From owner-svn-ports-all@freebsd.org Wed Jul 8 10:37:08 2020 Return-Path: Delivered-To: svn-ports-all@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 6AC9E35E7D3; Wed, 8 Jul 2020 10:37:08 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4B1wjJ27jjz3cVS; Wed, 8 Jul 2020 10:37:08 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 292E61EF9F; Wed, 8 Jul 2020 10:37:08 +0000 (UTC) (envelope-from pkubaj@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 068Ab8Wi046900; Wed, 8 Jul 2020 10:37:08 GMT (envelope-from pkubaj@FreeBSD.org) Received: (from pkubaj@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 068Ab8qV046899; Wed, 8 Jul 2020 10:37:08 GMT (envelope-from pkubaj@FreeBSD.org) Message-Id: <202007081037.068Ab8qV046899@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: pkubaj set sender to pkubaj@FreeBSD.org using -f From: Piotr Kubaj Date: Wed, 8 Jul 2020 10:37:07 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r541482 - head/biology/cufflinks X-SVN-Group: ports-head X-SVN-Commit-Author: pkubaj X-SVN-Commit-Paths: head/biology/cufflinks X-SVN-Commit-Revision: 541482 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.33 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 08 Jul 2020 10:37:08 -0000 Author: pkubaj Date: Wed Jul 8 10:37:07 2020 New Revision: 541482 URL: https://svnweb.freebsd.org/changeset/ports/541482 Log: biology/cufflinks: fix build on GCC architectures Using Boost requires modern compiler. MFH: 2020Q3 (fix build blanket) Modified: head/biology/cufflinks/Makefile Modified: head/biology/cufflinks/Makefile ============================================================================== --- head/biology/cufflinks/Makefile Wed Jul 8 10:25:10 2020 (r541481) +++ head/biology/cufflinks/Makefile Wed Jul 8 10:37:07 2020 (r541482) @@ -18,7 +18,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE LIB_DEPENDS= libboost_system.so:devel/boost-libs \ libhts.so:biology/htslib -USES= autoreconf eigen:3 gmake python shebangfix +USES= autoreconf compiler:c++11-lang eigen:3 gmake python shebangfix SHEBANG_FILES= src/cuffmerge GNU_CONFIGURE= yes USE_GITHUB= yes