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Date:      Fri, 12 Jun 2020 11:22:49 GMT
From:      pkg-fallout@FreeBSD.org
To:        yuri@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [exp - 121amd64-default-build-as-user][science/py-pygmo2] Failed for py37-pygmo2-2.15.0.121 in configure
Message-ID:  <202006121122.05CBMnHf025418@package19.nyi.freebsd.org>

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Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: yuri@FreeBSD.org
Ident:          $FreeBSD: head/science/py-pygmo2/Makefile 538337 2020-06-09 18:53:01Z yuri $
Log URL:        http://package19.nyi.freebsd.org/data/121amd64-default-build-as-user/538359/logs/py37-pygmo2-2.15.0.121.log
Build URL:      http://package19.nyi.freebsd.org/build.html?mastername=121amd64-default-build-as-user&build=538359
Log:

=>> Building science/py-pygmo2
build started at Fri Jun 12 11:22:16 UTC 2020
port directory: /usr/ports/science/py-pygmo2
package name: py37-pygmo2-2.15.0.121
building for: FreeBSD 121amd64-default-build-as-user-job-05 12.1-RELEASE-p6 FreeBSD 12.1-RELEASE-p6 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/py-pygmo2/Makefile 538337 2020-06-09 18:53:01Z yuri $
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=======================<phase: check-sanity   >============================
===>  License MPL20 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py37-pygmo2-2.15.0.121 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.14.4.txz
[121amd64-default-build-as-user-job-05] Installing pkg-1.14.4...
[121amd64-default-build-as-user-job-05] Extracting pkg-1.14.4: .......... done
===>   py37-pygmo2-2.15.0.121 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py37-pygmo2-2.15.0.121
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License MPL20 accepted by the user
=> esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/esa/pygmo2/tar.gz/v2.15.0-121-gbe6c148?dummy=/esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz
fetch: https://codeload.github.com/esa/pygmo2/tar.gz/v2.15.0-121-gbe6c148?dummy=/esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/esa/pygmo2/tar.gz/v2.15.0-121-gbe6c148?dummy=/esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz: size of remote file is not known
esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz            2954 kB   16 MBps    00s
===> Fetching all distfiles required by py37-pygmo2-2.15.0.121 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License MPL20 accepted by the user
===> Fetching all distfiles required by py37-pygmo2-2.15.0.121 for building
=> SHA256 Checksum OK for esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License MPL20 accepted by the user
===> Fetching all distfiles required by py37-pygmo2-2.15.0.121 for building
===>  Extracting for py37-pygmo2-2.15.0.121
=> SHA256 Checksum OK for esa-pygmo2-v2.15.0-121-gbe6c148_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py37-pygmo2-2.15.0.121
===========================================================================
=======================<phase: build-depends  >============================
===>   py37-pygmo2-2.15.0.121 depends on package: pybind11>0 - not found
===>   Installing existing package /packages/All/pybind11-2.5.0.txz
[121amd64-default-build-as-user-job-05] Installing pybind11-2.5.0...
[121amd64-default-build-as-user-job-05] Extracting pybind11-2.5.0: .......... done
===>   py37-pygmo2-2.15.0.121 depends on package: pybind11>0 - found
===>   Returning to build of py37-pygmo2-2.15.0.121
===>   py37-pygmo2-2.15.0.121 depends on file: /usr/local/bin/cmake - not found
===>   Installing existing package /packages/All/cmake-3.17.3.txz
[121amd64-default-build-as-user-job-05] Installing cmake-3.17.3...
[121amd64-default-build-as-user-job-05] `-- Installing curl-7.70.0_1...
[121amd64-default-build-as-user-job-05] |   `-- Installing ca_root_nss-3.53...
[121amd64-default-build-as-user-job-05] |   `-- Extracting ca_root_nss-3.53: ........ done
[121amd64-default-build-as-user-job-05] |   `-- Installing libnghttp2-1.41.0...
[121amd64-default-build-as-user-job-05] |   `-- Extracting libnghttp2-1.41.0: .......... done
[121amd64-default-build-as-user-job-05] `-- Extracting curl-7.70.0_1: .......... done
[121amd64-default-build-as-user-job-05] `-- Installing expat-2.2.8...
[121amd64-default-build-as-user-job-05] `-- Extracting expat-2.2.8: .......... done
[121amd64-default-build-as-user-job-05] `-- Installing jsoncpp-1.9.2...
[121amd64-default-build-as-user-job-05] `-- Extracting jsoncpp-1.9.2: .......... done
<snip>

