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Date:      Fri, 7 May 2021 14:24:58 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 130powerpc64-quarterly][biology/py-scikit-bio] Failed for py37-scikit-bio-0.5.6 in build
Message-ID:  <202105071424.147EOwvT063301@pylon.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        http://pylon.nyi.freebsd.org/data/130powerpc64-quarterly/61257645fee1/logs/py37-scikit-bio-0.5.6.log
Build URL:      http://pylon.nyi.freebsd.org/build.html?mastername=130powerpc64-quarterly&build=61257645fee1
Log:

=>> Building biology/py-scikit-bio
build started at Fri May  7 14:23:12 UTC 2021
port directory: /usr/ports/biology/py-scikit-bio
package name: py37-scikit-bio-0.5.6
building for: FreeBSD 130powerpc64-quarterly-job-09 13.0-RELEASE FreeBSD 13.0-RELEASE powerpc
maintained by: yuri@FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-8-gaf08dbda
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Job Id: 09

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yuri@FreeBSD.org
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=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py37-scikit-bio-0.5.6 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.16.3.txz
[130powerpc64-quarterly-job-09] Installing pkg-1.16.3...
[130powerpc64-quarterly-job-09] Extracting pkg-1.16.3: .......... done
===>   py37-scikit-bio-0.5.6 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py37-scikit-bio-0.5.6
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py37-scikit-bio-0.5.6 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py37-scikit-bio-0.5.6 for building
=> SHA256 Checksum OK for scikit-bio-0.5.6.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py37-scikit-bio-0.5.6 for building
===>  Extracting for py37-scikit-bio-0.5.6
=> SHA256 Checksum OK for scikit-bio-0.5.6.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py37-scikit-bio-0.5.6
===========================================================================
=======================<phase: build-depends  >============================
===>   py37-scikit-bio-0.5.6 depends on package: py37-numpy>=1.16,1<1.20,1 - not found
===>   Installing existing package /packages/All/py37-numpy-1.16.6,1.txz
[130powerpc64-quarterly-job-09] Installing py37-numpy-1.16.6,1...
[130powerpc64-quarterly-job-09] `-- Installing gcc10-10.2.0_1...
[130powerpc64-quarterly-job-09] |   `-- Installing binutils-2.33.1_4,1...
[130powerpc64-quarterly-job-09] |   | `-- Installing gettext-runtime-0.21...
[130powerpc64-quarterly-job-09] |   |   `-- Installing indexinfo-0.3.1...
[130powerpc64-quarterly-job-09] |   |   `-- Extracting indexinfo-0.3.1: .... done
[130powerpc64-quarterly-job-09] |   | `-- Extracting gettext-runtime-0.21: .......... done
[130powerpc64-quarterly-job-09] |   `-- Extracting binutils-2.33.1_4,1: .......... done
[130powerpc64-quarterly-job-09] |   `-- Installing gmp-6.2.1...
[130powerpc64-quarterly-job-09] |   `-- Extracting gmp-6.2.1: .......... done
[130powerpc64-quarterly-job-09] |   `-- Installing mpc-1.2.0...
[130powerpc64-quarterly-job-09] |   | `-- Installing mpfr-4.1.0...
[130powerpc64-quarterly-job-09] |   | `-- Extracting mpfr-4.1.0: .......... done
[130powerpc64-quarterly-job-09] |   `-- Extracting mpc-1.2.0: ......... done
[130powerpc64-quarterly-job-09] `-- Extracting gcc10-10.2.0_1: .......... done
[130powerpc64-quarterly-job-09] `-- Installing openblas-0.3.13_1,1...
[130powerpc64-quarterly-job-09] `-- Extracting openblas-0.3.13_1,1: .......... done
<snip>
 2141 |   r = vec_perm (a, a, (__vector unsigned char)pmask);
      |                       ~        ^~~~~~~~~
      |                                )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2141:47: error: expected ')' before 'pmask'
 2141 |   r = vec_perm (a, a, (__vector unsigned char)pmask);
      |                                               ^~~~~
      |                                               )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_shuffle_epi32':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2160:9: error: expected ';' before 't'
 2160 |   __v4su t;
      |         ^~
      |         ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2162:3: error: 't' undeclared (first use in this function); did you mean 'tm'?
