From nobody Sat Jun 15 06:03:11 2024 X-Original-To: ports-bugs@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4W1QYX6NW2z5NNps for ; Sat, 15 Jun 2024 06:03:12 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4W1QYX1YwHz4SBL for ; Sat, 15 Jun 2024 06:03:12 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1718431392; a=rsa-sha256; cv=none; b=ijpz8KikeyEXBu9JzfYb3BJVRmoIzVsLRKcP23sip33dX5o2yEcsrGm+OQkeHCrYfTvBo+ M4v8C/o+RNpq5gxbrhDzk9TxIkBs3onS6EQphrUVEbFCxWPlkKNBSZ83lbT7I/vmn87ddh 3+6M3B9inVvkl80OTKUjNDRdTBXYb0ktt5k2vP6K8aERpwAxN/h5IanzdPjX6vOIvsnCZY vCMs9PK90yb3xjoMGSGJX7kOaxP1yZrILiu5/MQ5VIIFrZBd/VadupIdH6zi917ZkolT2D QTMcM8QaDz7EfwEcbm+2hb+lPtxYuxygnKrm5fEPW9FKMjYRDcKVMPG2PBMLfw== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1718431392; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=QzO2z2+Q/LQkQqa8YWEpa0irESwrOjWgh1jkRaPlTlU=; b=vDPCBiCtcPai7rPuEltkaXEmBRM54b0qRV/13nj75MbRlIoYxXg9iHzPeH3+OxbqnVA+pY vVOlFda/hr1GxQTR0/r3enNhLgvucqj2kcPD1ZdI3QSFb3fJpt1rgqyXb2V94FhsAJEJyU ivLEHCkd5zPP1SyZ5zpj9sCGH2pkntVGQoTt51emexvJ9mnZ8C4X76+jZ+tTKyGiOJI0j+ KYLUgjRyEIONLIhKc4Z1Eh5iF0Fk9vtirXhHA9OWcQBAUJxC5boz3Zk25FQKud30BJdcmO Oj8d5W5WQH/vavWQ/aLoMELuYf9CD3JAUs5jXkhX/X2sD5u0mXC7XKNcGNxVHA== Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2610:1c1:1:606c::50:1d]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4W1QYX19bqzsrb for ; Sat, 15 Jun 2024 06:03:12 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org ([127.0.1.5]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id 45F63CCA072530 for ; Sat, 15 Jun 2024 06:03:12 GMT (envelope-from bugzilla-noreply@freebsd.org) Received: (from www@localhost) by kenobi.freebsd.org (8.15.2/8.15.2/Submit) id 45F63CZG072524 for ports-bugs@FreeBSD.org; Sat, 15 Jun 2024 06:03:12 GMT (envelope-from bugzilla-noreply@freebsd.org) X-Authentication-Warning: kenobi.freebsd.org: www set sender to bugzilla-noreply@freebsd.org using -f From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 279752] biology/libsbml: Fix build with libxml2 2.12 and newer Date: Sat, 15 Jun 2024 06:03:11 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: diizzy@FreeBSD.org X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: sunpoet@FreeBSD.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter blocked flagtypes.name attachments.created Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated List-Id: Ports bug reports List-Archive: https://lists.freebsd.org/archives/freebsd-ports-bugs List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: freebsd-ports-bugs@freebsd.org Sender: owner-freebsd-ports-bugs@FreeBSD.org MIME-Version: 1.0 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D279752 Bug ID: 279752 Summary: biology/libsbml: Fix build with libxml2 2.12 and newer Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: sunpoet@FreeBSD.org Reporter: diizzy@FreeBSD.org Blocks: 279705 Flags: maintainer-feedback?(sunpoet@FreeBSD.org) Assignee: sunpoet@FreeBSD.org Created attachment 251466 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D251466&action= =3Dedit Patch for libsbml Backport upstream commit a3e217851f18d3c5e8e2b0082fb98176738491e8 Reference: https://github.com/sbmlteam/libsbml/commit/a3e217851f18d3c5e8e2b0082fb98176= 738491e8 Compile and runtime tested on FreeBSD 14.0-RELEASE (amd64) (make, make check-plist, make test) Poudriere testport OK 13.2-RELEASE (amd64) Poudriere testport OK 14.0-RELEASE (amd64) Additional note (unrelated), Warning: Possible REINPLACE_CMD issues: - - REINPLACE_CMD ran, but did not modify file contents: CMakeLists.txt Referenced Bugs: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D279705 [Bug 279705] textproc/libxml2: Update to 2.13.0 --=20 You are receiving this mail because: You are the assignee for the bug.=