Date: Thu, 16 Jun 2022 15:14:13 GMT From: Po-Chuan Hsieh <sunpoet@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: f791baebff9d - main - science/hdf5: Update to 1.10.9 Message-ID: <202206161514.25GFEDBO011276@gitrepo.freebsd.org>
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The branch main has been updated by sunpoet: URL: https://cgit.FreeBSD.org/ports/commit/?id=f791baebff9d739e1b9c7d1ab963ecf7406a705d commit f791baebff9d739e1b9c7d1ab963ecf7406a705d Author: Po-Chuan Hsieh <sunpoet@FreeBSD.org> AuthorDate: 2022-06-16 15:09:41 +0000 Commit: Po-Chuan Hsieh <sunpoet@FreeBSD.org> CommitDate: 2022-06-16 15:13:02 +0000 science/hdf5: Update to 1.10.9 Changes: https://portal.hdfgroup.org/display/support/HDF5+1.10.7 https://portal.hdfgroup.org/display/support/HDF5+1.10.8 https://portal.hdfgroup.org/display/support/HDF5+1.10.9 --- science/hdf5/Makefile | 29 ++++++------ science/hdf5/distinfo | 6 +-- science/hdf5/pkg-plist | 122 ++++++++++++++++++++++++++++++++++++++++++++++--- 3 files changed, 132 insertions(+), 25 deletions(-) diff --git a/science/hdf5/Makefile b/science/hdf5/Makefile index 8e0133176a16..c19e33a22424 100644 --- a/science/hdf5/Makefile +++ b/science/hdf5/Makefile @@ -1,8 +1,7 @@ # Created by: ijliao PORTNAME= hdf5 -PORTVERSION= 1.10.6 -PORTREVISION= 1 +PORTVERSION= 1.10.9 PORTEPOCH= 1 CATEGORIES= science archivers graphics MASTER_SITES= https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \ @@ -14,27 +13,27 @@ COMMENT= Hierarchical Data Format library (from NCSA) LICENSE= BSD4CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING -CONFLICTS_INSTALL= hdf-4.[0-9]* hdf5-1.6.[0-9]* - -OPTIONS_DEFINE= DEBUG EXAMPLES FORTRAN SZIP -OPTIONS_RADIO= SUPPORT -OPTIONS_RADIO_SUPPORT= CXX PARALLEL -OPTIONS_DEFAULT=CXX SZIP -OPTIONS_SUB= yes -PARALLEL_DESC= Parallel support - USES= compiler:c11 cpe libtool localbase tar:bzip2 -CPE_VENDOR= hdfgroup CONFIGURE_ARGS= --enable-hl \ --enable-instrument \ - --enable-strict-format-checks + --enable-strict-format-checks \ + --with-default-api-version=v110 GNU_CONFIGURE= yes INSTALL_TARGET= install-strip MAKE_JOBS_UNSAFE= yes TEST_TARGET= check USE_LDCONFIG= yes -PORTEXAMPLES= * +CONFLICTS_INSTALL= hdf + +CPE_VENDOR= hdfgroup + +OPTIONS_DEFINE= DEBUG EXAMPLES FORTRAN SZIP +OPTIONS_RADIO= SUPPORT +OPTIONS_RADIO_SUPPORT= CXX PARALLEL +OPTIONS_DEFAULT=CXX SZIP +OPTIONS_SUB= yes +PARALLEL_DESC= Parallel support CXX_CONFIGURE_ENABLE= cxx DEBUG_CONFIGURE_OFF= --enable-build-mode=production @@ -49,10 +48,10 @@ SZIP_CONFIGURE_ON= --with-szlib=${LOCALBASE} SZIP_LIB_DEPENDS= libsz.so:science/libaec post-patch: + @${REINPLACE_CMD} -e 's|hdf5_examples|examples/hdf5|' ${WRKSRC}/configure @${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags @${REINPLACE_CMD} \ -e '/LD_LIBRARY_PATH/ s|^|#|' \ - -e 's|/share/hdf5_examples|/${EXAMPLESDIR_REL}|' \ -e 's|(INSTALL)|(INSTALL_DATA)|' \ `${FIND} ${WRKSRC} -regex '.*/examples/Makefile.in'` @${REINPLACE_CMD} -e 's|\[ -a|\[ -f|g' `${FIND} ${WRKSRC} -name \*.sh\*` diff --git a/science/hdf5/distinfo b/science/hdf5/distinfo index d0018afb889b..8d8f933aa991 100644 --- a/science/hdf5/distinfo +++ b/science/hdf5/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1577693899 -SHA256 (hdf5-1.10.6.tar.bz2) = 09d6301901685201bb272a73e21c98f2bf7e044765107200b01089104a47c3bd -SIZE (hdf5-1.10.6.tar.bz2) = 8813699 +TIMESTAMP = 1655148219 +SHA256 (hdf5-1.10.9.tar.bz2) = 00c4be7096f36fdcafa4f974e126c6c1412428e38ebc7b181d907459e781f191 +SIZE (hdf5-1.10.9.tar.bz2) = 10703325 diff --git a/science/hdf5/pkg-plist b/science/hdf5/pkg-plist index f89773072942..6fbf249db864 100644 --- a/science/hdf5/pkg-plist +++ b/science/hdf5/pkg-plist @@ -1,6 +1,6 @@ bin/gif2h5 -bin/h52gif %%CXX%%bin/h5c++ +bin/h52gif %%CXX%%bin/h5cc bin/h5clear bin/h5copy @@ -53,12 +53,14 @@ include/H5FDdirect.h include/H5FDfamily.h include/H5FDhdfs.h include/H5FDlog.h +include/H5FDmirror.h include/H5FDmpi.h include/H5FDmpio.h include/H5FDmulti.h include/H5FDpublic.h include/H5FDros3.h include/H5FDsec2.h +include/H5FDsplitter.h include/H5FDstdio.h include/H5FDwindows.h %%CXX%%include/H5FaccProp.h @@ -136,26 +138,132 @@ lib/libhdf5.a lib/libhdf5.settings lib/libhdf5.so lib/libhdf5.so.103 -lib/libhdf5.so.103.2.0 +lib/libhdf5.so.103.3.2 %%CXX%%lib/libhdf5_cpp.a %%CXX%%lib/libhdf5_cpp.so %%CXX%%lib/libhdf5_cpp.so.103 -%%CXX%%lib/libhdf5_cpp.so.103.2.0 +%%CXX%%lib/libhdf5_cpp.so.103.4.1 %%FORTRAN%%lib/libhdf5_fortran.a %%FORTRAN%%lib/libhdf5_fortran.so %%FORTRAN%%lib/libhdf5_fortran.so.102 -%%FORTRAN%%lib/libhdf5_fortran.so.102.0.1 +%%FORTRAN%%lib/libhdf5_fortran.so.102.1.2 lib/libhdf5_hl.a lib/libhdf5_hl.so lib/libhdf5_hl.so.100 -lib/libhdf5_hl.so.100.1.3 +lib/libhdf5_hl.so.100.1.6 %%CXX%%lib/libhdf5_hl_cpp.a %%CXX%%lib/libhdf5_hl_cpp.so %%CXX%%lib/libhdf5_hl_cpp.so.100 -%%CXX%%lib/libhdf5_hl_cpp.so.100.1.4 +%%CXX%%lib/libhdf5_hl_cpp.so.100.1.7 %%FORTRAN%%lib/libhdf5_hl_fortran.a %%FORTRAN%%lib/libhdf5_hl_fortran.so %%FORTRAN%%lib/libhdf5hl_fortran.a %%FORTRAN%%lib/libhdf5hl_fortran.so %%FORTRAN%%lib/libhdf5hl_fortran.so.100 -%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.5 +%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.8 +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/README +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/chunks.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/compound.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/create.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/extend_ds.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5group.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_cmprss.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtatt.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtdat.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrp.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrpar.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrpd.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_extend.