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Sat, 1 Oct 2022 15:09:18 GMT (envelope-from git) Date: Sat, 1 Oct 2022 15:09:18 GMT Message-Id: <202210011509.291F9I55062243@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-branches@FreeBSD.org From: Yuri Victorovich Subject: git: d25d388b58d3 - 2022Q4 - biology/hhsuite: fix build on armv7 List-Id: Commits to the quarterly branches of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-branches List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-branches@freebsd.org X-BeenThere: dev-commits-ports-branches@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/2022Q4 X-Git-Reftype: branch X-Git-Commit: d25d388b58d3335a9ef91335aca0a12225999741 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; 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mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch 2022Q4 has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=d25d388b58d3335a9ef91335aca0a12225999741 commit d25d388b58d3335a9ef91335aca0a12225999741 Author: Robert Clausecker AuthorDate: 2022-10-01 15:06:43 +0000 Commit: Yuri Victorovich CommitDate: 2022-10-01 15:09:13 +0000 biology/hhsuite: fix build on armv7 PR: 266736 (cherry picked from commit 75d814716539317715472ded1bb11b3c6ccb72bc) --- biology/hhsuite/Makefile | 2 -- biology/hhsuite/files/patch-lib_simde_simde_x86_sse2.h | 11 +++++++++++ 2 files changed, 11 insertions(+), 2 deletions(-) diff --git a/biology/hhsuite/Makefile b/biology/hhsuite/Makefile index 7686f86e7278..60e0fcb6ad66 100644 --- a/biology/hhsuite/Makefile +++ b/biology/hhsuite/Makefile @@ -11,8 +11,6 @@ WWW= https://github.com/soedinglab/hh-suite LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE -BROKEN_armv7= compilation fails: no member named 'neon_f64' in 'simde__m128d_private', see https://github.com/soedinglab/hh-suite/issues/322 - LIB_DEPENDS= libmpi.so:net/openmpi USES= compiler:c++11-lang cmake perl5 python shebangfix diff --git a/biology/hhsuite/files/patch-lib_simde_simde_x86_sse2.h b/biology/hhsuite/files/patch-lib_simde_simde_x86_sse2.h new file mode 100644 index 000000000000..898d98065043 --- /dev/null +++ b/biology/hhsuite/files/patch-lib_simde_simde_x86_sse2.h @@ -0,0 +1,11 @@ +--- lib/simde/simde/x86/sse2.h.orig 2022-10-01 09:24:35 UTC ++++ lib/simde/simde/x86/sse2.h +@@ -6591,7 +6591,7 @@ simde_x_mm_negate_pd(simde__m128d a) { + + #if defined(SIMDE_POWER_ALTIVEC_P9_NATIVE) + r_.altivec_f64 = vec_neg(a_.altivec_f64); +- #elif defined(SIMDE_ARM_NEON_A32V7_NATIVE) ++ #elif defined(SIMDE_ARM_NEON_A64V8_NATIVE) + r_.neon_f64 = vnegq_f64(a_.neon_f64); + #elif defined(SIMDE_WASM_SIMD128d_NATIVE) + r_.wasm_v128d = wasm_f64x2_neg(a_.wasm_v128d);