ParseWords>=0:${PORTSDIR}/textproc/p5-Text-ParseWords \ + p5-Text-ParseWords>=3.26:${PORTSDIR}/textproc/p5-Text-ParseWords \ p5-ExtUtils-MakeMaker>=0:${PORTSDIR}/devel/p5-ExtUtils-MakeMaker RUN_DEPENDS= ${BUILD_DEPENDS} @@ -62,6 +63,7 @@ Bio::Graphics::Glyph::heat_map.3 \ Bio::Graphics::Glyph::heat_map_ideogram.3 \ Bio::Graphics::Glyph::heterogeneous_segments.3 \ + Bio::Graphics::Glyph::hybrid_plot.3 \ Bio::Graphics::Glyph::ideogram.3 \ Bio::Graphics::Glyph::image.3 \ Bio::Graphics::Glyph::lightning.3 \ --- distinfo.orig 2009-03-15 12:59:05.000000000 +0800 +++ distinfo 2009-03-15 19:25:35.000000000 +0800 @@ -1,3 +1,3 @@ -MD5 (Bio-Graphics-1.84.tar.gz) = ff4e72484d345d5d711b80606426faff -SHA256 (Bio-Graphics-1.84.tar.gz) = f255268a98fee1bdc8a4e5be4802ff3fd7e1c47c6a6eb76c9ec651425b9e6caa -SIZE (Bio-Graphics-1.84.tar.gz) = 553114 +MD5 (Bio-Graphics-1.90.tar.gz) = 2045021e033b6ac9408478c0e45f3eda +SHA256 (Bio-Graphics-1.90.tar.gz) = 3db374f1af646d0c9a39570fda4113319810fddd9d04027489d273aa34308517 +SIZE (Bio-Graphics-1.90.tar.gz) = 559552 --- pkg-plist.orig 2009-03-15 12:59:05.000000000 +0800 +++ pkg-plist 2009-03-15 12:59:05.000000000 +0800 @@ -8,6 +8,7 @@ %%SITE_PERL%%/Bio/Graphics/Glyph/spectrogram.pm %%SITE_PERL%%/Bio/Graphics/Glyph/ideogram.pm %%SITE_PERL%%/Bio/Graphics/Glyph/heat_map.pm +%%SITE_PERL%%/Bio/Graphics/Glyph/hybrid_plot.pm %%SITE_PERL%%/Bio/Graphics/Glyph/smoothing.pm %%SITE_PERL%%/Bio/Graphics/Glyph/stackedplot.pm %%SITE_PERL%%/Bio/Graphics/Glyph/trace.pm >Release-Note: >Audit-Trail: >Unformatted:
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