From owner-svn-ports-all@freebsd.org Sun Mar 27 07:09:35 2016 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id C274DADF05B; Sun, 27 Mar 2016 07:09:35 +0000 (UTC) (envelope-from wen@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 841A3185E; Sun, 27 Mar 2016 07:09:35 +0000 (UTC) (envelope-from wen@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id u2R79YUT021362; Sun, 27 Mar 2016 07:09:34 GMT (envelope-from wen@FreeBSD.org) Received: (from wen@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id u2R79YHd021359; Sun, 27 Mar 2016 07:09:34 GMT (envelope-from wen@FreeBSD.org) Message-Id: <201603270709.u2R79YHd021359@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: wen set sender to wen@FreeBSD.org using -f From: Wen Heping Date: Sun, 27 Mar 2016 07:09:34 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r411978 - head/biology/libsbml X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.21 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 27 Mar 2016 07:09:35 -0000 Author: wen Date: Sun Mar 27 07:09:34 2016 New Revision: 411978 URL: https://svnweb.freebsd.org/changeset/ports/411978 Log: - Update to 5.12.0 Modified: head/biology/libsbml/Makefile head/biology/libsbml/distinfo head/biology/libsbml/pkg-plist Modified: head/biology/libsbml/Makefile ============================================================================== --- head/biology/libsbml/Makefile Sun Mar 27 05:04:07 2016 (r411977) +++ head/biology/libsbml/Makefile Sun Mar 27 07:09:34 2016 (r411978) @@ -2,8 +2,7 @@ # $FreeBSD$ PORTNAME= libsbml -PORTVERSION= 5.11.4 -PORTREVISION= 1 +PORTVERSION= 5.12.0 CATEGORIES= biology devel MASTER_SITES= SF/sbml/${PORTNAME}/${PORTVERSION}/stable DISTNAME= libSBML-${PORTVERSION}-core-src Modified: head/biology/libsbml/distinfo ============================================================================== --- head/biology/libsbml/distinfo Sun Mar 27 05:04:07 2016 (r411977) +++ head/biology/libsbml/distinfo Sun Mar 27 07:09:34 2016 (r411978) @@ -1,2 +1,2 @@ -SHA256 (libSBML-5.11.4-core-src.tar.gz) = d70684c547ad748c9ac4ca3e7663e3a563f26f7dd874c9bd582e71c0b9e592e2 -SIZE (libSBML-5.11.4-core-src.tar.gz) = 13129455 +SHA256 (libSBML-5.12.0-core-src.tar.gz) = 0cfa767a4d821faa89883cec1877857c8a823ab9e18626f2493c7b1b21cffe81 +SIZE (libSBML-5.12.0-core-src.tar.gz) = 13185253 Modified: head/biology/libsbml/pkg-plist ============================================================================== --- head/biology/libsbml/pkg-plist Sun Mar 27 05:04:07 2016 (r411977) +++ head/biology/libsbml/pkg-plist Sun Mar 27 07:09:34 2016 (r411978) @@ -81,6 +81,7 @@ include/sbml/conversion/SBMLFunctionDefi include/sbml/conversion/SBMLIdConverter.h include/sbml/conversion/SBMLInferUnitsConverter.h include/sbml/conversion/SBMLInitialAssignmentConverter.h +include/sbml/conversion/SBMLLevel1Version1Converter.h include/sbml/conversion/SBMLLevelVersionConverter.h include/sbml/conversion/SBMLLocalParameterConverter.h include/sbml/conversion/SBMLReactionConverter.h @@ -164,6 +165,7 @@ include/sbml/validator/SBMLExternalValid include/sbml/validator/SBMLInternalValidator.h include/sbml/validator/SBMLValidator.h include/sbml/validator/SBOConsistencyValidator.h +include/sbml/validator/StrictUnitConsistencyValidator.h include/sbml/validator/UnitConsistencyValidator.h include/sbml/validator/VConstraint.h include/sbml/validator/Validator.h @@ -201,7 +203,7 @@ include/sbml/xml/XercesTranscode.h lib/libsbml-static.a lib/libsbml.so lib/libsbml.so.5 -lib/libsbml.so.5.11.4 +lib/libsbml.so.5.12.0 libdata/pkgconfig/libsbml.pc %%PYTHON%%%%PYTHON_SITELIBDIR%%/libsbml.pth %%PYTHON%%%%PYTHON_SITELIBDIR%%/libsbml/_libsbml.so @@ -248,6 +250,7 @@ libdata/pkgconfig/libsbml.pc %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/callExternalValidator.cpp %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/convertReactions.cpp %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/convertSBML.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/convertToL1V1.cpp %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/createExampleSBML.cpp %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/echoSBML.cpp %%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/getAllElementsWithNotes.cpp