From owner-svn-ports-all@freebsd.org Mon Jul 30 19:47:51 2018 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 49638105F5E5; Mon, 30 Jul 2018 19:47:51 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id F12C4816D2; Mon, 30 Jul 2018 19:47:50 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id CD7AEF40; Mon, 30 Jul 2018 19:47:50 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id w6UJlops043688; Mon, 30 Jul 2018 19:47:50 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id w6UJloqe043685; Mon, 30 Jul 2018 19:47:50 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201807301947.w6UJloqe043685@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Mon, 30 Jul 2018 19:47:50 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r475906 - head/biology/py-pysam X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: head/biology/py-pysam X-SVN-Commit-Revision: 475906 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.27 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 30 Jul 2018 19:47:51 -0000 Author: yuri Date: Mon Jul 30 19:47:49 2018 New Revision: 475906 URL: https://svnweb.freebsd.org/changeset/ports/475906 Log: biology/py-pysam: Update 0.14.1 -> 0.15.0 Port changes: * Remove stripping: done by the project now * Update WWW Reported by: portscout Modified: head/biology/py-pysam/Makefile head/biology/py-pysam/distinfo head/biology/py-pysam/pkg-descr Modified: head/biology/py-pysam/Makefile ============================================================================== --- head/biology/py-pysam/Makefile Mon Jul 30 19:13:22 2018 (r475905) +++ head/biology/py-pysam/Makefile Mon Jul 30 19:47:49 2018 (r475906) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= pysam -DISTVERSION= 0.14.1 +DISTVERSION= 0.15.0 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -14,8 +14,5 @@ LICENSE_FILE= ${WRKSRC}/COPYING USES= gmake python USE_PYTHON= autoplist distutils cython cython_run - -post-install: - @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pysam/*.so .include Modified: head/biology/py-pysam/distinfo ============================================================================== --- head/biology/py-pysam/distinfo Mon Jul 30 19:13:22 2018 (r475905) +++ head/biology/py-pysam/distinfo Mon Jul 30 19:47:49 2018 (r475906) @@ -1,3 +1,3 @@ -TIMESTAMP = 1521619431 -SHA256 (pysam-0.14.1.tar.gz) = 2e86f5228429d08975c8adb9030296699012a8deba8ba26cbfc09b374f792c97 -SIZE (pysam-0.14.1.tar.gz) = 3154603 +TIMESTAMP = 1532978446 +SHA256 (pysam-0.15.0.tar.gz) = 51e7030bebff68502a69fabc601727f827cd6e7c08c5899b11ad8c6084ba4ba5 +SIZE (pysam-0.15.0.tar.gz) = 3223595 Modified: head/biology/py-pysam/pkg-descr ============================================================================== --- head/biology/py-pysam/pkg-descr Mon Jul 30 19:13:22 2018 (r475905) +++ head/biology/py-pysam/pkg-descr Mon Jul 30 19:47:49 2018 (r475906) @@ -7,4 +7,4 @@ This module provides a low-level wrapper around the ht cython and a high-level API for convenient access to the data within standard genomic file formats. -WWW: https://pypi.org/project/pysam/ +WWW: https://github.com/pysam-developers/pysam