Date: Sat, 3 Apr 2021 01:52:58 GMT From: pkg-fallout@FreeBSD.org To: h2+fbsdports@fsfe.org Cc: pkg-fallout@FreeBSD.org Subject: [package - main-amd64-default][biology/ugene] Failed for ugene-38.0 in fetch Message-ID: <202104030152.1331qwMj069636@beefy18.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: h2+fbsdports@fsfe.org Last committer: danfe@FreeBSD.org Ident: $FreeBSD: head/biology/ugene/Makefile 569026 2021-03-23 14:20:49Z danfe $ Log URL: http://beefy18.nyi.freebsd.org/data/main-amd64-default/p569609_s4d221f59b8/logs/ugene-38.0.log Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=main-amd64-default&build=p569609_s4d221f59b8 Log: =>> Building biology/ugene build started at Sat Apr 3 01:52:52 UTC 2021 port directory: /usr/ports/biology/ugene package name: ugene-38.0 building for: FreeBSD main-amd64-default-job-12 14.0-CURRENT FreeBSD 14.0-CURRENT 1400006 amd64 maintained by: h2+fbsdports@fsfe.org Makefile ident: $FreeBSD: head/biology/ugene/Makefile 569026 2021-03-23 14:20:49Z danfe $ Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1400003 Jail OSVERSION: 1400006 Job Id: 12 !!! Jail is newer than host. (Jail: 1400006, Host: 1400003) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh OSVERSION=1400006 UNAME_v=FreeBSD 14.0-CURRENT 1400006 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for ugene-38.0: OPENCL=off: Heterogeneous computing via OpenCL ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- h2+fbsdports@fsfe.org --End MAINTAINER-- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt5 --with-qt-libraries=/usr/local/lib/qt5 --with-extra-includes=/usr/local/include --with-extra-libs=/usr/local/lib --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/biology/ugene/work/ugene-38.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" QTDIR="/usr/local/lib/qt5" QMAKE="/usr/local/lib/qt5/bin/qmake" MOC="/usr/local/lib/qt5/bin/moc" RCC="/usr/local/lib/qt5/bin/rcc" UIC="/usr/local/lib/qt5/bin/uic" QMAKESPEC="/usr/local/lib/qt5/mkspecs/freebsd-$(ccver="$(c++ --version)"; case "$ccver" in *clang*) echo clang ;; *) echo g++ ;; esac)" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/ugene/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/biology/ugene/work/ugene-38.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/ugene/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- QT_BINDIR="lib/qt5/bin" QT_INCDIR="include/qt5" QT_LIBDIR="lib/qt5" QT_ARCHDIR="lib/qt5" QT_PLUGINDIR="lib/qt5/plugins" QT_LIBEXECDIR="libexec/qt5" QT_IMPORTDIR="lib/qt5/imports" QT_QMLDIR="lib/qt5/qml" QT_DATADIR="share/qt5" QT_DOCDIR="share/doc/qt5" QT_L10NDIR="share/qt5/translations" QT_EXAMPLEDIR="share/examples/qt5" QT_TESTDIR="share/qt5/tests" QT_MKSPECDIR="lib/qt5/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" DEBUG="@comment " OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/ugene" EXAMPLESDIR="share/examples/ugene" DATADIR="share/ugene" WWWDIR="www/ugene" ETCDIR="etc/ugene" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/ugene DOCSDIR=/usr/local/share/doc/ugene EXAMPLESDIR=/usr/local/share/examples/ugene WWWDIR=/usr/local/www/ugene ETCDIR=/usr/local/etc/ugene --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400006 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> ugene-38.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.3.txz [main-amd64-default-job-12] Installing pkg-1.16.3... [main-amd64-default-job-12] Extracting pkg-1.16.3: .......... done ===> ugene-38.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of ugene-38.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2+ accepted by the user => ugeneunipro-ugene-38.0_GH0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://codeload.github.com/ugeneunipro/ugene/tar.gz/38.0?dummy=/ugeneunipro-ugene-38.0_GH0.tar.gz fetch: https://codeload.github.com/ugeneunipro/ugene/tar.gz/38.0?dummy=/ugeneunipro-ugene-38.0_GH0.tar.gz: size unknown fetch: https://codeload.github.com/ugeneunipro/ugene/tar.gz/38.0?dummy=/ugeneunipro-ugene-38.0_GH0.tar.gz: size of remote file is not known ugeneunipro-ugene-38.0_GH0.tar.gz 22 MB 7426 kBps 04s => Fetched file size mismatch (expected 23448730, actual 23446282) => Trying next site => Attempting to fetch http://distcache.FreeBSD.org/ports-distfiles/ugeneunipro-ugene-38.0_GH0.tar.gz fetch: http://distcache.FreeBSD.org/ports-distfiles/ugeneunipro-ugene-38.0_GH0.tar.gz: Not Found => Couldn't fetch it - please try to retrieve this => port manually into /portdistfiles/ and try again. *** Error code 1 Stop. make: stopped in /usr/ports/biology/ugene
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