 2162 |   t[0] = permute_selectors[element_selector_10];
      |   ^
      |   tm
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2166:37: error: expected ')' before '__A'
 2166 |   return (__m128i)vec_perm ((__v4si) __A, (__v4si)__A, (__vector unsigned char)t);
      |                                     ^~~~
      |                                     )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2166:29: error: incompatible type for argument 1 of '__builtin_vec_perm'
 2166 |   return (__m128i)vec_perm ((__v4si) __A, (__v4si)__A, (__vector unsigned char)t);
      |                             ^~~~~~~~
      |                             |
      |                             int
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2166:29: note: expected '__vector(4) int' but argument is of type 'int'
In file included from /usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:62,
                 from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2166:19: error: too few arguments to function '__builtin_vec_perm'
 2166 |   return (__m128i)vec_perm ((__v4si) __A, (__v4si)__A, (__vector unsigned char)t);
      |                   ^~~~~~~~
In file included from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_maskmoveu_si128':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2172:9: error: expected ';' before 'hibit'
 2172 |   __v2du hibit = { 0x7f7f7f7f7f7f7f7fUL, 0x7f7f7f7f7f7f7f7fUL};
      |         ^~~~~~
      |         ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2173:10: error: expected ';' before 'mask'
 2173 |   __v16qu mask, tmp;
      |          ^~~~~
      |          ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2176:3: error: 'tmp' undeclared (first use in this function); did you mean 'tm'?
 2176 |   tmp = (__v16qu)_mm_loadu_si128(p);
      |   ^~~
      |   tm
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2176:18: error: expected ';' before '_mm_loadu_si128'
 2176 |   tmp = (__v16qu)_mm_loadu_si128(p);
      |                  ^~~~~~~~~~~~~~~
      |                  ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2177:3: error: 'mask' undeclared (first use in this function); did you mean 'umask'?
 2177 |   mask = (__v16qu)vec_cmpgt ((__v16qu)__B, (__v16qu)hibit);
      |   ^~~~
      |   umask
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2177:19: error: expected ';' before '__builtin_vec_cmpgt'
 2177 |   mask = (__v16qu)vec_cmpgt ((__v16qu)__B, (__v16qu)hibit);
      |                   ^
      |                   ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2178:32: error: expected ')' before '__A'
 2178 |   tmp = vec_sel (tmp, (__v16qu)__A, mask);
      |                                ^~~
      |                                )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_avg_epu8':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2185:38: error: expected ')' before '__A'
 2185 |   return (__m128i) vec_avg ((__v16qu)__A, (__v16qu)__B);
      |                                      ^~~
      |                                      )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2185:29: error: incompatible type for argument 1 of '__builtin_vec_avg'
 2185 |   return (__m128i) vec_avg ((__v16qu)__A, (__v16qu)__B);
      |                             ^~~~~~~~~
      |                             |
      |                             unsigned char
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2185:29: note: expected '__vector(4) int' but argument is of type 'unsigned char'
In file included from /usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:62,
                 from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2185:20: error: too few arguments to function '__builtin_vec_avg'
 2185 |   return (__m128i) vec_avg ((__v16qu)__A, (__v16qu)__B);
      |                    ^~~~~~~
In file included from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_avg_epu16':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2191:37: error: expected ')' before '__A'
 2191 |   return (__m128i) vec_avg ((__v8hu)__A, (__v8hu)__B);
      |                                     ^~~
      |                                     )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2191:29: error: incompatible type for argument 1 of '__builtin_vec_avg'
 2191 |   return (__m128i) vec_avg ((__v8hu)__A, (__v8hu)__B);
      |                             ^~~~~~~~
      |                             |
      |                             short unsigned int
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2191:29: note: expected '__vector(4) int' but argument is of type 'short unsigned int'
In file included from /usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:62,
                 from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2191:20: error: too few arguments to function '__builtin_vec_avg'
 2191 |   return (__m128i) vec_avg ((__v8hu)__A, (__v8hu)__B);
      |                    ^~~~~~~
In file included from skbio/alignment/_lib/ssw.h:17,
                 from skbio/alignment/_ssw_wrapper.c:626:
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_sad_epu8':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2198:10: error: expected ';' before 'a'
 2198 |   __v16qu a, b;
      |          ^~
      |          ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2199:10: error: expected ';' before 'vmin'
 2199 |   __v16qu vmin, vmax, vabsdiff;
      |          ^~~~~
      |          ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2200:9: error: expected ';' before 'vsum'
 2200 |   __v4si vsum;
      |         ^~~~~
      |         ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2201:16: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'zero'
 2201 |   const __v4su zero = { 0, 0, 0, 0 };
      |                ^~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2201:16: error: 'zero' undeclared (first use in this function); did you mean 'bzero'?