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_rdwt.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_subset.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/readdata.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/run-c++-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/writedata.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_attribute.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_chunk_read.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_cmprss.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_compound.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_crtatt.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_crtdat.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_crtgrp.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_crtgrpar.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_crtgrpd.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_debug_trace.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_drivers.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_elink_unix2win.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_extend.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_extend_write.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_extlink.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_group.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_mount.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_rdwt.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_read.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_ref2reg.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_reference.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_select.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_shared_mesg.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_subset.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-eiger.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-exc.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-exclim.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-percival-unlim-maxmin.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-percival-unlim.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-percival.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds-simpleIO.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_vds.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/h5_write.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/ph5_filtered_writes.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/ph5_filtered_writes_no_sel.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/ph5example.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c/run-c-ex.sh +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/compound.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/compound_complex_fortran2003.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/compound_fortran2003.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_cmprss.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_crtatt.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_crtdat.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_crtgrp.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_crtgrpar.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_crtgrpd.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_extend.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_rdwt.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/h5_subset.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/hyperslab.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/mountexample.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/nested_derived_type.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/ph5example.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/refobjexample.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/refregexample.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/run-fortran-ex.sh +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/rwdset_fortran2003.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/fortran/selectele.f90 +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c++/ptExampleFL.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c++/run-hlc++-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_ds1.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_image1.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_image2.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite1.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite2.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_lite3.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_01.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_02.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_03.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_04.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_05.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_06.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_07.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_08.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_09.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_10.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_11.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ex_table_12.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/image24pixel.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/image8.txt +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/pal_rgb.h +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/ptExampleFL.c +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/c/run-hlc-ex.sh +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/ex_ds1.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/exlite.f90 +%%FORTRAN%%%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/fortran/run-hlfortran-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hl/run-hl-ex.sh +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/run-all-ex.sh
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