From owner-freebsd-ports-bugs@FreeBSD.ORG Thu Nov 14 18:00:02 2013 Return-Path: Delivered-To: freebsd-ports-bugs@smarthost.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id D9FAA937 for ; Thu, 14 Nov 2013 18:00:02 +0000 (UTC) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:1900:2254:206c::16:87]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id BAD7C2FED for ; Thu, 14 Nov 2013 18:00:02 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.7/8.14.7) with ESMTP id rAEI02Is079965 for ; Thu, 14 Nov 2013 18:00:02 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.7/8.14.7/Submit) id rAEI02fV079964; Thu, 14 Nov 2013 18:00:02 GMT (envelope-from gnats) Resent-Date: Thu, 14 Nov 2013 18:00:02 GMT Resent-Message-Id: <201311141800.rAEI02fV079964@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Kurt Jaeger Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id A167C820 for ; Thu, 14 Nov 2013 17:59:04 +0000 (UTC) Received: from f10.opsec.eu (f10.opsec.eu [IPv6:2001:14f8:200:4::2]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id 5D0822FD9 for ; Thu, 14 Nov 2013 17:59:04 +0000 (UTC) Received: from pi by f10.opsec.eu with local (Exim 4.80.1 (FreeBSD)) (envelope-from ) id 1Vh1By-000Dw0-FC; Thu, 14 Nov 2013 18:58:58 +0100 Message-Id: Date: Thu, 14 Nov 2013 18:58:58 +0100 From: Kurt Jaeger To: FreeBSD-gnats-submit@freebsd.org X-Send-Pr-Version: 3.114 Subject: ports/183960: [patch update] biology/seqtools 4.22 -> 4.23 Cc: gb10@sanger.ac.uk X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.16 Precedence: list Reply-To: Kurt Jaeger List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 14 Nov 2013 18:00:03 -0000 >Number: 183960 >Category: ports >Synopsis: [patch update] biology/seqtools 4.22 -> 4.23 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Thu Nov 14 18:00:01 UTC 2013 >Closed-Date: >Last-Modified: >Originator: Kurt Jaeger >Release: FreeBSD 10.0-BETA3 amd64 >Organization: - >Environment: System: FreeBSD f10.opsec.eu 10.0-BETA3 FreeBSD 10.0-BETA3 #0 r257580: Sun Nov 3 19:43:01 UTC 2013 root@snap.freebsd.org:/usr/obj/usr/src/sys/GENERIC amd64 >Description: update biology/seqtools 4.22 -> 4.23 to fix missing distfiles >How-To-Repeat: - >Fix: diff -r -u -N biology/seqtools/Makefile /usr/home/pi/myp/biology/seqtools/Makefile --- biology/seqtools/Makefile 2013-11-10 23:12:05.000000000 +0100 +++ /usr/home/pi/myp/biology/seqtools/Makefile 2013-11-14 18:53:24.000000000 +0100 @@ -2,7 +2,7 @@ # $FreeBSD: head/biology/seqtools/Makefile 333374 2013-11-10 11:01:02Z wg $ PORTNAME= seqtools -PORTVERSION= 4.22 +PORTVERSION= 4.23 CATEGORIES= biology MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/ @@ -19,7 +19,7 @@ USE_GCC= any USE_GNOME= gtk20 CFLAGS= -I${LOCALBASE}/include -LDFLAGS= -L${LOCALBASE}/lib -lexecinfo -lcurl +LDFLAGS= -L${LOCALBASE}/lib -lexecinfo -lcurl -lm MAKE_JOBS_UNSAFE= yes .include diff -r -u -N biology/seqtools/distinfo /usr/home/pi/myp/biology/seqtools/distinfo --- biology/seqtools/distinfo 2013-11-10 23:12:05.000000000 +0100 +++ /usr/home/pi/myp/biology/seqtools/distinfo 2013-11-14 18:51:43.000000000 +0100 @@ -1,2 +1,2 @@ -SHA256 (seqtools-4.22.tar.gz) = c0e782e7b5f705056a91c038684bde41833aba89bd7b4ba8531c15bb6ebf5ea8 -SIZE (seqtools-4.22.tar.gz) = 7049945 +SHA256 (seqtools-4.23.tar.gz) = 1ff07a646a0d7252ad2ec3e5095e5ee9dc2ea0a129830dbe87f6d3cdbff184aa +SIZE (seqtools-4.23.tar.gz) = 7050014 >Release-Note: >Audit-Trail: >Unformatted: