Date: Tue, 31 Mar 2020 06:42:23 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r529953 - in head/biology/cufflinks: . files Message-ID: <202003310642.02V6gN8U060702@repo.freebsd.org>
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Author: yuri Date: Tue Mar 31 06:42:22 2020 New Revision: 529953 URL: https://svnweb.freebsd.org/changeset/ports/529953 Log: biology/cufflinks: Update 2.2.1-83 -> 2.2.1-89 Add the pull request that fixes the boost::thread build failures. Deleted: head/biology/cufflinks/files/patch-src_biascorrection.h Modified: head/biology/cufflinks/Makefile head/biology/cufflinks/distinfo Modified: head/biology/cufflinks/Makefile ============================================================================== --- head/biology/cufflinks/Makefile Tue Mar 31 06:35:49 2020 (r529952) +++ head/biology/cufflinks/Makefile Tue Mar 31 06:42:22 2020 (r529953) @@ -2,10 +2,12 @@ PORTNAME= cufflinks DISTVERSIONPREFIX= v -DISTVERSION= 2.2.1-83 -DISTVERSIONSUFFIX= -gb4fa050 -PORTREVISION= 2 +DISTVERSION= 2.2.1-89 +DISTVERSIONSUFFIX= -gdc3b0cb CATEGORIES= biology + +PATCH_SITES= https://github.com/${GH_ACCOUNT}/${PORTNAME}/commit/ +PATCHFILES+= ea4671149f3054c773d99cea521db75bf7b0658f.patch:-p1 # https://github.com/cole-trapnell-lab/cufflinks/pull/127 MAINTAINER= yuri@FreeBSD.org COMMENT= Cufflinks assembles transcripts, estimates their abundance, etc Modified: head/biology/cufflinks/distinfo ============================================================================== --- head/biology/cufflinks/distinfo Tue Mar 31 06:35:49 2020 (r529952) +++ head/biology/cufflinks/distinfo Tue Mar 31 06:42:22 2020 (r529953) @@ -1,3 +1,5 @@ -TIMESTAMP = 1558818522 -SHA256 (cole-trapnell-lab-cufflinks-v2.2.1-83-gb4fa050_GH0.tar.gz) = 0b26b02c080115d4262d466503bdc43db5ff5583d8122e77355782dc7cbe0522 -SIZE (cole-trapnell-lab-cufflinks-v2.2.1-83-gb4fa050_GH0.tar.gz) = 8804967 +TIMESTAMP = 1585636520 +SHA256 (cole-trapnell-lab-cufflinks-v2.2.1-89-gdc3b0cb_GH0.tar.gz) = 3947a7266b4f58a92b3944b8e205c8875a7c0ce9ea19b394ea82ff77b91999be +SIZE (cole-trapnell-lab-cufflinks-v2.2.1-89-gdc3b0cb_GH0.tar.gz) = 8807044 +SHA256 (ea4671149f3054c773d99cea521db75bf7b0658f.patch) = d64446bab1b683dbdb51b33992694bbbc6511aa4eacd2b95812da75e090dff47 +SIZE (ea4671149f3054c773d99cea521db75bf7b0658f.patch) = 3779
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