Date: Thu, 17 Jul 2008 20:06:37 GMT From: "Pedro F. Giffuni" <giffunip@tutopia.com> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/125725: New port science/silo Message-ID: <200807172006.m6HK6b48009810@www.freebsd.org> Resent-Message-ID: <200807172010.m6HKA0dq034517@freefall.freebsd.org>
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>Number: 125725 >Category: ports >Synopsis: New port science/silo >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Thu Jul 17 20:10:00 UTC 2008 >Closed-Date: >Last-Modified: >Originator: Pedro F. Giffuni >Release: 6.3-Release >Organization: >Environment: FreeBSD kakumen.cable.net.co 6.3-RELEASE FreeBSD 6.3-RELEASE #10: Sat Jan 19 01:13:55 COT 2008 root@kakumen.cable.net.co:/usr/src/sys/amd64/compile/SMP amd64 >Description: Silo is a data format and library developed at Lawrence Livermore National Laboratory (LLNL) for storing rectilinear, curvilinear, unstructured, or point meshes in 2D and 3D. It is a requirement for LLNL's VisIt Visualizer. >How-To-Repeat: >Fix: # This is a shell archive. Save it in a file, remove anything before # this line, and then unpack it by entering "sh file". Note, it may # create directories; files and directories will be owned by you and # have default permissions. # # This archive contains: # # ./silo # ./silo/Makefile # ./silo/distinfo # ./silo/pkg-descr # ./silo/pkg-plist # ./silo/files # ./silo/files/patch-tests+Makefile.in # echo c - ./silo mkdir -p ./silo > /dev/null 2>&1 echo x - ./silo/Makefile sed 's/^X//' >./silo/Makefile << 'END-of-./silo/Makefile' X# New ports collection makefile for: silo X# Date created: 17 jul 2008 X# Whom: pfg X# X# $FreeBSD$ X# X XPORTNAME= silo XPORTVERSION= 4.6.1 XCATEGORIES= science XMASTER_SITES= https://wci.llnl.gov/codes/${PORTNAME}/silo-${PORTVERSION}/ X XMAINTAINER= giffunip@tutopia.com XCOMMENT= A mesh and field I/O library and scientific database X XLIB_DEPENDS= netcdf.4:${PORTSDIR}/science/netcdf X XUSE_AUTOTOOLS= libtool:15 XGNU_CONFIGURE= yes XCONFIGURE_ENV= CPPFLAGS="${CFLAGS} ${PTHREAD_CFLAGS} -I${LOCALBASE}/include" \ X LDFLAGS="${LDFLAGS} ${PTHREAD_LIBS} -L${LOCALBASE}/lib" X XUSE_GMAKE= yes XCONFIGURE_ARGS= --enable-shared XUSE_LDCONFIG= yes X XUSE_XLIB= yes XUSE_QT_VER= 3 XQT_COMPONENTS= moc uic X XOPTIONS= PYTHON "Enable Python Module" On \ X HDF5 "Enable HDF5 Driver" Off \ X BROWSER "Enable Silex Browser" Off \ X FORTRAN "Compile Fortran interface" Off \ X OPTIMIZATION "Enable extra optimizations" On X X.include <bsd.port.pre.mk> X X.ifdef WITH_PYTHON XUSE_PYTHON= yes XCONFIGURE_ARGS+= --enable-pythonmodule XPLIST_SUB+= WITH_PYTHON="" X.else XPLIST_SUB+= WITH_PYTHON="@comment " X.endif X X.ifdef WITH_HDF5 XLIB_DEPENDS+= hdf5.0:${PORTSDIR}/science/hdf5 XCONFIGURE_ARGS= --with-hdf5=${LOCALBASE} XPLIST_SUB+= WITH_HDF5="" XPLIST_SUB+= WITH_HDF5="@comment " X.else XPLIST_SUB+= WITH_HDF5="@comment " XPLIST_SUB+= WITH_NCDF="" X.endif X X.ifdef WITH_BROWSER XCONFIGURE_ARGS+= --enable-silex XPLIST_SUB+= WITH_BROWSER="" X.else XPLIST_SUB+= WITH_BROWSER="@comment " X.endif X X.ifdef WITH_FORTRAN XUSE_FORTRAN= yes XCONFIGURE_ARGS+= --enable-fortran X.endif X