Date: Wed, 30 Jun 2010 16:08:03 -0700 From: David Wolfskill <david@catwhisker.org> To: FreeBSD-gnats-submit@FreeBSD.org, freebsd-ports-bugs@FreeBSD.org Subject: Re: ports/148264: math/R: Error: segfault from C stack overflow Message-ID: <20100630230803.GE90096@albert.catwhisker.org> In-Reply-To: <201006301810.o5UIA5ua053005@freefall.freebsd.org> References: <201006301756.o5UHud80039010@albert.catwhisker.org> <201006301810.o5UIA5ua053005@freefall.freebsd.org>
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--HTxS7It8wpDcI4PN Content-Type: text/plain; charset=us-ascii Content-Disposition: inline Content-Transfer-Encoding: quoted-printable I believe this update may be of interest. After applying the following patch: diff -ru R/Makefile R/Makefile --- R/Makefile 2010-05-31 05:31:45.000000000 -0700 +++ R/Makefile 2010-06-30 15:09:30.000000000 -0700 @@ -11,8 +11,7 @@ .else PORTNAME=3D R .endif -PORTVERSION=3D 2.11.0 -PORTREVISION=3D 1 +PORTVERSION=3D 2.11.1 CATEGORIES=3D math lang MASTER_SITES=3D http://cran.r-project.org/src/base/R-2/ \ ftp://cran.r-project.org/pub/R/src/base/R-2/ \ diff -ru R/distinfo R/distinfo --- R/distinfo 2010-04-27 12:51:30.000000000 -0700 +++ R/distinfo 2010-06-30 15:12:30.000000000 -0700 @@ -1,3 +1,3 @@ -MD5 (R-2.11.0.tar.gz) =3D c6c1e866299f533617750889c729bfb3 -SHA256 (R-2.11.0.tar.gz) =3D 9b2a1769cdf21ad00500cbc0a1f7e09c872681d2ca0ea= 592e7692f15ff980a43 -SIZE (R-2.11.0.tar.gz) =3D 19779908 +MD5 (R-2.11.1.tar.gz) =3D 7421108ade3e9223263394b9bbe277ce +SHA256 (R-2.11.1.tar.gz) =3D 48c1b96426f5b588763652b0b633cadccf410bae34300= c22fd40524662bc23bb +SIZE (R-2.11.1.tar.gz) =3D 19729300 and rebuilding math/R, using the just-built R 2.11.1 did, in fact, avoid the "Error: segfault from C stack overflow" condition; I was able to create all of the plots without incident. There may be other issues with 2.11.1, or there may be issues with environments other than FreeBSD/i386 stable/7; I have not tested that. But the above patch does appear to be sufficient to update the port from 2.11.0_1 to 2.11.1, and the resulting executable and associated libraries appear to work. Peace, david --=20 David H. Wolfskill david@catwhisker.org Depriving a girl or boy of an opportunity for education is evil. See http://www.catwhisker.org/~david/publickey.gpg for my public key. --HTxS7It8wpDcI4PN Content-Type: application/pgp-signature Content-Disposition: inline -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.15 (FreeBSD) iEYEARECAAYFAkwrzlMACgkQmprOCmdXAD0tigCeJFsQgMsRDAXcMojttQil8Qwx FqkAnRG+qxsBCRkUeVqnkWvcO+KaldpU =CZIY -----END PGP SIGNATURE----- --HTxS7It8wpDcI4PN--
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