Date: Sun, 23 Aug 2020 04:14:45 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 121i386-default][misc/xgboost] Failed for xgboost-1.1.1 in build Message-ID: <202008230414.07N4Ej3a082025@beefy5.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/misc/xgboost/Makefile 538277 2020-06-09 05:31:47Z yuri $ Log URL: http://beefy5.nyi.freebsd.org/data/121i386-default/545799/logs/xgboost-1.1.1.log Build URL: http://beefy5.nyi.freebsd.org/build.html?mastername=121i386-default&build=545799 Log: =>> Building misc/xgboost build started at Sun Aug 23 04:13:16 UTC 2020 port directory: /usr/ports/misc/xgboost package name: xgboost-1.1.1 building for: FreeBSD 121i386-default-job-06 12.1-RELEASE-p8 FreeBSD 12.1-RELEASE-p8 i386 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/misc/xgboost/Makefile 538277 2020-06-09 05:31:47Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300094 Jail OSVERSION: 1201000 Job Id: 06 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1201000 UNAME_v=FreeBSD 12.1-RELEASE-p8 UNAME_r=12.1-RELEASE-p8 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/121i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/121i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=121i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/121i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for xgboost-1.1.1: OPENMP=off: Parallel processing support via OpenMP ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/misc/xgboost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/xgboost/work HOME=/wrkdirs/usr/ports/misc/xgboost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/xgboost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/misc/xgboost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/xgboost/work HOME=/wrkdirs/usr/ports/misc/xgboost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/xgboost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/misc/xgboost/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" /usr/local/lib/libdmlc.so -lexecinfo -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA=" install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/xgboost" EXAMPLESDIR="share/examples/xgboost" DATADIR="share/xgboost" WWWDIR="www/xgboost" ETCDIR="etc/xgboost" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/xgboost DOCSDIR=/usr/local/share/doc/xgboost EXAMPLESDIR=/usr/local/share/examples/xgboost WWWDIR=/usr/local/www/xgboost ETCDIR=/usr/local/etc/xgboost --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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[121i386-default-job-06] Extracting pkg-1.14.7: .......... done ===> xgboost-1.1.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of xgboost-1.1.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.1.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.1.1 for building => SHA256 Checksum OK for dmlc-xgboost-v1.1.1_GH0.tar.gz. => SHA256 Checksum OK for dmlc-rabit-4fb34a008db6437c84d1877635064e09a55c8553_GH0.tar.gz. => SHA256 Checksum OK for NVlabs-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by xgboost-1.1.1 for building ===> Extracting for xgboost-1.1.1 => SHA256 Checksum OK for dmlc-xgboost-v1.1.1_GH0.tar.gz. => SHA256 Checksum OK for dmlc-rabit-4fb34a008db6437c84d1877635064e09a55c8553_GH0.tar.gz. => SHA256 Checksum OK for NVlabs-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for xgboost-1.1.1 ===> Applying FreeBSD patches for xgboost-1.1.1 from /usr/ports/misc/xgboost/files =========================================================================== =======================<phase: build-depends >============================ ===> xgboost-1.1.1 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.18.1.txz [121i386-default-job-06] Installing cmake-3.18.1... [121i386-default-job-06] `-- Installing curl-7.72.0... [121i386-default-job-06] | `-- Installing ca_root_nss-3.55... [121i386-default-job-06] | `-- Extracting ca_root_nss-3.55: ........ done [121i386-default-job-06] | `-- Installing libnghttp2-1.41.0... [121i386-default-job-06] | `-- Extracting libnghttp2-1.41.0: .......... done [121i386-default-job-06] `-- Extracting curl-7.72.0: .......... done [121i386-default-job-06] `-- Installing expat-2.2.8... [121i386-default-job-06] `-- Extracting expat-2.2.8: .......... done [121i386-default-job-06] `-- Installing jsoncpp-1.9.3... [121i386-default-job-06] `-- Extracting jsoncpp-1.9.3: .......... done [121i386-default-job-06] `-- Installing libarchive-3.4.3,1... [121i386-default-job-06] | `-- Installing liblz4-1.9.2_1,1... [121i386-default-job-06] | `-- Extracting liblz4-1.9.2_1,1: .......... done [121i386-default-job-06] | `-- Installing lzo2-2.10_1... [121i386-default-job-06] | `-- Extracting lzo2-2.10_1: .......... done [121i386-default-job-06] `-- Extracting libarchive-3.4.3,1: .......... done [121i386-default-job-06] `-- Installing libuv-1.38.1... [121i386-default-job-06] `-- Extracting libuv-1.38.1: .......... done [121i386-default-job-06] `-- Installing rhash-1.3.9... [121i386-default-job-06] | `-- Installing gettext-runtime-0.21... [121i386-default-job-06] | | `-- Installing indexinfo-0.3.1... [121i386-default-job-06] | | `-- Extracting indexinfo-0.3.1: .... done [121i386-default-job-06] | `-- Extracting gettext-runtime-0.21: .......... done [121i386-default-job-06] `-- Extracting rhash-1.3.9: .......... done [121i386-default-job-06] Extracting cmake-3.18.1: .......... done ===== Message from ca_root_nss-3.55: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> xgboost-1.1.1 depends on file: /usr/local/bin/cmake - found ===> Returning to build of xgboost-1.1.1 ===> xgboost-1.1.1 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.10.0,2.txz [121i386-default-job-06] Installing ninja-1.10.0,2... [121i386-default-job-06] `-- Installing python37-3.7.8_1... [121i386-default-job-06] | `-- Installing libffi-3.3_1... [121i386-default-job-06] | `-- Extracting libffi-3.3_1: .......... done [121i386-default-job-06] | `-- Installing readline-8.0.4... [121i386-default-job-06] | `-- Extracting readline-8.0.4: .......... done [121i386-default-job-06] `-- Extracting python37-3.7.8_1: .......... done [121i386-default-job-06] Extracting ninja-1.10.0,2: ........ done ===== Message from python37-3.7.8_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===> xgboost-1.1.1 depends on executable: ninja - found ===> Returning to build of xgboost-1.1.1 =========================================================================== =======================<phase: lib-depends >============================ ===> xgboost-1.1.1 depends on shared library: libdmlc.so - not found ===> Installing existing package /packages/All/dmlc-core-0.3.123.txz [121i386-default-job-06] Installing dmlc-core-0.3.123... [121i386-default-job-06] Extracting dmlc-core-0.3.123: .......... done ===> xgboost-1.1.1 depends on shared library: libdmlc.so - found (/usr/local/lib/libdmlc.so) ===> Returning to build of xgboost-1.1.1 =========================================================================== =======================<phase: configure >============================ ===> Configuring for xgboost-1.1.1 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/misc/xgboost/work/.build -- The CXX compiler identification is Clang 8.0.1 -- The C compiler identification is Clang 8.0.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMake version 3.18.1 -- Performing Test XGBOOST_MM_PREFETCH_PRESENT -- Performing Test XGBOOST_MM_PREFETCH_PRESENT - Success -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT - Success -- xgboost VERSION: 1.1.1 -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE DMLC_ROOT point to /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/rabit/../dmlc-core -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE -- Build files have been written to: /wrkdirs/usr/ports/misc/xgboost/work/.build =========================================================================== =======================<phase: build >============================ ===> Building for xgboost-1.1.1 [1/77] /usr/bin/c++ -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/include 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-I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/rabit/../dmlc-core/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -pthread -std=gnu++11 -MD -MT rabit/CMakeFiles/rabit_mock_static.dir/src/c_api.cc.o -MF rabit/CMakeFiles/rabit_mock_static.dir/src/c_api.cc.o.d -o rabit/CMakeFiles/rabit_mock_static.dir/src/c_api.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/rabit/src/c_api.cc [6/77] : && /usr/local/bin/cmake -E rm -f rabit/librabit_mock_static.a && /usr/bin/ar qc rabit/librabit_mock_static.a rabit/CMakeFiles/rabit_mock_static.dir/src/allreduce_base.cc.o rabit/CMakeFiles/rabit_mock_static.dir/src/allreduce_robust.cc.o rabit/CMakeFiles/rabit_mock_static.dir/src/engine_mock.cc.o rabit/CMakeFiles/rabit_mock_static.dir/src/c_api.cc.o && /usr/bin/ranlib rabit/librabit_mock_static.a && : 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/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/src/c_api/c_api.cc /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/src/c_api/c_api.cc:184:60: error: non-constant-expression cannot be narrowed from type 'xgboost::bst_ulong' (aka 'unsigned long long') to 'xgboost::common::Span::index_type' (aka 'unsigned int') in initializer list [-Wc++11-narrowing] *out = new std::shared_ptr<DMatrix>(dmat->Slice({idxset, len})); ^~~ /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.1.1/src/c_api/c_api.cc:184:60: note: insert an explicit cast to silence this issue *out = new std::shared_ptr<DMatrix>(dmat->Slice({idxset, len})); ^~~ static_cast<index_type>( ) 1 error generated. ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/misc/xgboost
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