This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem
===>   py37-pygmo2-2.15.0.121 depends on file: /usr/local/bin/cmake - found
===>   Returning to build of py37-pygmo2-2.15.0.121
===>   py37-pygmo2-2.15.0.121 depends on executable: ninja - not found
===>   Installing existing package /packages/All/ninja-1.10.0,2.txz
[121amd64-default-build-as-user-job-05] Installing ninja-1.10.0,2...
[121amd64-default-build-as-user-job-05] `-- Installing python37-3.7.7...
[121amd64-default-build-as-user-job-05] |   `-- Installing libffi-3.2.1_3...
[121amd64-default-build-as-user-job-05] |   `-- Extracting libffi-3.2.1_3: .......... done
[121amd64-default-build-as-user-job-05] |   `-- Installing readline-8.0.4...
[121amd64-default-build-as-user-job-05] |   `-- Extracting readline-8.0.4: .......... done
[121amd64-default-build-as-user-job-05] `-- Extracting python37-3.7.7: .......... done
[121amd64-default-build-as-user-job-05] Extracting ninja-1.10.0,2: ........ done
=====
Message from python37-3.7.7:

--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py37-gdbm       databases/py-gdbm@py37
py37-sqlite3    databases/py-sqlite3@py37
py37-tkinter    x11-toolkits/py-tkinter@py37
===>   py37-pygmo2-2.15.0.121 depends on executable: ninja - found
===>   Returning to build of py37-pygmo2-2.15.0.121
===>   py37-pygmo2-2.15.0.121 depends on file: /usr/local/bin/python3.7 - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   py37-pygmo2-2.15.0.121 depends on shared library: libpagmo.so - not found
===>   Installing existing package /packages/All/pagmo2-2.11.4_3.txz
[121amd64-default-build-as-user-job-05] Installing pagmo2-2.11.4_3...
[121amd64-default-build-as-user-job-05] `-- Installing Ipopt-3.12.13_2...
[121amd64-default-build-as-user-job-05] |   `-- Installing blas-3.5.0_6...
[121amd64-default-build-as-user-job-05] |   | `-- Installing gcc9-9.3.0_1...
[121amd64-default-build-as-user-job-05] |   |   `-- Installing binutils-2.33.1_2,1...
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting binutils-2.33.1_2,1: .......... done
[121amd64-default-build-as-user-job-05] |   |   `-- Installing gmp-6.2.0...
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting gmp-6.2.0: .......... done
[121amd64-default-build-as-user-job-05] |   |   `-- Installing mpc-1.1.0_2...
[121amd64-default-build-as-user-job-05] |   |   | `-- Installing mpfr-4.0.2...
[121amd64-default-build-as-user-job-05] |   |   | `-- Extracting mpfr-4.0.2: .......... done
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting mpc-1.1.0_2: ......... done
[121amd64-default-build-as-user-job-05] |   | `-- Extracting gcc9-9.3.0_1: .......... done
[121amd64-default-build-as-user-job-05] |   `-- Extracting blas-3.5.0_6: ....... done
[121amd64-default-build-as-user-job-05] |   `-- Installing lapack-3.5.0_8...
[121amd64-default-build-as-user-job-05] |   `-- Extracting lapack-3.5.0_8: .......... done
