Date: Sat, 10 Jul 2004 00:00:16 +0900 From: KATO Tsuguru <tkato432@yahoo.com> To: FreeBSD-gnats-submit@FreeBSD.org Subject: ports/68861: Update port: biology/rasmol to 2.7.2.1.1 Message-ID: <20040710000016.4364f8a8.tkato432@yahoo.com> Resent-Message-ID: <200407091510.i69FAFU0088181@freefall.freebsd.org>
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>Number: 68861 >Category: ports >Synopsis: Update port: biology/rasmol to 2.7.2.1.1 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Fri Jul 09 15:10:15 GMT 2004 >Closed-Date: >Last-Modified: >Originator: KATO Tsuguru >Release: FreeBSD 4.10-RELEASE-p2 i386 >Organization: >Environment: >Description: - Update to version 2.7.2.1.1 Remove file: pkg-plist >How-To-Repeat: >Fix: diff -urN /usr/ports/biology/rasmol/Makefile biology/rasmol/Makefile --- /usr/ports/biology/rasmol/Makefile Fri Jun 18 22:04:08 2004 +++ biology/rasmol/Makefile Tue Jul 6 00:50:31 2004 @@ -6,32 +6,37 @@ # PORTNAME= rasmol -PORTVERSION= 2.7.2 -PORTREVISION= 1 +PORTVERSION= 2.7.2.1.1 CATEGORIES= biology -MASTER_SITES= ftp://ftp.bernstein-plus-sons.com/software/RasMol_2.7.2/ -DISTNAME= RasMol +MASTER_SITES= ftp://ftp.bernstein-plus-sons.com/software/ +DISTNAME= RasMol_${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Fast Molecular Visualization Program -WRKSRC= ${WRKDIR}/RasMol_2.7.2/src +WRKSRC= ${WRKDIR}/RasMol_${PORTVERSION}/src USE_X_PREFIX= yes - -.include <bsd.port.pre.mk> - USE_IMAKE= yes +MANCOMPRESSED= no +XFREE86_HTML_MAN= no MAN1= rasmol.1 +PLIST_FILES= bin/rasmol bin/rasmol-16 bin/rasmol-32 bin/rasmol-8 \ + lib/X11/rasmol/1crn.pdb lib/X11/rasmol/3cro.pdb \ + lib/X11/rasmol/rasmol.hlp +PLIST_DIRS= lib/X11/rasmol + +.include <bsd.port.pre.mk> + do-build: ${SETENV} ${SCRIPTS_ENV} ${SH} ${SCRIPTDIR}/build_viewer do-install: ${INSTALL_PROGRAM} ${WRKSRC}/rasmol-* ${PREFIX}/bin ${INSTALL_SCRIPT} ${FILESDIR}/rasmol ${PREFIX}/bin - ${INSTALL_MAN} ${WRKSRC}/rasmol.man ${PREFIX}/man/man1/rasmol.1 + ${INSTALL_MAN} ${WRKSRC}/rasmol.man ${MANPREFIX}/man/man1/rasmol.1 ${MKDIR} ${PREFIX}/lib/X11/rasmol ${INSTALL_DATA} ${WRKSRC}/rasmol.hlp ${PREFIX}/lib/X11/rasmol ${INSTALL_DATA} ${WRKSRC}/../data/1crn.pdb ${PREFIX}/lib/X11/rasmol diff -urN /usr/ports/biology/rasmol/distinfo biology/rasmol/distinfo --- /usr/ports/biology/rasmol/distinfo Wed Jan 28 18:45:35 2004 +++ biology/rasmol/distinfo Tue Jul 6 00:33:33 2004 @@ -1,2 +1,2 @@ -MD5 (RasMol.tar.gz) = 03550d60f85725b032c4eab1a9311d37 -SIZE (RasMol.tar.gz) = 3671619 +MD5 (RasMol_2.7.2.1.1.tar.gz) = c75f1a30030b9a0ed0b55a076b1f235c +SIZE (RasMol_2.7.2.1.1.tar.gz) = 4845420 diff -urN /usr/ports/biology/rasmol/files/patch-aa biology/rasmol/files/patch-aa --- /usr/ports/biology/rasmol/files/patch-aa Fri