 2201 |   const __v4su zero = { 0, 0, 0, 0 };
      |                ^~~~
      |                bzero
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2201:23: error: expected expression before '{' token
 2201 |   const __v4su zero = { 0, 0, 0, 0 };
      |                       ^
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2202:9: error: expected ';' before 'result'
 2202 |   __v4si result;
      |         ^~~~~~~
      |         ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2204:3: error: 'a' undeclared (first use in this function)
 2204 |   a = (__v16qu) __A;
      |   ^
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2204:16: error: expected ';' before '__A'
 2204 |   a = (__v16qu) __A;
      |                ^~~~
      |                ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2205:3: error: 'b' undeclared (first use in this function)
 2205 |   b = (__v16qu) __B;
      |   ^
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2205:16: error: expected ';' before '__B'
 2205 |   b = (__v16qu) __B;
      |                ^~~~
      |                ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2206:3: error: 'vmin' undeclared (first use in this function); did you mean 'fmin'?
 2206 |   vmin = vec_min (a, b);
      |   ^~~~
      |   fmin
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2207:3: error: 'vmax' undeclared (first use in this function); did you mean 'fmax'?
 2207 |   vmax = vec_max (a, b);
      |   ^~~~
      |   fmax
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2208:3: error: 'vabsdiff' undeclared (first use in this function)
 2208 |   vabsdiff = vec_sub (vmax, vmin);
      |   ^~~~~~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2210:3: error: 'vsum' undeclared (first use in this function)
 2210 |   vsum = (__vector signed int) vec_sum4s (vabsdiff, zero);
      |   ^~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2210:11: error: '__vector' undeclared (first use in this function); did you mean 'vector'?
 2210 |   vsum = (__vector signed int) vec_sum4s (vabsdiff, zero);
      |           ^~~~~~~~
      |           vector
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2210:19: error: expected ')' before 'signed'
 2210 |   vsum = (__vector signed int) vec_sum4s (vabsdiff, zero);
      |          ~        ^~~~~~~
      |                   )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2210:31: error: expected ';' before '__builtin_vec_sum4s'
 2210 |   vsum = (__vector signed int) vec_sum4s (vabsdiff, zero);
      |                               ^
      |                               ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2212:3: error: 'result' undeclared (first use in this function)
 2212 |   result = vec_sum2s (vsum, (__vector signed int) zero);
      |   ^~~~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2212:38: error: expected ')' before 'signed'
 2212 |   result = vec_sum2s (vsum, (__vector signed int) zero);
      |                             ~        ^~~~~~~
      |                                      )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2212:50: error: expected ')' before 'zero'
 2212 |   result = vec_sum2s (vsum, (__vector signed int) zero);
      |                                                  ^~~~~
      |                                                  )
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_cvtsi64_si128':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2310:3: error: cannot convert a value of type 'long long int' to vector type '__vector(2) long long int' which has different size
 2310 |   return __extension__ (__m128i)(__v2di){ __A, 0LL };
      |   ^~~~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2310:41: error: expected ';' before '{' token
 2310 |   return __extension__ (__m128i)(__v2di){ __A, 0LL };
      |                                         ^
      |                                         ;
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h: In function '_mm_cvtsi64x_si128':
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2317:3: error: cannot convert a value of type 'long long int' to vector type '__vector(2) long long int' which has different size
 2317 |   return __extension__ (__m128i)(__v2di){ __A, 0LL };
      |   ^~~~~~
/usr/local/lib/gcc10/gcc/powerpc64-portbld-freebsd13.0/10.2.0/include/emmintrin.h:2317:41: error: expected ';' before '{' token
 2317 |   return __extension__ (__m128i)(__v2di){ __A, 0LL };
      |                                         ^
      |                                         ;
error: command 'gcc10' failed with exit status 1
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/py-scikit-bio



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