[121amd64-default-build-as-user-job-05] `-- Extracting Ipopt-3.12.13_2: .......... done
[121amd64-default-build-as-user-job-05] `-- Installing boost-libs-1.72.0_2...
[121amd64-default-build-as-user-job-05] |   `-- Installing icu-67.1,1...
[121amd64-default-build-as-user-job-05] |   `-- Extracting icu-67.1,1: .......... done
[121amd64-default-build-as-user-job-05] `-- Extracting boost-libs-1.72.0_2: .......... done
[121amd64-default-build-as-user-job-05] `-- Installing eigen-3.3.7...
[121amd64-default-build-as-user-job-05] `-- Extracting eigen-3.3.7: .......... done
[121amd64-default-build-as-user-job-05] `-- Installing nlopt-2.6.2...
[121amd64-default-build-as-user-job-05] |   `-- Installing guile2-2.2.7...
[121amd64-default-build-as-user-job-05] |   | `-- Installing boehm-gc-threaded-8.0.4_1...
[121amd64-default-build-as-user-job-05] |   |   `-- Installing boehm-gc-8.0.4_1...
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting boehm-gc-8.0.4_1: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Extracting boehm-gc-threaded-8.0.4_1: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Installing libltdl-2.4.6...
[121amd64-default-build-as-user-job-05] |   | `-- Extracting libltdl-2.4.6: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Installing libunistring-0.9.10_1...
[121amd64-default-build-as-user-job-05] |   | `-- Extracting libunistring-0.9.10_1: .......... done
[121amd64-default-build-as-user-job-05] |   `-- Extracting guile2-2.2.7: .......... done
[121amd64-default-build-as-user-job-05] |   `-- Installing py37-numpy-1.16.6,1...
[121amd64-default-build-as-user-job-05] |   | `-- Installing openblas-0.3.9_2,1...
[121amd64-default-build-as-user-job-05] |   | `-- Extracting openblas-0.3.9_2,1: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Installing py37-setuptools-44.0.0...
[121amd64-default-build-as-user-job-05] |   | `-- Extracting py37-setuptools-44.0.0: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Installing suitesparse-5.7.2_1...
[121amd64-default-build-as-user-job-05] |   |   `-- Installing metis-5.1.0_8...
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting metis-5.1.0_8: .......... done
[121amd64-default-build-as-user-job-05] |   |   `-- Installing tbb-2020.2...
[121amd64-default-build-as-user-job-05] |   |   `-- Extracting tbb-2020.2: .......... done
[121amd64-default-build-as-user-job-05] |   | `-- Extracting suitesparse-5.7.2_1: .......... done
[121amd64-default-build-as-user-job-05] |   `-- Extracting py37-numpy-1.16.6,1: .......... done
[121amd64-default-build-as-user-job-05] `-- Extracting nlopt-2.6.2: .......... done
[121amd64-default-build-as-user-job-05] Extracting pagmo2-2.11.4_3: .......... done
=====
Message from gcc9-9.3.0_1:

--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc9

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from boost-libs-1.72.0_2:

--
You have built the Boost library with thread support.

