Date: Wed, 15 Oct 2014 18:46:06 +0000 (UTC) From: Kurt Jaeger <pi@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r370943 - head/biology/seqtools Message-ID: <201410151846.s9FIk6fX095039@svn.freebsd.org>
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Author: pi Date: Wed Oct 15 18:46:05 2014 New Revision: 370943 URL: https://svnweb.freebsd.org/changeset/ports/370943 QAT: https://qat.redports.org/buildarchive/r370943/ Log: biology/seqtools: 4.28 -> 4.29 - Blixem o Added the facility to run Dotter on an ad-hoc sequence (RT:408836). o Added the facility to run Dotter against a transcript. - Dotter Minimise the greyramp tool to a simple contrast slider. Use Ctrl-G to toggle between this and the full greyramp tool. - Belvu Fix a bug with tree bootstrapping in Belvu. Modified: head/biology/seqtools/Makefile head/biology/seqtools/distinfo head/biology/seqtools/pkg-plist Modified: head/biology/seqtools/Makefile ============================================================================== --- head/biology/seqtools/Makefile Wed Oct 15 18:42:25 2014 (r370942) +++ head/biology/seqtools/Makefile Wed Oct 15 18:46:05 2014 (r370943) @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= seqtools -PORTVERSION= 4.28 +PORTVERSION= 4.29 CATEGORIES= biology MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/ Modified: head/biology/seqtools/distinfo ============================================================================== --- head/biology/seqtools/distinfo Wed Oct 15 18:42:25 2014 (r370942) +++ head/biology/seqtools/distinfo Wed Oct 15 18:46:05 2014 (r370943) @@ -1,2 +1,2 @@ -SHA256 (seqtools-4.28.tar.gz) = 0888663d97c24498d351fcedb45513866c558c002433811841711c530c93a44c -SIZE (seqtools-4.28.tar.gz) = 5363545 +SHA256 (seqtools-4.29.tar.gz) = c888832eb7903f2466ed05e543b73e9579a65da149d61ca96a6ada1ecadb84a2 +SIZE (seqtools-4.29.tar.gz) = 5372524 Modified: head/biology/seqtools/pkg-plist ============================================================================== --- head/biology/seqtools/pkg-plist Wed Oct 15 18:42:25 2014 (r370942) +++ head/biology/seqtools/pkg-plist Wed Oct 15 18:46:05 2014 (r370943) @@ -13,4 +13,3 @@ bin/dotter %%PORTDOCS%%%%DOCSDIR%%/dotter_usage.txt %%PORTDOCS%%%%DOCSDIR%%/release_notes.html %%PORTDOCS%%%%DOCSDIR%%/todo.html -%%PORTDOCS%%@dirrmtry %%DOCSDIR%%
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