From owner-svn-ports-head@freebsd.org Fri Apr 22 16:27:26 2016 Return-Path: Delivered-To: svn-ports-head@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id A55D9B199C6; Fri, 22 Apr 2016 16:27:26 +0000 (UTC) (envelope-from pi@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 72C2D16B5; Fri, 22 Apr 2016 16:27:26 +0000 (UTC) (envelope-from pi@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id u3MGRPla091733; Fri, 22 Apr 2016 16:27:25 GMT (envelope-from pi@FreeBSD.org) Received: (from pi@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id u3MGRPD9091731; Fri, 22 Apr 2016 16:27:25 GMT (envelope-from pi@FreeBSD.org) Message-Id: <201604221627.u3MGRPD9091731@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: pi set sender to pi@FreeBSD.org using -f From: Kurt Jaeger Date: Fri, 22 Apr 2016 16:27:25 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r413787 - head/biology/seqtools X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.21 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 22 Apr 2016 16:27:26 -0000 Author: pi Date: Fri Apr 22 16:27:25 2016 New Revision: 413787 URL: https://svnweb.freebsd.org/changeset/ports/413787 Log: biology/seqtools: 4.41.1 -> 4.42.1 - fixes build on 9.x - Added a feedback box to show the read depth at the selected coord. Hover over this box to see the specific base support (i.e. the number of A/C/G/Ts). Modified: head/biology/seqtools/Makefile head/biology/seqtools/distinfo Modified: head/biology/seqtools/Makefile ============================================================================== --- head/biology/seqtools/Makefile Fri Apr 22 16:07:49 2016 (r413786) +++ head/biology/seqtools/Makefile Fri Apr 22 16:27:25 2016 (r413787) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= seqtools -PORTVERSION= 4.41.1 +PORTVERSION= 4.42.1 CATEGORIES= biology MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/ @@ -13,9 +13,9 @@ LICENSE= GPLv3 LIB_DEPENDS= libcurl.so:ftp/curl \ libsqlite3.so:databases/sqlite3 -USES= execinfo libtool pkgconfig +USES= compiler:c++14-lang execinfo libtool pkgconfig GNU_CONFIGURE= yes -USE_GCC= any +#USE_GCC= any USE_GNOME= gtk20 CFLAGS+= -I${LOCALBASE}/include LDFLAGS+= -L${LOCALBASE}/lib -lexecinfo -lcurl -lsqlite3 -lm Modified: head/biology/seqtools/distinfo ============================================================================== --- head/biology/seqtools/distinfo Fri Apr 22 16:07:49 2016 (r413786) +++ head/biology/seqtools/distinfo Fri Apr 22 16:27:25 2016 (r413787) @@ -1,2 +1,2 @@ -SHA256 (seqtools-4.41.1.tar.gz) = a11168bc1f9176081dba7021fd98c8b6eb1e05806d9b5b7809303c0b067aed4d -SIZE (seqtools-4.41.1.tar.gz) = 5906920 +SHA256 (seqtools-4.42.1.tar.gz) = 5b3f7f5f213f47d72c7b2070ff94d0e5ca31a5be8b4558492d45e7dbbfad774b +SIZE (seqtools-4.42.1.tar.gz) = 5847308