Date: Sat, 7 Dec 2019 05:29:49 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 120armv6-quarterly][science/cdo] Failed for cdo-1.9.7_2 in lib-depends Message-ID: <201912070529.xB75Tnmi028443@beefy15.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: sunpoet@FreeBSD.org Last committer: gerald@FreeBSD.org Ident: $FreeBSD: branches/2019Q4/science/cdo/Makefile 507372 2019-07-26 20:46:53Z gerald $ Log URL: http://beefy15.nyi.freebsd.org/data/120armv6-quarterly/518877/logs/cdo-1.9.7_2.log Build URL: http://beefy15.nyi.freebsd.org/build.html?mastername=120armv6-quarterly&build=518877 Log: =>> Building science/cdo build started at Sat Dec 7 05:29:42 UTC 2019 port directory: /usr/ports/science/cdo package name: cdo-1.9.7_2 building for: FreeBSD 120armv6-quarterly-job-03 12.0-RELEASE-p12 FreeBSD 12.0-RELEASE-p12 1200086 arm maintained by: sunpoet@FreeBSD.org Makefile ident: $FreeBSD: branches/2019Q4/science/cdo/Makefile 507372 2019-07-26 20:46:53Z gerald $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300047 Jail OSVERSION: 1200086 Job Id: 03 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1200086 UNAME_v=FreeBSD 12.0-RELEASE-p12 1200086 UNAME_r=12.0-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/120armv6-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/120armv6-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=120armv6-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/120armv6-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for cdo-1.9.7_2: CGRIBEX=on: Use CGRIBEX library for GRIB1 files ECCODES=on: Use ecCodes for GRIB files HDF5=on: HDF-5 data format support JASPER=on: JPEG 2000 support via JasPer NETCDF=on: NetCDF data format support PROJ=on: PROJ.4 cartographic projections support SZIP=on: Szip compression support UDUNITS=on: Unidata units library (udunits) support UUID=on: UUID support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --disable-data --disable-extra --disable-fortran --disable-ieg --disable-openmp --disable-service --enable-cdi-lib --program-transform-name="" --with-zlib=/usr --with-cgribex --with-eccodes --with-hdf5 --with-jasper --with-netcdf --with-proj --with-szlib --with-udunits2 --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cdo/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cdo/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DACCEPT_USE_OF_DEPRECATED_PROJ_API_H -isystem /usr/local/include -std=c++11 " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CGRIBEX="" NO_CGRIBEX="@comment " ECCODES="" NO_ECCODES="@comment " HDF5="" NO_HDF5="@comment " JASPER="" NO_JASPER="@comment " NETCDF="" NO_NETCDF="@comment " PROJ="" NO_PROJ="@comment " SZIP="" NO_SZIP="@comment " UDUNITS="" NO_UDUNITS="@comment " UUID="" NO_UUID="@comment " OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cdo" EXAMPLESDIR="share/examples/cdo" DATADIR="share/cdo" WWWDIR="www/cdo" ETCDIR="etc/cdo" --End PLIST_SUB-- --SUB_LIST-- CGRIBEX="" NO_CGRIBEX="@comment " ECCODES="" NO_ECCODES="@comment " HDF5="" NO_HDF5="@comment " JASPER="" NO_JASPER="@comment " NETCDF="" NO_NETCDF="@comment " PROJ="" NO_PROJ="@comment " SZIP="" NO_SZIP="@comment " UDUNITS="" NO_UDUNITS="@comment " UUID="" NO_UUID="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cdo DOCSDIR=/usr/local/share/doc/cdo EXAMPLESDIR=/usr/local/share/examples/cdo WWWDIR=/usr/local/www/cdo ETCDIR=/usr/local/etc/cdo --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv6 OPSYS=FreeBSD _OSRELEASE=12.0-RELEASE-p12 OSREL=12.0 OSVERSION=1200086 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> cdo-1.9.7_2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0.txz [120armv6-quarterly-job-03] Installing pkg-1.12.0... [120armv6-quarterly-job-03] Extracting pkg-1.12.0: .......... done ===> cdo-1.9.7_2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of cdo-1.9.7_2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by cdo-1.9.7_2 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by cdo-1.9.7_2 for building => SHA256 Checksum OK for cdo-1.9.7.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by cdo-1.9.7_2 for building ===> Extracting for cdo-1.9.7_2 => SHA256 Checksum OK for cdo-1.9.7.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for cdo-1.9.7_2 ===> Applying FreeBSD patches for cdo-1.9.7_2 =========================================================================== =======================<phase: build-depends >============================ ===> cdo-1.9.7_2 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_3.txz [120armv6-quarterly-job-03] Installing gmake-4.2.1_3... [120armv6-quarterly-job-03] `-- Installing gettext-runtime-0.20.1... [120armv6-quarterly-job-03] | `-- Installing indexinfo-0.3.1... [120armv6-quarterly-job-03] | `-- Extracting indexinfo-0.3.1: .... done [120armv6-quarterly-job-03] `-- Extracting gettext-runtime-0.20.1: .......... done [120armv6-quarterly-job-03] Extracting gmake-4.2.1_3: .......... done ===> cdo-1.9.7_2 depends on executable: gmake - found ===> Returning to build of cdo-1.9.7_2 =========================================================================== =======================<phase: lib-depends >============================ ===> cdo-1.9.7_2 depends on shared library: libcgribex.so - not found ===> Installing existing package /packages/All/cgribex-1.9.0.txz [120armv6-quarterly-job-03] Installing cgribex-1.9.0... [120armv6-quarterly-job-03] `-- Installing hdf-szip-2.1.1... [120armv6-quarterly-job-03] `-- Extracting hdf-szip-2.1.1: .......... done [120armv6-quarterly-job-03] `-- Installing jasper-1.900.1_17... [120armv6-quarterly-job-03] | `-- Installing jpeg-turbo-2.0.3... [120armv6-quarterly-job-03] | `-- Extracting jpeg-turbo-2.0.3: .......... done [120armv6-quarterly-job-03] `-- Extracting jasper-1.900.1_17: .......... done [120armv6-quarterly-job-03] Extracting cgribex-1.9.0: .......... done ===> cdo-1.9.7_2 depends on shared library: libcgribex.so - found (/usr/local/lib/libcgribex.so) ===> Returning to build of cdo-1.9.7_2 ===> cdo-1.9.7_2 depends on shared library: libeccodes.so - not found ===> Installing existing package /packages/All/eccodes-2.13.1.txz Child process pid=28130 terminated abnormally: Segmentation fault *** Error code 139 Stop. make: stopped in /usr/ports/science/cdo
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