Date: Sat, 25 Sep 2004 21:12:21 GMT From: Lee Harr <missive@hotmail.com> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/72089: math/rpy builds but does not work Message-ID: <200409252112.i8PLCLUO032761@www.freebsd.org> Resent-Message-ID: <200409252120.i8PLKPi6084666@freefall.freebsd.org>
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>Number: 72089
>Category: ports
>Synopsis: math/rpy builds but does not work
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: sw-bug
>Submitter-Id: current-users
>Arrival-Date: Sat Sep 25 21:20:25 GMT 2004
>Closed-Date:
>Last-Modified:
>Originator: Lee Harr
>Release: 4.10
>Organization:
>Environment:
FreeBSD homer 4.10-STABLE FreeBSD 4.10-STABLE #10: Sat Sep 11 13:09:56 EDT 2004 root@homer:/mnt/obj/mnt/src/sys/HOMER i386
>Description:
After installing the math/rpy port, there is an error trying to import the python module:
ImportError: /usr/local/lib/python2.3/site-packages/_rpymodule.so: Undefined symbol "jump_now"
>How-To-Repeat:
Install port math/rpy then ...
$python
Python 2.3.4 (#2, Aug 23 2004, 11:46:20)
[GCC 2.95.4 20020320 [FreeBSD]] on freebsd4
Type "help", "copyright", "credits" or "license" for more information.
>Fix:
I found a patch on the rpy mailing list which at least allows the module to be imported and used on some of the demo code:
--- rpy-0.3.1.orig/src/RPy.h
+++ rpy-0.3.1/src/RPy.h
@@ -90,7 +90,8 @@
PyOS_sighandler_t python_sigint;
/* R function for jumping to toplevel context */
-extern void jump_now(void);
+/* extern void jump_now(void); */
+extern void Rf_onintr(void);
/* Global interpreter */
PyInterpreterState *my_interp;
--- rpy-0.3.1.orig/src/R_eval.c
+++ rpy-0.3.1/src/R_eval.c
@@ -65,7 +65,8 @@
void interrupt_R(int signum)
{
interrupted = 1;
- jump_now();
+ /* jump_now(); */
+ Rf_onintr();
}
>Release-Note:
>Audit-Trail:
>Unformatted:
>>> import rpy
Traceback (most recent call last):
File "<stdin>", line 1, in ?
File "/usr/local/lib/python2.3/site-packages/rpy.py", line 24, in ?
import _rpy
ImportError: /usr/local/lib/python2.3/site-packages/_rpymodule.so: Undefined symbol "jump_now"
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