Date: Thu, 14 Jul 2016 09:26:42 +0000 (UTC) From: TAKATSU Tomonari <tota@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r418525 - in head/math: . R-cran-mcmc Message-ID: <201607140926.u6E9QgAh028266@repo.freebsd.org>
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Author: tota Date: Thu Jul 14 09:26:42 2016 New Revision: 418525 URL: https://svnweb.freebsd.org/changeset/ports/418525 Log: - Add new port: math/R-cran-mcmc Simulates continuous distributions of random vectors using Markov chain Monte Carlo (MCMC). Users specify the distribution by an R function that evaluates the log unnormalized density. Algorithms are random walk Metropolis algorithm (function metrop), simulated tempering (function temper), and morphometric random walk Metropolis (Johnson and Geyer, Annals of Statistics, 2012, function morph.metrop), which achieves geometric ergodicity by change of variable. WWW: https://cran.r-project.org/web/packages/mcmc/ Added: head/math/R-cran-mcmc/ head/math/R-cran-mcmc/Makefile (contents, props changed) head/math/R-cran-mcmc/distinfo (contents, props changed) head/math/R-cran-mcmc/pkg-descr (contents, props changed) Modified: head/math/Makefile (contents, props changed) Modified: head/math/Makefile ============================================================================== --- head/math/Makefile Thu Jul 14 09:00:29 2016 (r418524) +++ head/math/Makefile Thu Jul 14 09:26:42 2016 (r418525) @@ -46,6 +46,7 @@ SUBDIR += R-cran-lazyeval SUBDIR += R-cran-lme4 SUBDIR += R-cran-maxLik + SUBDIR += R-cran-mcmc SUBDIR += R-cran-memisc SUBDIR += R-cran-minqa SUBDIR += R-cran-miscTools Added: head/math/R-cran-mcmc/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-mcmc/Makefile Thu Jul 14 09:26:42 2016 (r418525) @@ -0,0 +1,16 @@ +# Created by: TAKATSU Tomonari <tota@FreeBSD.org> +# $FreeBSD$ + +PORTNAME= mcmc +DISTVERSION= 0.9-4 +CATEGORIES= math +DISTNAME= ${PORTNAME}_${DISTVERSION} + +MAINTAINER= tota@FreeBSD.org +COMMENT= Markov Chain Monte Carlo + +LICENSE= MIT + +USES= cran:compiles,auto-plist + +.include <bsd.port.mk> Added: head/math/R-cran-mcmc/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-mcmc/distinfo Thu Jul 14 09:26:42 2016 (r418525) @@ -0,0 +1,3 @@ +TIMESTAMP = 1468312445 +SHA256 (mcmc_0.9-4.tar.gz) = ca4e234d5c5240c5fb0da9dc7dade49f10c743c9681a05feb711b9468c0448f3 +SIZE (mcmc_0.9-4.tar.gz) = 1921404 Added: head/math/R-cran-mcmc/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-mcmc/pkg-descr Thu Jul 14 09:26:42 2016 (r418525) @@ -0,0 +1,9 @@ +Simulates continuous distributions of random vectors using Markov +chain Monte Carlo (MCMC). Users specify the distribution by an R +function that evaluates the log unnormalized density. Algorithms +are random walk Metropolis algorithm (function metrop), simulated +tempering (function temper), and morphometric random walk Metropolis +(Johnson and Geyer, Annals of Statistics, 2012, function morph.metrop), +which achieves geometric ergodicity by change of variable. + +WWW: https://cran.r-project.org/web/packages/mcmc/
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