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　北山です。

　Kuriyama さんのおかげで解決しました。

> 　最新の ports tree の subversion では neon はサポートされておらず
> serf を使う形になると思います。
> 
> % ldd /usr/local/bin/svn | egrep 'neon|serf'
> 
> してみて neon, serf のどちらをリンクしているか確認の上、もし
> 
>>          libserf-1.so.0 => /usr/local/lib/libserf-1.so.0 (0x80203d000)
> 
> が出てくるようなら www/serf を入れてみてください。
>  
　もともと serf をいれる設定をしていなかったもので

　make config で
  [ ] SERF WebDAV/Delta-V (HTTP/HTTPS) repo access module

　のチェックを有効にし、

  make clean
  make reinstall

　することで無事、同期できるようになりました。
　ありがとうございます。