Don't forget to add -pthread to your linker options when
linking your code.
===>   py37-pygmo2-2.15.0.121 depends on shared library: libpagmo.so - found (/usr/local/lib/libpagmo.so)
===>   Returning to build of py37-pygmo2-2.15.0.121
===>   py37-pygmo2-2.15.0.121 depends on shared library: libboost_serialization.so - found (/usr/local/lib/libboost_serialization.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py37-pygmo2-2.15.0.121
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/py-pygmo2/work/.build
-- The CXX compiler identification is Clang 8.0.1
-- The C compiler identification is Clang 8.0.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- System name: FreeBSD
-- pygmo version: 2.16.0
-- '-Wshadow': debug flag is supported by the compiler, enabling.
-- '-Wtautological-overlap-compare': debug flag is supported by the compiler, enabling.
-- '-Wtautological-compare': debug flag is supported by the compiler, enabling.
-- '-Wtautological-bitwise-compare': debug flag is not supported by the compiler.
-- '-Wbitwise-conditional-parentheses': debug flag is not supported by the compiler.
-- '-Wrange-loop-analysis': debug flag is supported by the compiler, enabling.
-- '-Wmisleading-indentation': debug flag is not supported by the compiler.
-- '-Wc99-designator': debug flag is not supported by the compiler.
-- '-Wreorder-init-list': debug flag is not supported by the compiler.
-- '-Wsizeof-pointer-div': debug flag is supported by the compiler, enabling.
-- '-Wsizeof-array-div': debug flag is not supported by the compiler.
-- '-Wxor-used-as-pow': debug flag is not supported by the compiler.
-- '-Wfinal-dtor-non-final-class': debug flag is not supported by the compiler.
-- '-Wall': debug flag is supported by the compiler, enabling.
-- '-Wextra': debug flag is supported by the compiler, enabling.
-- '-Wnon-virtual-dtor': debug flag is supported by the compiler, enabling.
-- '-Wlogical-op': debug flag is not supported by the compiler.
-- '-Wconversion': debug flag is supported by the compiler, enabling.
-- '-Wdeprecated': debug flag is supported by the compiler, enabling.
-- '-ftemplate-depth=1024': flag is supported by the compiler, enabling.
-- '-Wold-style-cast': debug flag is supported by the compiler, enabling.
-- '-pedantic-errors': debug flag is not supported by the compiler.
-- '-Wdisabled-optimization': debug flag is supported by the compiler, enabling.
-- '-ftemplate-backtrace-limit=0': debug flag is supported by the compiler, enabling.
-- '-fstack-protector-all': debug flag is supported by the compiler, enabling.
-- '-Wsuggest-attribute=pure': debug flag is not supported by the compiler.
-- '-Wsuggest-attribute=const': debug flag is not supported by the compiler.
-- '-Wsuggest-attribute=noreturn': debug flag is not supported by the compiler.
-- '-Wsuggest-attribute=format': debug flag is not supported by the compiler.
-- '-Wodr': debug flag is supported by the compiler, enabling.
-- '-Wsuggest-final-types': debug flag is not supported by the compiler.
-- '-Wsuggest-final-methods': debug flag is not supported by the compiler.
-- '-Wsuggest-override': debug flag is not supported by the compiler.
-- '-Wshift-negative-value': debug flag is supported by the compiler, enabling.
-- '-Wshift-overflow=2': debug flag is not supported by the compiler.
-- '-Wduplicated-cond': debug flag is not supported by the compiler.
-- '-Wnull-dereference': debug flag is supported by the compiler, enabling.
-- '-Wrestrict': debug flag is not supported by the compiler.
-- '-Waligned-new': debug flag is not supported by the compiler.
-- '-Wcast-align=strict': debug flag is not supported by the compiler.
-- '-fdiagnostics-show-template-tree': flag is supported by the compiler, enabling.
-- The C++ compiler ID is: Clang
-- YACMA autodetected C++ flags: -ftemplate-depth=1024;-fdiagnostics-show-template-tree
-- YACMA autodetected C++ debug flags: -Wshadow;-Werror;-Wtautological-overlap-compare;-Wtautological-compare;-Wrange-loop-analysis;-Wsizeof-pointer-div;-Wall;-Wextra;-Wnon-virtual-dtor;-Wconversion;-Wdeprecated;-Wold-style-cast;-Wdisabled-optimization;-ftemplate-backtrace-limit=0;-fstack-protector-all;-Wodr;-Wshift-negative-value;-Wnull-dereference
-- Library installation directory: lib
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Found Threads: TRUE  
-- Required Boost libraries: serialization
-- Found Boost: /usr/local/include (found suitable version "1.72.0", minimum required is "1.60.0") found components: serialization 
-- Detected Boost version: 107200
-- Boost include dirs: /usr/local/include
-- Found Eigen3: /usr/local/include/eigen3 (Required is at least version "2.91.0") 
-- Found NLOPT: /usr/local/include  
-- Found IPOPT: /usr/local/include/coin  
CMake Error at CMakeLists.txt:159 (message):
  The minimum pagmo version required by pygmo is 2.13.0, but version 2.11.4
  was found instead.


-- Configuring incomplete, errors occurred!
See also "/wrkdirs/usr/ports/science/py-pygmo2/work/.build/CMakeFiles/CMakeOutput.log".
See also "/wrkdirs/usr/ports/science/py-pygmo2/work/.build/CMakeFiles/CMakeError.log".
*** Error code 1

Stop.
make: stopped in /usr/ports/science/py-pygmo2



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