Date: Sat, 24 Jul 2021 20:34:36 +0000 From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 257396] math/py-numpy typo in ATLAS option forces use of lapack instead of alapack Message-ID: <bug-257396-7788@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D257396 Bug ID: 257396 Summary: math/py-numpy typo in ATLAS option forces use of lapack instead of alapack Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Some People Priority: --- Component: Individual Port(s) Assignee: python@FreeBSD.org Reporter: alt2600@icloud.com Assignee: python@FreeBSD.org Flags: maintainer-feedback?(python@FreeBSD.org) Created attachment 226659 --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=3D226659&action= =3Dedit patch-Makefile-fixtypo-alapack Not sure if this is intended or not but if the ATLAS option is taken the la= pack lib in the ATLAS_VARS as the string defines to use alpack for lapack librar= y, but it should be alapack, see output of configure. I only ask and post as I have used the framework of this numpy port to get scipy building with other blas libraries using the same mechanisms to dynamically set site.cfg, and it seems to work, but I noticed it was not using the Atlas libalapack libraries but instead saying it is using atlas wihtout atlas lapack and defaulting ba= ck to normal lapack. Just want to make sure this is a typo and intent is to use the atlas lapack version for the ATLAS option. see below and attached patch= . I just want to make sure I prepare the best version for the scipy patch I am preparing by checking this first. in both cases numpy builds with no orphan= s. ###Unpatched Uses lapack creating /tmp/tmplnipbtve/tmp creating /tmp/tmplnipbtve/tmp/tmplnipbtve compile options: '-MMD -MF /tmp/tmplnipbtve/file.c.d -c' cc: /tmp/tmplnipbtve/file.c FOUND: libraries =3D ['lapack', 'lapack'] library_dirs =3D ['/usr/local/lib'] language =3D f77 FOUND: include_dirs =3D ['/usr/local/include'] language =3D f77 libraries =3D ['ptf77blas', 'ptcblas', 'lapack', 'lapack'] library_dirs =3D ['/usr/local/lib'] define_macros =3D [('ATLAS_WITHOUT_LAPACK', None)] /usr/local/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'define_macros' warnings.warn(msg) running config ###With Patch use Atlas's lapack creating /tmp/tmpebgjdj2s/tmp creating /tmp/tmpebgjdj2s/tmp/tmpebgjdj2s compile options: '-MMD -MF /tmp/tmpebgjdj2s/file.c.d -c' cc: /tmp/tmpebgjdj2s/file.c libraries tatlas not found in ['/usr/lib', '/usr/local/lib', '/usr/local/lib/gcc10/gcc/x86_64-portbld-freebsd12.2/10.3.0/../../../'] Library tatlas was not found. Ignoring FOUND: include_dirs =3D ['/usr/local/include'] language =3D f77 libraries =3D ['alapack', 'ptf77blas', 'ptcblas'] library_dirs =3D ['/usr/local/lib'] define_macros =3D [('ATLAS_INFO', '"None"')] FOUND: include_dirs =3D ['/usr/local/include'] language =3D f77 libraries =3D ['alapack', 'ptf77blas', 'ptcblas'] library_dirs =3D ['/usr/local/lib'] define_macros =3D [('ATLAS_INFO', '"None"')] /usr/local/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'define_macros' warnings.warn(msg) running config --=20 You are receiving this mail because: You are the assignee for the bug.=
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