X.ifdef WITH_OPTIMIZATION XCONFIGURE_ARGS+= --enable-optimization X.endif X Xregression-test: build X @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ${GMAKE} check X X.include <bsd.port.post.mk> END-of-./silo/Makefile echo x - ./silo/distinfo sed 's/^X//' >./silo/distinfo << 'END-of-./silo/distinfo' XMD5 (silo-4.6.1.tar.gz) = 34b030e8c098b89bd79ee1b23477b283 XSHA256 (silo-4.6.1.tar.gz) = 8e5c314db468613a2a6ddf7c3ce07a0a9f969e854e5957011f0cade184bf0ac7 XSIZE (silo-4.6.1.tar.gz) = 2618748 END-of-./silo/distinfo echo x - ./silo/pkg-descr sed 's/^X//' >./silo/pkg-descr << 'END-of-./silo/pkg-descr' X A mesh and field I/O library and scientific database X XSilo is a library for reading and writing a wide variety of scientific Xdata to binary, disk files. The files Silo produces and the data within Xthem can be easily shared and exchanged between wholly independently Xdeveloped applications running on disparate computing platforms. X XConsequently, Silo facilitates the development of general purpose tools Xfor processing scientific data. One of the more popular tools that process XSilo data files is the VisIt visualization tool. X XSilo supports gridless (point) meshes, structured meshes, unstructured-zoo Xand unstructured-arbitrary-polyhedral meshes, block structured AMR meshes, Xconstructive solid geometry (CSG) meshes, piecewise-constant (e.g. Xzone-centered) and piecewise-linear (e.g. node-centered) variables defined Xon the node, edge, face or volume elements of meshes as well as the Xdecomposition of meshes into arbitrary subset hierarchies including Xmaterials and mixing materials. In addition, Silo supports a wide variety Xof other useful objects to address various scientific computing Xapplication needs.Although the Silo library is a serial library, it has Xsome key features which enable it to be applied quite effectively and Xscalably in parallel. X XWWW: https://wci.llnl.gov/codes/silo/ END-of-./silo/pkg-descr echo x - ./silo/pkg-plist sed 's/^X//' >./silo/pkg-plist << 'END-of-./silo/pkg-plist' X%%WITH_BROWSER%%bin/browser Xbin/silodiff Xbin/silex Xbin/silock Xinclude/silo.h Xinclude/silo.inc Xinclude/pmpio.h X%%WITH_PYTHON%%lib/Silo.a X%%WITH_PYTHON%%lib/Silo.la X%%WITH_PYTHON%%lib/Silo.so X%%WITH_NCDF%%lib/libsilo.a X%%WITH_NCDF%%lib/libsilo.la X%%WITH_NCDF%%lib/libsilo.so X%%WITH_HDF5%%lib/libsiloh5.a X%%WITH_HDF5%%lib/libsiloh5.la X%%WITH_HDF5%%lib/libsiloh5.so END-of-./silo/pkg-plist echo c - ./silo/files mkdir -p ./silo/files > /dev/null 2>&1 echo x - ./silo/files/patch-tests+Makefile.in sed 's/^X//' >./silo/files/patch-tests+Makefile.in << 'END-of-./silo/files/patch-tests+Makefile.in' X--- tests/Makefile.in.orig 2008-03-27 13:56:49.000000000 -0500 X+++ tests/Makefile.in 2008-03-27 13:57:36.000000000 -0500 X@@ -407,7 +407,7 @@ X INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ X LDFLAGS = @LDFLAGS@ X LIBOBJS = @LIBOBJS@ X-LIBS = @LIBS@ X+LIBS = @LIBS@ -lcompat X LIBTOOL = @LIBTOOL@ X LN_S = @LN_S@ X LOCAL = @LOCAL@ END-of-./silo/files/patch-tests+Makefile.in exit >Release-Note: >Audit-Trail: >Unformatted:
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