Sep 10 16:39:26 1999 +++ biology/rasmol/files/patch-aa Tue Jul 6 00:39:53 2004 @@ -1,24 +1,20 @@ ---- Imakefile.orig Tue Jul 6 07:48:28 1999 -+++ Imakefile Mon Aug 23 11:36:22 1999 -@@ -64,7 +64,7 @@ +--- Imakefile.orig Sun Dec 14 05:04:11 2003 ++++ Imakefile Tue Jul 6 00:39:39 2004 +@@ -103,7 +103,7 @@ # RasMol's on-line help direcory # e.g. /usr/local/lib/rasmol/rasmol.hlp -RASMOLDIR = $(USRLIBDIR)/rasmol/ -+RASMOLDIR = $(PREFIX)/lib/X11/rasmol/ ++RASMOLDIR = $(LIBDIR)/rasmol/ -@@ -104,8 +104,8 @@ - ComplexProgramTarget(rasmol) - MakeDirectories(install,$(RASMOLDIR)) - InstallNonExec(rasmol.hlp,$(RASMOLDIR)) --InstallNonExec(data/1crn.pdb,$(RASMOLDIR)) --InstallNonExec(data/3cro.pdb,$(RASMOLDIR)) -+InstallNonExec(../data/1crn.pdb,$(RASMOLDIR)) -+InstallNonExec(../data/3cro.pdb,$(RASMOLDIR)) - --rasmol.man:: doc/rasmol.1 -- ln -s doc/rasmol.1 rasmol.man -+rasmol.man:: -+ gunzip -c ../doc/rasmol.1.gz > rasmol.man +@@ -168,7 +168,7 @@ + InstallNonExec(../data/3cro.pdb,$(RASMOLDIR)) + + rasmol.man:: ../doc/rasmol.1 +- ln -s ../doc/rasmol.1 rasmol.man ++ gunzip <../doc/rasmol.1.gz > rasmol.man + + ../doc/rasmol.1: ../doc/rasmol.1.gz + gunzip <../doc/rasmol.1.gz > ../doc/rasmol.1 diff -urN /usr/ports/biology/rasmol/pkg-descr biology/rasmol/pkg-descr --- /usr/ports/biology/rasmol/pkg-descr Sat Mar 9 05:50:08 2002 +++ biology/rasmol/pkg-descr Fri Jul 9 23:46:49 2004 @@ -1,8 +1,8 @@ - RasMol is a molecular graphics program intended for the visualisation -of proteins, nucleic acids and small molecules. The program is aimed at -display, teaching and generation of publication quality images. The program -has been developed at the University of Edinburgh's Biocomputing Research -Unit and the Biomolecular Structures Group at Glaxo Research and Development, -Greenford, UK. +RasMol is a molecular graphics program intended for the visualisation +of proteins, nucleic acids and small molecules. The program is aimed at +display, teaching and generation of publication quality images. The +program has been developed at the University of Edinburgh's Biocomputing +Research Unit and the Biomolecular Structures Group at Glaxo Research +and Development, Greenford, UK. -WWW: http://www.umass.edu/microbio/rasmol/index2.htm +WWW: http://www.rasmol.org/ diff -urN /usr/ports/biology/rasmol/pkg-plist biology/rasmol/pkg-plist --- /usr/ports/biology/rasmol/pkg-plist Fri Sep 7 06:25:13 2001 +++ biology/rasmol/pkg-plist Thu Jan 1 09:00:00 1970 @@ -1,8 +0,0 @@ -bin/rasmol -bin/rasmol-16 -bin/rasmol-32 -bin/rasmol-8 -lib/X11/rasmol/1crn.pdb -lib/X11/rasmol/3cro.pdb -lib/X11/rasmol/rasmol.hlp -@dirrm lib/X11/rasmol >Release-Note: >Audit-Trail: >Unformatted:
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