Date: Tue, 15 Jun 2021 07:49:55 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 114i386-default][misc/xgboost] Failed for xgboost-1.4.1 in build Message-ID: <202106150749.15F7ntNu078721@beefy10.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy10.nyi.freebsd.org/data/114i386-default/d83453f82622/logs/xgboost-1.4.1.log Build URL: http://beefy10.nyi.freebsd.org/build.html?mastername=114i386-default&build=d83453f82622 Log: =>> Building misc/xgboost build started at Tue Jun 15 07:49:30 UTC 2021 port directory: /usr/ports/misc/xgboost package name: xgboost-1.4.1 building for: FreeBSD 114i386-default-job-05 11.4-RELEASE-p11 FreeBSD 11.4-RELEASE-p11 i386 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1400008 Jail OSVERSION: 1104001 Job Id: 05 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1104001 UNAME_v=FreeBSD 11.4-RELEASE-p11 UNAME_r=11.4-RELEASE-p11 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/114i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/114i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=114i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/114i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for xgboost-1.4.1: OPENMP=off: Parallel processing support via OpenMP ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/misc/xgboost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/xgboost/work HOME=/wrkdirs/usr/ports/misc/xgboost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/xgboost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/misc/xgboost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/xgboost/work HOME=/wrkdirs/usr/ports/misc/xgboost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/xgboost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/misc/xgboost/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" /usr/local/lib/libdmlc.so -lexecinfo -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=11.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/xgboost" EXAMPLESDIR="share/examples/xgboost" DATADIR="share/xgboost" WWWDIR="www/xgboost" ETCDIR="etc/xgboost" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/xgboost DOCSDIR=/usr/local/share/doc/xgboost EXAMPLESDIR=/usr/local/share/examples/xgboost WWWDIR=/usr/local/www/xgboost ETCDIR=/usr/local/etc/xgboost --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: i386-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: i386-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-0-gd32170dbd5b) Target: i386-unknown-freebsd11.4 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=11.4-RELEASE-p11 OSREL=11.4 OSVERSION=1104001 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License APACHE20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> xgboost-1.4.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.3.txz [114i386-default-job-05] Installing pkg-1.16.3... [114i386-default-job-05] Extracting pkg-1.16.3: .......... done ===> xgboost-1.4.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of xgboost-1.4.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.4.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.4.1 for building => SHA256 Checksum OK for dmlc-xgboost-v1.4.1_GH0.tar.gz. => SHA256 Checksum OK for NVlabs-cub-af39ee2_GH0.tar.gz. => SHA256 Checksum OK for rapidsai-gputreeshap-3310a30_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.4.1 for building ===> Extracting for xgboost-1.4.1 => SHA256 Checksum OK for dmlc-xgboost-v1.4.1_GH0.tar.gz. => SHA256 Checksum OK for NVlabs-cub-af39ee2_GH0.tar.gz. => SHA256 Checksum OK for rapidsai-gputreeshap-3310a30_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for xgboost-1.4.1 ===> Applying FreeBSD patches for xgboost-1.4.1 from /usr/ports/misc/xgboost/files =========================================================================== =======================<phase: build-depends >============================ ===> xgboost-1.4.1 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.20.3.txz [114i386-default-job-05] Installing cmake-3.20.3... [114i386-default-job-05] `-- Installing curl-7.77.0... [114i386-default-job-05] | `-- Installing ca_root_nss-3.63... [114i386-default-job-05] | `-- Extracting ca_root_nss-3.63: ........ done [114i386-default-job-05] | `-- Installing libnghttp2-1.43.0... [114i386-default-job-05] | `-- Extracting libnghttp2-1.43.0: .......... done [114i386-default-job-05] `-- Extracting curl-7.77.0: .......... done [114i386-default-job-05] `-- Installing expat-2.4.1... [114i386-default-job-05] `-- Extracting expat-2.4.1: .......... done [114i386-default-job-05] `-- Installing jsoncpp-1.9.4... [114i386-default-job-05] `-- Extracting jsoncpp-1.9.4: .......... done [114i386-default-job-05] `-- Installing libarchive-3.5.1,1... [114i386-default-job-05] | `-- Installing liblz4-1.9.3,1... [114i386-default-job-05] | `-- Extracting liblz4-1.9.3,1: .......... done [114i386-default-job-05] `-- Extracting libarchive-3.5.1,1: .......... done [114i386-default-job-05] `-- Installing libuv-1.41.0... [114i386-default-job-05] `-- Extracting libuv-1.41.0: .......... done [114i386-default-job-05] `-- Installing rhash-1.4.1... [114i386-default-job-05] | `-- Installing gettext-runtime-0.21... [114i386-default-job-05] | | `-- Installing indexinfo-0.3.1... [114i386-default-job-05] | | `-- Extracting indexinfo-0.3.1: .... done [114i386-default-job-05] | `-- Extracting gettext-runtime-0.21: .......... done [114i386-default-job-05] `-- Extracting rhash-1.4.1: .......... done [114i386-default-job-05] Extracting cmake-3.20.3: .......... done ===== Message from ca_root_nss-3.63: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> xgboost-1.4.1 depends on file: /usr/local/bin/cmake - found ===> Returning to build of xgboost-1.4.1 ===> xgboost-1.4.1 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.10.2,2.txz [114i386-default-job-05] Installing ninja-1.10.2,2... [114i386-default-job-05] `-- Installing python38-3.8.10... [114i386-default-job-05] | `-- Installing libffi-3.3_1... [114i386-default-job-05] | `-- Extracting libffi-3.3_1: .......... done [114i386-default-job-05] | `-- Installing mpdecimal-2.5.1... [114i386-default-job-05] | `-- Extracting mpdecimal-2.5.1: .......... done [114i386-default-job-05] | `-- Installing readline-8.1.1... [114i386-default-job-05] | `-- Extracting readline-8.1.1: .......... done [114i386-default-job-05] `-- Extracting python38-3.8.10: .......... done [114i386-default-job-05] Extracting ninja-1.10.2,2: ........ done ===== Message from python38-3.8.10: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py38-gdbm databases/py-gdbm@py38 py38-sqlite3 databases/py-sqlite3@py38 py38-tkinter x11-toolkits/py-tkinter@py38 ===> xgboost-1.4.1 depends on executable: ninja - found ===> Returning to build of xgboost-1.4.1 =========================================================================== =======================<phase: lib-depends >============================ ===> xgboost-1.4.1 depends on shared library: libdmlc.so - not found ===> Installing existing package /packages/All/dmlc-core-0.3.123.txz [114i386-default-job-05] Installing dmlc-core-0.3.123... [114i386-default-job-05] Extracting dmlc-core-0.3.123: .......... done ===> xgboost-1.4.1 depends on shared library: libdmlc.so - found (/usr/local/lib/libdmlc.so) ===> Returning to build of xgboost-1.4.1 =========================================================================== =======================<phase: configure >============================ ===> Configuring for xgboost-1.4.1 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/misc/xgboost/work/.build -- The CXX compiler identification is Clang 10.0.0 -- The C compiler identification is Clang 10.0.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMake version 3.20.3 -- Performing Test XGBOOST_MM_PREFETCH_PRESENT -- Performing Test XGBOOST_MM_PREFETCH_PRESENT - Success -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT - Success -- xgboost VERSION: 1.4.1 -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE -- Build files have been written to: /wrkdirs/usr/ports/misc/xgboost/work/.build =========================================================================== =======================<phase: build >============================ ===> Building for xgboost-1.4.1 [ 1% 1/61] /usr/bin/c++ -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -pthread -std=gnu++14 -MD -MT CMakeFiles/runxgboost.dir/src/cli_main.cc.o -MF CMakeFiles/runxgboost.dir/src/cli_main.cc.o.d -o CMakeFiles/runxgboost.dir/src/cli_main.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/cli_main.cc [ 3% 2/61] /usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/common/charconv.cc.o -MF src/CMakeFiles/objxgboost.dir/common/charconv.cc.o.d -o src/CMakeFiles/objxgboost.dir/common/charconv.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/common/charconv.cc [ 4% 3/61] /usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -MF src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o.d -o src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc FAILED: src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o /usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -MF src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o.d -o src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc:738:70: error: non-constant-expression cannot be narrowed from type 'xgboost::bst_ulong' (aka 'unsigned long long') to 'size_t' (aka 'unsigned int') in initializer list [-Wc++11-narrowing] StringView{indptr}, StringView{indices}, StringView{data}, cols}}; ^~~~ /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc:738:70: note: insert an explicit cast to silence this issue StringView{indptr}, StringView{indices}, StringView{data}, cols}}; ^~~~ static_cast<size_t>( ) 1 error generated. ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/misc/xgboost
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